RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 FXYD5Q96DB9 178 aa24.89■■□□□ 1.58
CSNK1E-204ENST00000403904 HIST1H1EP10412 219 aaKnown RBP24.88■■□□□ 1.57
CSNK1E-204ENST00000403904 ZMAT5Q9UDW3 170 aaKnown RBP24.88■■□□□ 1.57
CSNK1E-204ENST00000403904 TRAV2A0A0B4J234 112 aa24.88■■□□□ 1.57
CSNK1E-204ENST00000403904 BLNKQ8WV28 456 aa24.88■■□□□ 1.57
CSNK1E-204ENST00000403904 PRR25Q96S07 402 aa24.88■■□□□ 1.57
CSNK1E-204ENST00000403904 MEOX2P50222 304 aa24.87■■□□□ 1.57
CSNK1E-204ENST00000403904 UBE2L3P68036 154 aaKnown RBP24.87■■□□□ 1.57
CSNK1E-204ENST00000403904 MAP1LC3B2A6NCE7 125 aa24.86■■□□□ 1.57
CSNK1E-204ENST00000403904 SOCS3O14543 225 aa24.86■■□□□ 1.57
CSNK1E-204ENST00000403904 CD7P09564 240 aa24.86■■□□□ 1.57
CSNK1E-204ENST00000403904 FGF8P55075 233 aaPredicted RBP24.86■■□□□ 1.57
CSNK1E-204ENST00000403904 KPRPQ5T749 579 aaPredicted RBP24.86■■□□□ 1.57
CSNK1E-204ENST00000403904 C16orf92Q96LL3 132 aa24.86■■□□□ 1.57
CSNK1E-204ENST00000403904 MAP1LC3BQ9GZQ8 125 aa24.86■■□□□ 1.57
CSNK1E-204ENST00000403904 CXorf1O96002 111 aa24.85■■□□□ 1.57
CSNK1E-204ENST00000403904 NBEAP1P0C6P0 100 aa24.85■■□□□ 1.57
CSNK1E-204ENST00000403904 TEX261Q6UWH6 196 aa24.85■■□□□ 1.57
CSNK1E-204ENST00000403904 LRRC20Q8TCA0 184 aa24.85■■□□□ 1.57
CSNK1E-204ENST00000403904 TRBV19A0A075B6N1 114 aa24.84■■□□□ 1.57
CSNK1E-204ENST00000403904 SLC17A3O00476 420 aa24.84■■□□□ 1.57
CSNK1E-204ENST00000403904 IGFL4Q6B9Z1 124 aa24.84■■□□□ 1.57
CSNK1E-204ENST00000403904 SFT2D1Q8WV19 159 aa24.84■■□□□ 1.57
CSNK1E-204ENST00000403904 SAT2Q96F10 170 aaPredicted RBP24.84■■□□□ 1.57
CSNK1E-204ENST00000403904 ZNF688P0C7X2 276 aa24.84■■□□□ 1.57
CSNK1E-204ENST00000403904 CD81P60033 236 aa24.84■■□□□ 1.57
CSNK1E-204ENST00000403904 GUK1Q16774 197 aa24.84■■□□□ 1.57
CSNK1E-204ENST00000403904 H2AFB1P0C5Y9 115 aa24.83■■□□□ 1.57
CSNK1E-204ENST00000403904 GCHFRP30047 84 aa24.83■■□□□ 1.57
CSNK1E-204ENST00000403904 GTSCR1Q86UQ5 136 aa24.83■■□□□ 1.57
CSNK1E-204ENST00000403904 IQCF2Q8IXL9 164 aa24.83■■□□□ 1.57
CSNK1E-204ENST00000403904 MBD3L1Q8WWY6 194 aa24.83■■□□□ 1.57
CSNK1E-204ENST00000403904 UBQLN2Q9UHD9 624 aa24.83■■□□□ 1.57
CSNK1E-204ENST00000403904 TRAV8-2A0A0B4J237 113 aa24.81■■□□□ 1.56
CSNK1E-204ENST00000403904 A0A1B0GV50 99 aa24.81■■□□□ 1.56
CSNK1E-204ENST00000403904 ZNF705EA8MWA4 302 aaPredicted RBP24.81■■□□□ 1.56
CSNK1E-204ENST00000403904 ISLRO14498 428 aa24.81■■□□□ 1.56
CSNK1E-204ENST00000403904 ODF3L2Q3SX64 289 aa24.81■■□□□ 1.56
CSNK1E-204ENST00000403904 ZNF680Q8NEM1 530 aa24.81■■□□□ 1.56
CSNK1E-204ENST00000403904 TMPRSS5Q9H3S3 457 aa24.81■■□□□ 1.56
CSNK1E-204ENST00000403904 ZNF331Q9NQX6 463 aaPredicted RBP24.81■■□□□ 1.56
CSNK1E-204ENST00000403904 NDUFB4O95168 129 aa24.8■■□□□ 1.56
CSNK1E-204ENST00000403904 ID1P41134 155 aa24.8■■□□□ 1.56
CSNK1E-204ENST00000403904 SAMD13Q5VXD3 122 aa24.8■■□□□ 1.56
CSNK1E-204ENST00000403904 PRB2P02812 416 aaPredicted RBP24.8■■□□□ 1.56
CSNK1E-204ENST00000403904 PSMB3P49720 205 aa24.8■■□□□ 1.56
CSNK1E-204ENST00000403904 SNRPD3P62318 126 aaKnown RBP24.8■■□□□ 1.56
CSNK1E-204ENST00000403904 RNF182Q8N6D2 247 aa24.8■■□□□ 1.56
CSNK1E-204ENST00000403904 LINC00052Q96N35 136 aa24.8■■□□□ 1.56
CSNK1E-204ENST00000403904 MAP6D1Q9H9H5 199 aa24.8■■□□□ 1.56
CSNK1E-204ENST00000403904 HLA-DMBP28068 263 aa24.79■■□□□ 1.56
CSNK1E-204ENST00000403904 PDE6HQ13956 83 aa24.79■■□□□ 1.56
CSNK1E-204ENST00000403904 PSMG4Q5JS54 123 aa24.79■■□□□ 1.56
CSNK1E-204ENST00000403904 SLC50A1Q9BRV3 221 aa24.79■■□□□ 1.56
CSNK1E-204ENST00000403904 C20orf173Q96LM9 149 aa24.78■■□□□ 1.56
CSNK1E-204ENST00000403904 C19orf73Q9NVV2 129 aa24.78■■□□□ 1.56
CSNK1E-204ENST00000403904 ZNF253O75346 499 aa24.77■■□□□ 1.56
CSNK1E-204ENST00000403904 DEFB131AP59861 70 aa24.77■■□□□ 1.56
CSNK1E-204ENST00000403904 Q8N1Y9 231 aa24.77■■□□□ 1.56
CSNK1E-204ENST00000403904 WFDC10AQ9H1F0 79 aa24.77■■□□□ 1.56
CSNK1E-204ENST00000403904 TMEM167BQ9NRX6 74 aa24.77■■□□□ 1.56
CSNK1E-204ENST00000403904 RANP62826 216 aaKnown RBP24.76■■□□□ 1.55
CSNK1E-204ENST00000403904 SUN5Q8TC36 379 aa24.76■■□□□ 1.55
CSNK1E-204ENST00000403904 OR11H12B2RN74 326 aa24.76■■□□□ 1.55
CSNK1E-204ENST00000403904 IFNA7P01567 189 aa24.76■■□□□ 1.55
CSNK1E-204ENST00000403904 APRG1Q8IVJ8 170 aa24.76■■□□□ 1.55
CSNK1E-204ENST00000403904 PSG9Q00887 426 aa24.75■■□□□ 1.55
CSNK1E-204ENST00000403904 ZNF124Q15973 351 aa24.75■■□□□ 1.55
CSNK1E-204ENST00000403904 EXOC3-AS1Q8N2X6 119 aa24.75■■□□□ 1.55
CSNK1E-204ENST00000403904 AURKAIP1Q9NWT8 199 aaPredicted RBP24.74■■□□□ 1.55
CSNK1E-204ENST00000403904 CMC4P56277 68 aaPredicted RBP24.73■■□□□ 1.55
CSNK1E-204ENST00000403904 FAM110AQ9BQ89 295 aa24.73■■□□□ 1.55
CSNK1E-204ENST00000403904 DEFB1P60022 68 aa24.72■■□□□ 1.55
CSNK1E-204ENST00000403904 DEFB125Q8N687 156 aa24.72■■□□□ 1.55
CSNK1E-204ENST00000403904 TRAV1-1A0A0B4J248 108 aa24.71■■□□□ 1.55
CSNK1E-204ENST00000403904 PRB4P10163 310 aaPredicted RBP24.71■■□□□ 1.55
CSNK1E-204ENST00000403904 BLOC1S1P78537 153 aa24.71■■□□□ 1.55
CSNK1E-204ENST00000403904 CCL20P78556 96 aa24.71■■□□□ 1.55
CSNK1E-204ENST00000403904 ICAM4Q14773 271 aa24.71■■□□□ 1.55
CSNK1E-204ENST00000403904 PSG3Q16557 428 aa24.71■■□□□ 1.55
CSNK1E-204ENST00000403904 Q9H3A6 140 aa24.71■■□□□ 1.55
CSNK1E-204ENST00000403904 AAMDCQ9H7C9 122 aa24.71■■□□□ 1.55
CSNK1E-204ENST00000403904 ZNF705FA8MVS1 300 aaPredicted RBP24.7■■□□□ 1.54
CSNK1E-204ENST00000403904 UBE2G2P60604 165 aa24.7■■□□□ 1.54
CSNK1E-204ENST00000403904 LYPD1Q8N2G4 141 aa24.7■■□□□ 1.54
CSNK1E-204ENST00000403904 ZNF738Q8NE65 137 aa24.7■■□□□ 1.54
CSNK1E-204ENST00000403904 TEX46H3BTG2 121 aa24.69■■□□□ 1.54
CSNK1E-204ENST00000403904 M0R3E3 92 aa24.69■■□□□ 1.54
CSNK1E-204ENST00000403904 HBE1P02100 147 aa24.69■■□□□ 1.54
CSNK1E-204ENST00000403904 IFITM2Q01629 132 aa24.69■■□□□ 1.54
CSNK1E-204ENST00000403904 PCNPQ8WW12 178 aaKnown RBP24.69■■□□□ 1.54
CSNK1E-204ENST00000403904 CLEC5AQ9NY25 188 aa24.68■■□□□ 1.54
CSNK1E-204ENST00000403904 AGRNO00468 2067 aa24.68■■□□□ 1.54
CSNK1E-204ENST00000403904 CITED4Q96RK1 184 aa24.67■■□□□ 1.54
CSNK1E-204ENST00000403904 PGPA6NDG6 321 aa24.67■■□□□ 1.54
CSNK1E-204ENST00000403904 F6UB75 175 aa24.67■■□□□ 1.54
CSNK1E-204ENST00000403904 OTORQ9NRC9 128 aa24.67■■□□□ 1.54
CSNK1E-204ENST00000403904 YTHDF2Q9Y5A9 579 aaKnown RBP24.67■■□□□ 1.54
CSNK1E-204ENST00000403904 KNCNA6PVL3 124 aa24.66■■□□□ 1.54
CSNK1E-204ENST00000403904 RPUSD4Q96CM3 377 aaKnown RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms