RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 TMEM14BQ9NUH8 114 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 METRNQ9UJH8 293 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 SELENOKQ9Y6D0 94 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 SMKR1H3BMG3 65 aa10.52□□□□□ -0.72
RNF43-201ENST00000407977 NPC2P61916 151 aa10.52□□□□□ -0.72
RNF43-201ENST00000407977 C6orf226Q5I0X4 101 aa10.52□□□□□ -0.72
RNF43-201ENST00000407977 LHFPL4Q7Z7J7 247 aa10.52□□□□□ -0.72
RNF43-201ENST00000407977 CHD5Q8TDI0 1954 aa10.52□□□□□ -0.73
RNF43-201ENST00000407977 V9GYV3 84 aa10.52□□□□□ -0.73
RNF43-201ENST00000407977 PAX9P55771 341 aa10.52□□□□□ -0.73
RNF43-201ENST00000407977 C11orf52Q96A22 123 aa10.52□□□□□ -0.73
RNF43-201ENST00000407977 NRXN2Q9P2S2 1712 aa10.52□□□□□ -0.73
RNF43-201ENST00000407977 NYNRINQ9P2P1 1898 aaKnown RBP10.52□□□□□ -0.73
RNF43-201ENST00000407977 IGKV1D-17A0A075B6S4 117 aa10.52□□□□□ -0.73
RNF43-201ENST00000407977 CRIPAKQ8N1N5 446 aa10.52□□□□□ -0.73
RNF43-201ENST00000407977 SOCS3O14543 225 aa10.51□□□□□ -0.73
RNF43-201ENST00000407977 IGLL1P15814 213 aa10.51□□□□□ -0.73
RNF43-201ENST00000407977 LINC00479Q96M42 142 aa10.51□□□□□ -0.73
RNF43-201ENST00000407977 COLQQ9Y215 455 aaPredicted RBP10.51□□□□□ -0.73
RNF43-201ENST00000407977 PSME4Q14997 1843 aa10.51□□□□□ -0.73
RNF43-201ENST00000407977 LMO1P25800 156 aa10.51□□□□□ -0.73
RNF43-201ENST00000407977 MCRIP2Q9BUT9 160 aaKnown RBP10.51□□□□□ -0.73
RNF43-201ENST00000407977 DSCR9P59020 149 aa10.51□□□□□ -0.73
RNF43-201ENST00000407977 SDK2Q58EX2 2172 aa10.51□□□□□ -0.73
RNF43-201ENST00000407977 A0A1W2PPM0 123 aa10.51□□□□□ -0.73
RNF43-201ENST00000407977 ETDBQ3ZM63 59 aa10.51□□□□□ -0.73
RNF43-201ENST00000407977 AKAP6Q13023 2319 aa10.51□□□□□ -0.73
RNF43-201ENST00000407977 RHODO00212 210 aa10.5□□□□□ -0.73
RNF43-201ENST00000407977 PRB3Q04118 309 aaPredicted RBP10.5□□□□□ -0.73
RNF43-201ENST00000407977 PMVKQ15126 192 aa10.5□□□□□ -0.73
RNF43-201ENST00000407977 C2orf66Q6UXQ4 117 aa10.5□□□□□ -0.73
RNF43-201ENST00000407977 ATP6V0BQ99437 205 aa10.5□□□□□ -0.73
RNF43-201ENST00000407977 PDCD11Q14690 1871 aaKnown RBP10.5□□□□□ -0.73
RNF43-201ENST00000407977 C20orf204Q6ZNR8 217 aa10.5□□□□□ -0.73
RNF43-201ENST00000407977 IGKV1-6A0A0C4DH72 117 aa10.5□□□□□ -0.73
RNF43-201ENST00000407977 BVES-AS1Q5T3Y7 98 aa10.5□□□□□ -0.73
RNF43-201ENST00000407977 SPXQ9BT56 116 aa10.5□□□□□ -0.73
RNF43-201ENST00000407977 BRCA1P38398 1863 aaKnown RBP10.5□□□□□ -0.73
RNF43-201ENST00000407977 LYNX1G3V0Z9 82 aa10.5□□□□□ -0.73
RNF43-201ENST00000407977 LYNX1P0DP58 116 aa10.5□□□□□ -0.73
RNF43-201ENST00000407977 C1orf159Q96HA4 380 aa10.5□□□□□ -0.73
RNF43-201ENST00000407977 VGLL1Q99990 258 aa10.5□□□□□ -0.73
RNF43-201ENST00000407977 LRRK1Q38SD2 2015 aa10.49□□□□□ -0.73
RNF43-201ENST00000407977 A0A1B0GUS0 222 aa10.49□□□□□ -0.73
RNF43-201ENST00000407977 C1orf122Q6ZSJ8 110 aa10.49□□□□□ -0.73
RNF43-201ENST00000407977 C1QTNF4Q9BXJ3 329 aa10.49□□□□□ -0.73
RNF43-201ENST00000407977 IFITM1P13164 125 aa10.49□□□□□ -0.73
RNF43-201ENST00000407977 ZNF726P1Q15940 193 aa10.49□□□□□ -0.73
RNF43-201ENST00000407977 PRR31Q5SQ13 230 aa10.49□□□□□ -0.73
RNF43-201ENST00000407977 ARHGEF17Q96PE2 2063 aaPredicted RBP10.49□□□□□ -0.73
RNF43-201ENST00000407977 GAGE12HA6NDE8 117 aa10.49□□□□□ -0.73
RNF43-201ENST00000407977 LTBRP36941 435 aa10.49□□□□□ -0.73
RNF43-201ENST00000407977 EFNA4P52798 201 aa10.49□□□□□ -0.73
RNF43-201ENST00000407977 C1orf147Q96MC9 270 aaPredicted RBP10.49□□□□□ -0.73
RNF43-201ENST00000407977 ZNF581Q9P0T4 197 aa10.49□□□□□ -0.73
RNF43-201ENST00000407977 INSP01308 110 aa10.49□□□□□ -0.73
RNF43-201ENST00000407977 CFHR2P36980 270 aa10.49□□□□□ -0.73
RNF43-201ENST00000407977 TMEM14CQ9P0S9 112 aa10.49□□□□□ -0.73
RNF43-201ENST00000407977 TRBV19A0A075B6N1 114 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 ETV2O00321 342 aaPredicted RBP10.48□□□□□ -0.73
RNF43-201ENST00000407977 SRD5A1P18405 259 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 B3GALT5-AS1P59052 145 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 KLHDC3Q9BQ90 382 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 MPDZO75970 2070 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 A0A1W2PPI3 338 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.48□□□□□ -0.73
RNF43-201ENST00000407977 IL17RELQ6ZVW7 336 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 NDUFA4L2Q9NRX3 87 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 TRGV1A0A0A0MS02 117 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 TMEM213A2RRL7 107 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 F8WEM9 126 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 C5orf24Q7Z6I8 188 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 TP53TG1Q9Y2A0 90 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 PLXNA1Q9UIW2 1896 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 FCN3O75636 299 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 SLC25A16P16260 332 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 LYPD6BQ8NI32 183 aa10.48□□□□□ -0.73
RNF43-201ENST00000407977 KLF2Q9Y5W3 355 aaPredicted RBP10.48□□□□□ -0.73
RNF43-201ENST00000407977 IGKV1-16P04430 117 aa10.47□□□□□ -0.73
RNF43-201ENST00000407977 CSRP1P21291 193 aaKnown RBP10.47□□□□□ -0.73
RNF43-201ENST00000407977 COA6Q5JTJ3 125 aaKnown RBP10.47□□□□□ -0.73
RNF43-201ENST00000407977 CYYR1Q96J86 154 aa10.47□□□□□ -0.73
RNF43-201ENST00000407977 PRO1854Q9UHT4 67 aa10.47□□□□□ -0.73
RNF43-201ENST00000407977 A0A1W2PRX2 142 aa10.47□□□□□ -0.73
RNF43-201ENST00000407977 SS18Q15532 418 aa10.47□□□□□ -0.73
RNF43-201ENST00000407977 MLANAQ16655 118 aa10.47□□□□□ -0.73
RNF43-201ENST00000407977 DAZ1Q9NQZ3 744 aaKnown RBP10.47□□□□□ -0.73
RNF43-201ENST00000407977 MRPL51Q4U2R6 128 aaKnown RBP10.47□□□□□ -0.73
RNF43-201ENST00000407977 CEND1Q8N111 149 aa10.47□□□□□ -0.73
RNF43-201ENST00000407977 WFDC12Q8WWY7 111 aa10.47□□□□□ -0.73
RNF43-201ENST00000407977 RHPN1-AS1Q9BWJ2 59 aa10.47□□□□□ -0.73
RNF43-201ENST00000407977 MBD3L4A6NDZ8 208 aaPredicted RBP10.46□□□□□ -0.73
RNF43-201ENST00000407977 MBD3L3A6NE82 208 aaPredicted RBP10.46□□□□□ -0.73
RNF43-201ENST00000407977 MBD3L5A6NJ08 208 aaPredicted RBP10.46□□□□□ -0.73
RNF43-201ENST00000407977 HLA-DRB4P13762 266 aa10.46□□□□□ -0.73
RNF43-201ENST00000407977 MBD3L2Q8NHZ7 208 aaPredicted RBP10.46□□□□□ -0.73
RNF43-201ENST00000407977 HLA-DRB4X5D2U9 266 aa10.46□□□□□ -0.73
RNF43-201ENST00000407977 GREB1Q4ZG55 1949 aa10.46□□□□□ -0.73
RNF43-201ENST00000407977 SLX1AQ9BQ83 275 aa10.46□□□□□ -0.73
RNF43-201ENST00000407977 UBL5Q9BZL1 73 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms