RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 IGHV3OR16-12A0A075B7B8 117 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 TEX48A0A1B0GUV7 120 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 IGSF23A1L1A6 192 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 PRR20EP86478 221 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 PRR20CP86479 221 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 PRR20DP86480 221 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 PRR20BP86481 221 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 PRR20AP86496 221 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 PSG3Q16557 428 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 ATP6V1FQ16864 119 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 C12orf74Q32Q52 190 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 Q6ZRG5 221 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 C1orf158Q8N1D5 194 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 ZNF738Q8NE65 137 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 OR11H7Q8NGC8 314 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 LRRC20Q8TCA0 184 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 CHAC2Q8WUX2 184 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 SLC50A1Q9BRV3 221 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 APLNQ9ULZ1 77 aa10.67□□□□□ -0.7
SMIM11A-203ENST00000399299 IGLL5B9A064 214 aa10.66□□□□□ -0.7
SMIM11A-203ENST00000399299 INMT-MINDY4F8WBC2 141 aa10.66□□□□□ -0.7
SMIM11A-203ENST00000399299 HBE1P02100 147 aa10.66□□□□□ -0.7
SMIM11A-203ENST00000399299 SPART-AS1P0CW21 52 aa10.66□□□□□ -0.7
SMIM11A-203ENST00000399299 RPL29P47914 159 aaKnown RBP10.66□□□□□ -0.7
SMIM11A-203ENST00000399299 OPCMLQ14982 345 aa10.66□□□□□ -0.7
SMIM11A-203ENST00000399299 C10orf113Q5VZT2 155 aa10.66□□□□□ -0.7
SMIM11A-203ENST00000399299 MIC13Q5XKP0 118 aa10.66□□□□□ -0.7
SMIM11A-203ENST00000399299 OR1L4Q8NGR5 311 aa10.66□□□□□ -0.7
SMIM11A-203ENST00000399299 PFDN5Q99471 154 aa10.66□□□□□ -0.7
SMIM11A-203ENST00000399299 RNF126Q9BV68 326 aa10.66□□□□□ -0.7
SMIM11A-203ENST00000399299 NMES1Q9C002 83 aa10.66□□□□□ -0.7
SMIM11A-203ENST00000399299 DNAJC4Q9NNZ3 241 aa10.66□□□□□ -0.7
SMIM11A-203ENST00000399299 BATF3Q9NR55 127 aa10.66□□□□□ -0.7
SMIM11A-203ENST00000399299 UBE2L5PA0A1B0GUS4 154 aa10.65□□□□□ -0.7
SMIM11A-203ENST00000399299 BAXQ07812 192 aa10.65□□□□□ -0.7
SMIM11A-203ENST00000399299 MORN5Q5VZ52 161 aa10.65□□□□□ -0.7
SMIM11A-203ENST00000399299 OR8A1Q8NGG7 326 aa10.65□□□□□ -0.7
SMIM11A-203ENST00000399299 MARVELD1Q9BSK0 173 aa10.65□□□□□ -0.7
SMIM11A-203ENST00000399299 ZNF331Q9NQX6 463 aaPredicted RBP10.65□□□□□ -0.7
SMIM11A-203ENST00000399299 VPS13DQ5THJ4 4388 aa10.65□□□□□ -0.7
SMIM11A-203ENST00000399299 IGHV4-4A0A075B6R2 117 aa10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 DEFB131BA0A096LNP1 70 aa10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 BOLA2-SMG1P6H3BVE0 249 aa10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 CRXO43186 299 aaPredicted RBP10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 MPDU1O75352 247 aa10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 INSP01308 110 aa10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 RLN2P04090 185 aa10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 IGLC2P0DOY2 106 aa10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 DEFA1P59665 94 aa10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 DEFA3P59666 94 aa10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 B2MP61769 119 aa10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 CYCSP99999 105 aaKnown RBP10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 SPINK13Q1W4C9 94 aa10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 RRN3P1Q2M238 152 aa10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 RPUSD4Q96CM3 377 aaKnown RBP10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 SLC39A9Q9NUM3 307 aa10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 DKK2Q9UBU2 259 aa10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 KMT2AQ03164 3969 aa10.64□□□□□ -0.71
SMIM11A-203ENST00000399299 LOC102723971A0A1B0GUV8 181 aa10.63□□□□□ -0.71
SMIM11A-203ENST00000399299 E5RGE8 158 aa10.63□□□□□ -0.71
SMIM11A-203ENST00000399299 M0R2Z0 102 aa10.63□□□□□ -0.71
SMIM11A-203ENST00000399299 SIX6O95475 246 aa10.63□□□□□ -0.71
SMIM11A-203ENST00000399299 HIST1H1AQ02539 215 aaPredicted RBP10.63□□□□□ -0.71
SMIM11A-203ENST00000399299 OXA1LQ15070 435 aa10.63□□□□□ -0.71
SMIM11A-203ENST00000399299 GUK1Q16774 197 aa10.63□□□□□ -0.71
SMIM11A-203ENST00000399299 ZNF767PQ75MW2 155 aa10.63□□□□□ -0.71
SMIM11A-203ENST00000399299 TMEM208Q9BTX3 173 aa10.63□□□□□ -0.71
SMIM11A-203ENST00000399299 SLC25A31Q9H0C2 315 aa10.63□□□□□ -0.71
SMIM11A-203ENST00000399299 PXMP4Q9Y6I8 212 aa10.63□□□□□ -0.71
SMIM11A-203ENST00000399299 FGF7P21781 194 aa10.62□□□□□ -0.71
SMIM11A-203ENST00000399299 EMP1P54849 157 aa10.62□□□□□ -0.71
SMIM11A-203ENST00000399299 FAM222AQ5U5X8 452 aa10.62□□□□□ -0.71
SMIM11A-203ENST00000399299 RPP25LQ8N5L8 163 aaKnown RBP10.62□□□□□ -0.71
SMIM11A-203ENST00000399299 SAT2Q96F10 170 aaPredicted RBP10.62□□□□□ -0.71
SMIM11A-203ENST00000399299 H3BQ15 152 aa10.61□□□□□ -0.71
SMIM11A-203ENST00000399299 SLC17A3O00476 420 aa10.61□□□□□ -0.71
SMIM11A-203ENST00000399299 ZNF253O75346 499 aa10.61□□□□□ -0.71
SMIM11A-203ENST00000399299 TSPOP30536 169 aa10.61□□□□□ -0.71
SMIM11A-203ENST00000399299 RHOBP62745 196 aa10.61□□□□□ -0.71
SMIM11A-203ENST00000399299 NHLH2Q02577 135 aa10.61□□□□□ -0.71
SMIM11A-203ENST00000399299 BAP18Q8IXM2 172 aa10.61□□□□□ -0.71
SMIM11A-203ENST00000399299 TMEM256Q8N2U0 113 aa10.61□□□□□ -0.71
SMIM11A-203ENST00000399299 OR5C1Q8NGR4 320 aa10.61□□□□□ -0.71
SMIM11A-203ENST00000399299 NIPSNAP3BQ9BS92 247 aa10.61□□□□□ -0.71
SMIM11A-203ENST00000399299 NPCDR1Q9BY65 106 aa10.61□□□□□ -0.71
SMIM11A-203ENST00000399299 OR5AC2Q9NZP5 309 aa10.61□□□□□ -0.71
SMIM11A-203ENST00000399299 YTHDF2Q9Y5A9 579 aaKnown RBP10.61□□□□□ -0.71
SMIM11A-203ENST00000399299 EPPK1P58107 5090 aaKnown RBP10.61□□□□□ -0.71
SMIM11A-203ENST00000399299 H0YIZ8 118 aa10.6□□□□□ -0.71
SMIM11A-203ENST00000399299 H2BFSP57053 126 aa10.6□□□□□ -0.71
SMIM11A-203ENST00000399299 LRRC37A5PQ49AS3 106 aa10.6□□□□□ -0.71
SMIM11A-203ENST00000399299 FAM210BQ96KR6 192 aa10.6□□□□□ -0.71
SMIM11A-203ENST00000399299 NDUFAF3Q9BU61 184 aa10.6□□□□□ -0.71
SMIM11A-203ENST00000399299 PPP1R14DQ9NXH3 145 aa10.6□□□□□ -0.71
SMIM11A-203ENST00000399299 TRAV12-2A0A075B6T6 113 aa10.59□□□□□ -0.71
SMIM11A-203ENST00000399299 TRAV5A0A0B4J249 113 aa10.59□□□□□ -0.71
SMIM11A-203ENST00000399299 SNRPCP09234 159 aaKnown RBP10.59□□□□□ -0.71
SMIM11A-203ENST00000399299 CDKN1BP46527 198 aa10.59□□□□□ -0.71
SMIM11A-203ENST00000399299 PPP1R1CQ8WVI7 109 aa10.59□□□□□ -0.71
SMIM11A-203ENST00000399299 TMEM14CQ9P0S9 112 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms