RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 C19orf71A6NCJ1 209 aa7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 MBNL2Q5VZF2 373 aaKnown RBP7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 IGFBPL1Q8WX77 278 aa7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 CCL17Q92583 94 aa7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 TMEM186Q96B77 213 aa7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 ZZEF1O43149 2961 aa7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 LTAP01374 205 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 Q86TA4 180 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 OSR1Q8TAX0 266 aaPredicted RBP7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 FMC1Q96HJ9 113 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 C16orf92Q96LL3 132 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 RAB9BQ9NP90 201 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 JKAMPQ9P055 326 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 DKK2Q9UBU2 259 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 ABCA4P78363 2273 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 FSTL3O95633 263 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 MYCNOSP40205 109 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 SEC11AP67812 179 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 RIGQ13278 110 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 CR1LQ2VPA4 569 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 FDCSPQ8NFU4 85 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 OR4C13Q8NGP0 309 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 MALRD1Q5VYJ5 2156 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 FCER1GP30273 86 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 STXBP6Q8NFX7 210 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 OR5AN1Q8NGI8 311 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 IGHV3OR16-8A0A075B7F1 116 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 G3V4G9 280 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 ZADH2Q8N4Q0 377 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 VSTM2AQ8TAG5 236 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 ZNF71Q9NQZ8 489 aaPredicted RBP7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 SIGLEC8Q9NYZ4 499 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 HIGD1AQ9Y241 93 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 SVEP1Q4LDE5 3571 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 TEX48A0A1B0GUV7 120 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 K7EP34 96 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 IGHV1-46P01743 117 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 ZNF414Q96IQ9 312 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 PRELID3AQ96N28 172 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 C8orf49Q96NF6 230 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 KLF12Q9Y4X4 402 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 SPTBN1Q01082 2364 aaKnown RBP7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 PPIAL4CA0A0B4J2A2 164 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 PPIAL4GP0DN37 164 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 FABP2P12104 132 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 PLGLAQ15195 96 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 IGFL4Q6B9Z1 124 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 LYZL1Q6UWQ5 148 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 LCNL1Q6ZST4 164 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 SPRY4Q9C004 299 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 X6R8D5 127 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 H3BRM9 83 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 LHBP01229 141 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 GP9P14770 177 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 SAMD13Q5VXD3 122 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 SLC25A15Q9Y619 301 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 SPTA1P02549 2419 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 PRSS1P07477 247 aa7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 FGF6P10767 208 aa7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 FCGR2BP31994 310 aaPredicted RBP7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 RPS20P60866 119 aaKnown RBP7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 FAM27E3Q08E93 113 aa7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 VMA21Q3ZAQ7 101 aa7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 TMEM200BQ69YZ2 307 aa7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 BCL6BQ8N143 479 aaPredicted RBP7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 TMEM133Q9H2Q1 129 aa7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 INSIG2Q9Y5U4 225 aa7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 SOX21Q9Y651 276 aaPredicted RBP7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 ZGRF1Q86YA3 2104 aa7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 IGLV1-44P01699 117 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 PPIFP30405 207 aaKnown RBP7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 CKS2P33552 79 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 RPL27AP46776 148 aaKnown RBP7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 UFSP1Q6NVU6 142 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 TMEM108Q6UXF1 575 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 ZNF788Q6ZQV5 615 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 Q8N1Y9 231 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 TMEM167AQ8TBQ9 72 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 NHP2Q9NX24 153 aaKnown RBP7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 SH3BGRL2Q9UJC5 107 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 TECTAO75443 2155 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 A0A096LNJ9 63 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 IGHV3-35A0A0C4DH35 117 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 A0A1W2PPM0 123 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 CT45A10P0DMU9 189 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 EVI2AP22794 236 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 FXYD2P54710 66 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 TWIST1Q15672 202 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 PSG3Q16557 428 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 KLF17Q5JT82 389 aaPredicted RBP7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 LYPD2Q6UXB3 125 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 IFI27L1Q96BM0 104 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 SLC25A39Q9BZJ4 359 aaPredicted RBP7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 NPFFR1Q9GZQ6 430 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 PSG8Q9UQ74 426 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 ZNF785A8K8V0 405 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 M0R296 226 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 ZNF833PQ6ZTB9 187 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 C8orf46Q8TAG6 207 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 RASL11BQ9BPW5 248 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms