RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 C19orf71A6NCJ1 209 aa7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 MBNL2Q5VZF2 373 aaKnown RBP7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 IGFBPL1Q8WX77 278 aa7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 CCL17Q92583 94 aa7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 TMEM186Q96B77 213 aa7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 ZZEF1O43149 2961 aa7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 LTAP01374 205 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 Q86TA4 180 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 OSR1Q8TAX0 266 aaPredicted RBP7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 FMC1Q96HJ9 113 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 C16orf92Q96LL3 132 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 RAB9BQ9NP90 201 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 JKAMPQ9P055 326 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 DKK2Q9UBU2 259 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 ABCA4P78363 2273 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 FSTL3O95633 263 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 MYCNOSP40205 109 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 SEC11AP67812 179 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 RIGQ13278 110 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 CR1LQ2VPA4 569 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 FDCSPQ8NFU4 85 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 OR4C13Q8NGP0 309 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 MALRD1Q5VYJ5 2156 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 FCER1GP30273 86 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 STXBP6Q8NFX7 210 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 OR5AN1Q8NGI8 311 aa7.86□□□□□ -1.15
PTCHD4-202ENST00000398738 IGHV3OR16-8A0A075B7F1 116 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 G3V4G9 280 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 ZADH2Q8N4Q0 377 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 VSTM2AQ8TAG5 236 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 ZNF71Q9NQZ8 489 aaPredicted RBP7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 SIGLEC8Q9NYZ4 499 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 HIGD1AQ9Y241 93 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 SVEP1Q4LDE5 3571 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 TEX48A0A1B0GUV7 120 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 K7EP34 96 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 IGHV1-46P01743 117 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 ZNF414Q96IQ9 312 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 PRELID3AQ96N28 172 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 C8orf49Q96NF6 230 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 KLF12Q9Y4X4 402 aa7.85□□□□□ -1.15
PTCHD4-202ENST00000398738 SPTBN1Q01082 2364 aaKnown RBP7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 PPIAL4CA0A0B4J2A2 164 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 PPIAL4GP0DN37 164 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 FABP2P12104 132 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 PLGLAQ15195 96 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 IGFL4Q6B9Z1 124 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 LYZL1Q6UWQ5 148 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 LCNL1Q6ZST4 164 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 SPRY4Q9C004 299 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 X6R8D5 127 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 H3BRM9 83 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 LHBP01229 141 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 GP9P14770 177 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 SAMD13Q5VXD3 122 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 SLC25A15Q9Y619 301 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 SPTA1P02549 2419 aa7.84□□□□□ -1.15
PTCHD4-202ENST00000398738 PRSS1P07477 247 aa7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 FGF6P10767 208 aa7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 FCGR2BP31994 310 aaPredicted RBP7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 RPS20P60866 119 aaKnown RBP7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 FAM27E3Q08E93 113 aa7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 VMA21Q3ZAQ7 101 aa7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 TMEM200BQ69YZ2 307 aa7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 BCL6BQ8N143 479 aaPredicted RBP7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 TMEM133Q9H2Q1 129 aa7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 INSIG2Q9Y5U4 225 aa7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 SOX21Q9Y651 276 aaPredicted RBP7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 ZGRF1Q86YA3 2104 aa7.84□□□□□ -1.16
PTCHD4-202ENST00000398738 IGLV1-44P01699 117 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 PPIFP30405 207 aaKnown RBP7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 CKS2P33552 79 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 RPL27AP46776 148 aaKnown RBP7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 UFSP1Q6NVU6 142 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 TMEM108Q6UXF1 575 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 ZNF788Q6ZQV5 615 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 Q8N1Y9 231 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 TMEM167AQ8TBQ9 72 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 NHP2Q9NX24 153 aaKnown RBP7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 SH3BGRL2Q9UJC5 107 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 TECTAO75443 2155 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 A0A096LNJ9 63 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 IGHV3-35A0A0C4DH35 117 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 A0A1W2PPM0 123 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 CT45A10P0DMU9 189 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 EVI2AP22794 236 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 FXYD2P54710 66 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 TWIST1Q15672 202 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 PSG3Q16557 428 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 KLF17Q5JT82 389 aaPredicted RBP7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 LYPD2Q6UXB3 125 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 IFI27L1Q96BM0 104 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 SLC25A39Q9BZJ4 359 aaPredicted RBP7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 NPFFR1Q9GZQ6 430 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 PSG8Q9UQ74 426 aa7.83□□□□□ -1.16
PTCHD4-202ENST00000398738 ZNF785A8K8V0 405 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 M0R296 226 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 ZNF833PQ6ZTB9 187 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 C8orf46Q8TAG6 207 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 RASL11BQ9BPW5 248 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms