RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 TMEM30BQ3MIR4 351 aa12□□□□□ -0.49
ATG4B-206ENST00000405546 TMEM97Q5BJF2 176 aa12□□□□□ -0.49
ATG4B-206ENST00000405546 FAM71F2Q6NXP2 309 aa12□□□□□ -0.49
ATG4B-206ENST00000405546 ASH1LQ9NR48 2969 aaKnown RBP12□□□□□ -0.49
ATG4B-206ENST00000405546 TMSB15BA0A087X1C1 80 aa11.99□□□□□ -0.49
ATG4B-206ENST00000405546 IGF2-ASQ6U949 168 aa11.99□□□□□ -0.49
ATG4B-206ENST00000405546 CIARTQ8N365 385 aaPredicted RBP11.99□□□□□ -0.49
ATG4B-206ENST00000405546 DAZAP1Q96EP5 407 aaKnown RBP11.99□□□□□ -0.49
ATG4B-206ENST00000405546 MRPL32Q9BYC8 188 aaKnown RBP11.99□□□□□ -0.49
ATG4B-206ENST00000405546 APOHP02749 345 aaPredicted RBP11.99□□□□□ -0.49
ATG4B-206ENST00000405546 NBEAP1P0C6P0 100 aa11.99□□□□□ -0.49
ATG4B-206ENST00000405546 FAM167A-AS1Q96KT0 104 aa11.99□□□□□ -0.49
ATG4B-206ENST00000405546 HLA-DRB1P01911 266 aa11.99□□□□□ -0.49
ATG4B-206ENST00000405546 C2orf91Q6ZV80 131 aa11.99□□□□□ -0.49
ATG4B-206ENST00000405546 ZNF329Q86UD4 541 aa11.99□□□□□ -0.49
ATG4B-206ENST00000405546 RABAC1Q9UI14 185 aa11.99□□□□□ -0.49
ATG4B-206ENST00000405546 SERTM2A0A1B0GWG4 89 aa11.98□□□□□ -0.49
ATG4B-206ENST00000405546 CGB1A6NKQ9 187 aa11.98□□□□□ -0.49
ATG4B-206ENST00000405546 FNDC10F2Z333 226 aa11.98□□□□□ -0.49
ATG4B-206ENST00000405546 P01737 135 aa11.98□□□□□ -0.49
ATG4B-206ENST00000405546 OR5AL1P0C617 328 aa11.98□□□□□ -0.49
ATG4B-206ENST00000405546 ATP5IP56385 69 aaPredicted RBP11.98□□□□□ -0.49
ATG4B-206ENST00000405546 PLP1P60201 277 aa11.98□□□□□ -0.49
ATG4B-206ENST00000405546 HIST1H1AQ02539 215 aaPredicted RBP11.98□□□□□ -0.49
ATG4B-206ENST00000405546 LOXL1Q08397 574 aaPredicted RBP11.98□□□□□ -0.49
ATG4B-206ENST00000405546 LINC00574Q9H8X3 128 aa11.98□□□□□ -0.49
ATG4B-206ENST00000405546 SHISA9B4DS77 424 aa11.98□□□□□ -0.49
ATG4B-206ENST00000405546 LGALS7P47929 136 aa11.98□□□□□ -0.49
ATG4B-206ENST00000405546 PAX2Q02962 417 aa11.98□□□□□ -0.49
ATG4B-206ENST00000405546 TMEM155Q4W5P6 130 aa11.98□□□□□ -0.49
ATG4B-206ENST00000405546 KIR3DS1Q14943 382 aa11.98□□□□□ -0.49
ATG4B-206ENST00000405546 CCL21O00585 134 aa11.97□□□□□ -0.49
ATG4B-206ENST00000405546 KLF17Q5JT82 389 aaPredicted RBP11.97□□□□□ -0.49
ATG4B-206ENST00000405546 PPP1R27Q86WC6 154 aa11.97□□□□□ -0.49
ATG4B-206ENST00000405546 OR10AG1Q8NH19 301 aa11.97□□□□□ -0.49
ATG4B-206ENST00000405546 C22orf46C9J442 243 aa11.97□□□□□ -0.49
ATG4B-206ENST00000405546 IGLV2-23P01705 113 aa11.97□□□□□ -0.49
ATG4B-206ENST00000405546 PRSS3P2Q8NHM4 247 aa11.97□□□□□ -0.49
ATG4B-206ENST00000405546 KLF5Q13887 457 aaPredicted RBP11.96□□□□□ -0.49
ATG4B-206ENST00000405546 SPCS1Q9Y6A9 102 aa11.96□□□□□ -0.49
ATG4B-206ENST00000405546 A0A0G2JLM5 398 aa11.96□□□□□ -0.49
ATG4B-206ENST00000405546 K7ERJ3 54 aa11.96□□□□□ -0.49
ATG4B-206ENST00000405546 OR2K2Q8NGT1 345 aa11.96□□□□□ -0.49
ATG4B-206ENST00000405546 IGHV1-3A0A0C4DH29 117 aa11.96□□□□□ -0.5
ATG4B-206ENST00000405546 COL8A1P27658 744 aa11.96□□□□□ -0.5
ATG4B-206ENST00000405546 PRNTQ86SH4 94 aa11.96□□□□□ -0.5
ATG4B-206ENST00000405546 PCP2Q8IVA1 136 aa11.96□□□□□ -0.5
ATG4B-206ENST00000405546 IGKV1D-37A0A075B6S9 117 aa11.95□□□□□ -0.5
ATG4B-206ENST00000405546 NCBP2LA6PVI3 153 aaKnown RBP11.95□□□□□ -0.5
ATG4B-206ENST00000405546 B9A039 149 aa11.95□□□□□ -0.5
ATG4B-206ENST00000405546 SAMD13Q5VXD3 122 aa11.95□□□□□ -0.5
ATG4B-206ENST00000405546 RASL11BQ9BPW5 248 aa11.95□□□□□ -0.5
ATG4B-206ENST00000405546 EPDR1Q9UM22 224 aa11.95□□□□□ -0.5
ATG4B-206ENST00000405546 SIGLEC9Q9Y336 463 aa11.95□□□□□ -0.5
ATG4B-206ENST00000405546 GTF2H5Q6ZYL4 71 aa11.95□□□□□ -0.5
ATG4B-206ENST00000405546 FXYD5Q96DB9 178 aa11.95□□□□□ -0.5
ATG4B-206ENST00000405546 C18orf15Q96N68 181 aa11.95□□□□□ -0.5
ATG4B-206ENST00000405546 RPP21Q9H633 154 aaKnown RBP11.95□□□□□ -0.5
ATG4B-206ENST00000405546 EXOC3-AS1Q8N2X6 119 aa11.94□□□□□ -0.5
ATG4B-206ENST00000405546 SRSF12Q8WXF0 261 aaKnown RBP11.94□□□□□ -0.5
ATG4B-206ENST00000405546 TEX48A0A1B0GUV7 120 aa11.94□□□□□ -0.5
ATG4B-206ENST00000405546 LIPFP07098 398 aa11.94□□□□□ -0.5
ATG4B-206ENST00000405546 C1RLQ9NZP8 487 aa11.94□□□□□ -0.5
ATG4B-206ENST00000405546 SVEP1Q4LDE5 3571 aa11.94□□□□□ -0.5
ATG4B-206ENST00000405546 IGHV3-35A0A0C4DH35 117 aa11.94□□□□□ -0.5
ATG4B-206ENST00000405546 CIDEAO60543 219 aa11.94□□□□□ -0.5
ATG4B-206ENST00000405546 OR2J3O76001 311 aa11.94□□□□□ -0.5
ATG4B-206ENST00000405546 GCSHP23434 173 aa11.94□□□□□ -0.5
ATG4B-206ENST00000405546 CACNG7P62955 275 aa11.94□□□□□ -0.5
ATG4B-206ENST00000405546 HIGD1AQ9Y241 93 aa11.94□□□□□ -0.5
ATG4B-206ENST00000405546 G3V4G9 280 aa11.93□□□□□ -0.5
ATG4B-206ENST00000405546 BUB1B-PAK6H3BSN5 160 aa11.93□□□□□ -0.5
ATG4B-206ENST00000405546 TIMM23O14925 209 aa11.93□□□□□ -0.5
ATG4B-206ENST00000405546 ARMS2P0C7Q2 107 aa11.93□□□□□ -0.5
ATG4B-206ENST00000405546 KLRD1Q13241 179 aa11.93□□□□□ -0.5
ATG4B-206ENST00000405546 GOLT1AQ6ZVE7 132 aa11.93□□□□□ -0.5
ATG4B-206ENST00000405546 FA2HQ7L5A8 372 aa11.93□□□□□ -0.5
ATG4B-206ENST00000405546 AP5S1Q9NUS5 200 aa11.93□□□□□ -0.5
ATG4B-206ENST00000405546 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.93□□□□□ -0.55e-8■■■■■ 29.2
ATG4B-206ENST00000405546 IGHV3OR16-8A0A075B7F1 116 aa11.93□□□□□ -0.5
ATG4B-206ENST00000405546 A8MWL6 223 aa11.93□□□□□ -0.5
ATG4B-206ENST00000405546 IFI27P40305 119 aaPredicted RBP11.93□□□□□ -0.5
ATG4B-206ENST00000405546 Q9H3A6 140 aa11.93□□□□□ -0.5
ATG4B-206ENST00000405546 COL12A1Q99715 3063 aa11.93□□□□□ -0.5
ATG4B-206ENST00000405546 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.92□□□□□ -0.5
ATG4B-206ENST00000405546 A0A1B0GXF2 115 aa11.92□□□□□ -0.5
ATG4B-206ENST00000405546 IGHV3-23P01764 117 aa11.92□□□□□ -0.5
ATG4B-206ENST00000405546 COX8AP10176 69 aa11.92□□□□□ -0.5
ATG4B-206ENST00000405546 AZU1P20160 251 aa11.92□□□□□ -0.5
ATG4B-206ENST00000405546 ZNF672Q499Z4 452 aaPredicted RBP11.92□□□□□ -0.5
ATG4B-206ENST00000405546 STXBP6Q8NFX7 210 aa11.92□□□□□ -0.5
ATG4B-206ENST00000405546 WIPF2Q8TF74 440 aaPredicted RBP11.92□□□□□ -0.5
ATG4B-206ENST00000405546 LCNL1Q6ZST4 164 aa11.92□□□□□ -0.5
ATG4B-206ENST00000405546 SMKR1H3BMG3 65 aa11.92□□□□□ -0.5
ATG4B-206ENST00000405546 DCHS2Q6V1P9 2916 aa11.91□□□□□ -0.5
ATG4B-206ENST00000405546 PRSS47A8MTI9 375 aa11.91□□□□□ -0.5
ATG4B-206ENST00000405546 LINC00311Q8N616 119 aa11.91□□□□□ -0.5
ATG4B-206ENST00000405546 PSMB11A5LHX3 300 aa11.91□□□□□ -0.5
ATG4B-206ENST00000405546 C9orf118A6NHY6 69 aa11.91□□□□□ -0.5
ATG4B-206ENST00000405546 GPR82Q96P67 336 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms