RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 SACSQ9NZJ4 4579 aa12.07□□□□□ -0.48
APTR-201ENST00000398043 RYR2Q92736 4967 aa12.07□□□□□ -0.48
APTR-201ENST00000398043 ZNF705FA8MVS1 300 aaPredicted RBP12.06□□□□□ -0.48
APTR-201ENST00000398043 ZNF705DP0CH99 300 aaPredicted RBP12.06□□□□□ -0.48
APTR-201ENST00000398043 ZNF705BP0CI00 300 aaPredicted RBP12.06□□□□□ -0.48
APTR-201ENST00000398043 CXCL2P19875 107 aa12.06□□□□□ -0.48
APTR-201ENST00000398043 FXYD7P58549 80 aa12.06□□□□□ -0.48
APTR-201ENST00000398043 PSG9Q00887 426 aa12.06□□□□□ -0.48
APTR-201ENST00000398043 FGL1Q08830 312 aa12.06□□□□□ -0.48
APTR-201ENST00000398043 EBLN2Q6P2I7 272 aa12.06□□□□□ -0.48
APTR-201ENST00000398043 OR4B1Q8NGF8 309 aa12.06□□□□□ -0.48
APTR-201ENST00000398043 ZNF331Q9NQX6 463 aaPredicted RBP12.06□□□□□ -0.48
APTR-201ENST00000398043 PXMP4Q9Y6I8 212 aa12.06□□□□□ -0.48
APTR-201ENST00000398043 TRAV5A0A0B4J249 113 aa12.05□□□□□ -0.48
APTR-201ENST00000398043 H3BQ15 152 aa12.05□□□□□ -0.48
APTR-201ENST00000398043 PMS2P11Q13670 270 aa12.05□□□□□ -0.48
APTR-201ENST00000398043 PSG3Q16557 428 aa12.05□□□□□ -0.48
APTR-201ENST00000398043 CEMP1Q6PRD7 247 aaPredicted RBP12.05□□□□□ -0.48
APTR-201ENST00000398043 BPIFA4PQ86YQ2 179 aa12.05□□□□□ -0.48
APTR-201ENST00000398043 OR1L4Q8NGR5 311 aa12.05□□□□□ -0.48
APTR-201ENST00000398043 THAP6Q8TBB0 222 aa12.05□□□□□ -0.48
APTR-201ENST00000398043 SAT2Q96F10 170 aaPredicted RBP12.05□□□□□ -0.48
APTR-201ENST00000398043 PFDN5Q99471 154 aa12.05□□□□□ -0.48
APTR-201ENST00000398043 NEU1Q99519 415 aa12.05□□□□□ -0.48
APTR-201ENST00000398043 WDR61Q9GZS3 305 aaKnown RBP12.05□□□□□ -0.48
APTR-201ENST00000398043 HRH4Q9H3N8 390 aa12.05□□□□□ -0.48
APTR-201ENST00000398043 CXorf65A6NEN9 183 aa12.04□□□□□ -0.48
APTR-201ENST00000398043 NUPR2A6NF83 97 aa12.04□□□□□ -0.48
APTR-201ENST00000398043 SLC17A3O00476 420 aa12.04□□□□□ -0.48
APTR-201ENST00000398043 CNN1P51911 297 aaKnown RBP12.04□□□□□ -0.48
APTR-201ENST00000398043 NANOS2P60321 138 aaKnown RBP12.04□□□□□ -0.48
APTR-201ENST00000398043 CLINT1Q14677 625 aa12.04□□□□□ -0.48
APTR-201ENST00000398043 GCSAMLQ5JQS6 135 aa12.04□□□□□ -0.48
APTR-201ENST00000398043 LCN15Q6UWW0 184 aa12.04□□□□□ -0.48
APTR-201ENST00000398043 OR11H7Q8NGC8 314 aa12.04□□□□□ -0.48
APTR-201ENST00000398043 C11orf45Q8TAV5 145 aa12.04□□□□□ -0.48
APTR-201ENST00000398043 MBD2Q9UBB5 411 aa12.04□□□□□ -0.48
APTR-201ENST00000398043 HSPB11Q9Y547 144 aa12.04□□□□□ -0.48
APTR-201ENST00000398043 SNRPCP09234 159 aaKnown RBP12.03□□□□□ -0.48
APTR-201ENST00000398043 PET100P0DJ07 73 aa12.03□□□□□ -0.48
APTR-201ENST00000398043 C1orf158Q8N1D5 194 aa12.03□□□□□ -0.48
APTR-201ENST00000398043 ZNF738Q8NE65 137 aa12.03□□□□□ -0.48
APTR-201ENST00000398043 SLC50A1Q9BRV3 221 aa12.03□□□□□ -0.48
APTR-201ENST00000398043 CRXO43186 299 aaPredicted RBP12.02□□□□□ -0.49
APTR-201ENST00000398043 DUSP14O95147 198 aaKnown RBP12.02□□□□□ -0.49
APTR-201ENST00000398043 RPL12P30050 165 aaKnown RBP12.02□□□□□ -0.49
APTR-201ENST00000398043 FCN2Q15485 313 aa12.02□□□□□ -0.49
APTR-201ENST00000398043 OR8A1Q8NGG7 326 aa12.02□□□□□ -0.49
APTR-201ENST00000398043 PHLDA1Q8WV24 401 aaPredicted RBP12.02□□□□□ -0.49
APTR-201ENST00000398043 ATP5SQ99766 215 aa12.02□□□□□ -0.49
APTR-201ENST00000398043 ZNF586Q9NXT0 402 aa12.02□□□□□ -0.49
APTR-201ENST00000398043 TMEM14CQ9P0S9 112 aa12.02□□□□□ -0.49
APTR-201ENST00000398043 PLECQ15149 4684 aaKnown RBP12.01□□□□□ -0.49
APTR-201ENST00000398043 H3BTX0 84 aa12.01□□□□□ -0.49
APTR-201ENST00000398043 FAM167A-AS1Q96KT0 104 aa12.01□□□□□ -0.49
APTR-201ENST00000398043 MFFQ9GZY8 342 aa12.01□□□□□ -0.49
APTR-201ENST00000398043 SMIM9A6NGZ8 99 aa12□□□□□ -0.49
APTR-201ENST00000398043 ZNF253O75346 499 aa12□□□□□ -0.49
APTR-201ENST00000398043 GUK1Q16774 197 aa12□□□□□ -0.49
APTR-201ENST00000398043 LRRC20Q8TCA0 184 aa12□□□□□ -0.49
APTR-201ENST00000398043 RPUSD4Q96CM3 377 aaKnown RBP12□□□□□ -0.49
APTR-201ENST00000398043 IGF2BP2-AS1Q96M15 143 aa12□□□□□ -0.49
APTR-201ENST00000398043 SLC25A2Q9BXI2 301 aa12□□□□□ -0.49
APTR-201ENST00000398043 WFDC1Q9HC57 220 aa12□□□□□ -0.49
APTR-201ENST00000398043 CELA1Q9UNI1 258 aa12□□□□□ -0.49
APTR-201ENST00000398043 M0R2Z0 102 aa11.99□□□□□ -0.49
APTR-201ENST00000398043 NDUFB4O95168 129 aa11.99□□□□□ -0.49
APTR-201ENST00000398043 PRB4P10163 310 aaPredicted RBP11.99□□□□□ -0.49
APTR-201ENST00000398043 SPINK13Q1W4C9 94 aa11.99□□□□□ -0.49
APTR-201ENST00000398043 PARD6GQ9BYG4 376 aaPredicted RBP11.99□□□□□ -0.49
APTR-201ENST00000398043 MED28Q9H204 178 aa11.99□□□□□ -0.49
APTR-201ENST00000398043 DNAH1Q9P2D7 4330 aa11.98□□□□□ -0.49
APTR-201ENST00000398043 TRBV19A0A075B6N1 114 aa11.98□□□□□ -0.49
APTR-201ENST00000398043 PRAC2D3DTV9 90 aa11.98□□□□□ -0.49
APTR-201ENST00000398043 AMBPP02760 352 aa11.98□□□□□ -0.49
APTR-201ENST00000398043 HIST1H1AQ02539 215 aaPredicted RBP11.98□□□□□ -0.49
APTR-201ENST00000398043 Q5BKY6 102 aa11.98□□□□□ -0.49
APTR-201ENST00000398043 SMIM3Q9BZL3 60 aa11.98□□□□□ -0.49
APTR-201ENST00000398043 HYDINQ4G0P3 5121 aa11.98□□□□□ -0.49
APTR-201ENST00000398043 ALMS1Q8TCU4 4167 aa11.97□□□□□ -0.49
APTR-201ENST00000398043 BOLA2-SMG1P6H3BVE0 249 aa11.97□□□□□ -0.49
APTR-201ENST00000398043 JTBO76095 146 aa11.97□□□□□ -0.49
APTR-201ENST00000398043 PYYP10082 97 aa11.97□□□□□ -0.49
APTR-201ENST00000398043 HIST1H1EP10412 219 aaKnown RBP11.97□□□□□ -0.49
APTR-201ENST00000398043 OXA1LQ15070 435 aa11.97□□□□□ -0.49
APTR-201ENST00000398043 MIR17HGQ75NE6 70 aa11.97□□□□□ -0.49
APTR-201ENST00000398043 KCNIP2Q9NS61 270 aa11.97□□□□□ -0.49
APTR-201ENST00000398043 KLK5Q9Y337 293 aaPredicted RBP11.97□□□□□ -0.49
APTR-201ENST00000398043 GOLT1BQ9Y3E0 138 aa11.97□□□□□ -0.49
APTR-201ENST00000398043 RFNGQ9Y644 331 aa11.97□□□□□ -0.49
APTR-201ENST00000398043 IGHV3OR16-12A0A075B7B8 117 aa11.96□□□□□ -0.49
APTR-201ENST00000398043 C17orf112F2Z3M2 114 aa11.96□□□□□ -0.49
APTR-201ENST00000398043 GIPP09681 153 aaPredicted RBP11.96□□□□□ -0.49
APTR-201ENST00000398043 PDE6HQ13956 83 aa11.96□□□□□ -0.49
APTR-201ENST00000398043 RGS21Q2M5E4 152 aa11.96□□□□□ -0.49
APTR-201ENST00000398043 C12orf74Q32Q52 190 aa11.96□□□□□ -0.49
APTR-201ENST00000398043 BAP18Q8IXM2 172 aa11.96□□□□□ -0.49
APTR-201ENST00000398043 LINC00476Q8WZB0 136 aa11.96□□□□□ -0.49
APTR-201ENST00000398043 MRPL32Q9BYC8 188 aaKnown RBP11.96□□□□□ -0.49
APTR-201ENST00000398043 TMEM189A5PLL7 270 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms