RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 PET117Q6UWS5 81 aa10.97□□□□□ -0.65
NUP98-204ENST00000397004 TMEM14CQ9P0S9 112 aa10.97□□□□□ -0.65
NUP98-204ENST00000397004 MC5RP33032 325 aa10.96□□□□□ -0.65
NUP98-204ENST00000397004 ETFRF1Q6IPR1 90 aa10.96□□□□□ -0.65
NUP98-204ENST00000397004 ASCL5Q7RTU5 278 aa10.96□□□□□ -0.65
NUP98-204ENST00000397004 MAP1LC3CQ9BXW4 147 aa10.96□□□□□ -0.65
NUP98-204ENST00000397004 A0A1B0GUT8 65 aa10.96□□□□□ -0.65
NUP98-204ENST00000397004 HTR1DP28221 377 aa10.96□□□□□ -0.65
NUP98-204ENST00000397004 RNF151Q2KHN1 245 aa10.96□□□□□ -0.65
NUP98-204ENST00000397004 RNASE6Q93091 150 aaKnown RBP10.96□□□□□ -0.65
NUP98-204ENST00000397004 CST9LQ9H4G1 147 aa10.96□□□□□ -0.65
NUP98-204ENST00000397004 PAX2Q02962 417 aa10.96□□□□□ -0.66
NUP98-204ENST00000397004 GATD1Q8NB37 220 aa10.96□□□□□ -0.66
NUP98-204ENST00000397004 TMEM191AQ9H0A3 160 aa10.96□□□□□ -0.66
NUP98-204ENST00000397004 SPTBN2O15020 2390 aa10.96□□□□□ -0.66
NUP98-204ENST00000397004 GAS8-AS1O95177 125 aa10.95□□□□□ -0.66
NUP98-204ENST00000397004 RBP4P02753 201 aa10.95□□□□□ -0.66
NUP98-204ENST00000397004 ARF6P62330 175 aa10.95□□□□□ -0.66
NUP98-204ENST00000397004 FAM57AQ8TBR7 257 aa10.95□□□□□ -0.66
NUP98-204ENST00000397004 HLA-DRB1P01911 266 aa10.95□□□□□ -0.66
NUP98-204ENST00000397004 COX8AP10176 69 aa10.95□□□□□ -0.66
NUP98-204ENST00000397004 ZNF491Q8N8L2 437 aa10.95□□□□□ -0.66
NUP98-204ENST00000397004 TPPP3Q9BW30 176 aa10.95□□□□□ -0.66
NUP98-204ENST00000397004 NGBQ9NPG2 151 aa10.95□□□□□ -0.66
NUP98-204ENST00000397004 KAAG1Q9UBP8 84 aa10.95□□□□□ -0.66
NUP98-204ENST00000397004 SH3BGRL2Q9UJC5 107 aa10.95□□□□□ -0.66
NUP98-204ENST00000397004 SHISA9B4DS77 424 aa10.94□□□□□ -0.66
NUP98-204ENST00000397004 E7EQL1 145 aa10.94□□□□□ -0.66
NUP98-204ENST00000397004 BUB1B-PAK6H3BSN5 160 aa10.94□□□□□ -0.66
NUP98-204ENST00000397004 OR5AL1P0C617 328 aa10.94□□□□□ -0.66
NUP98-204ENST00000397004 RBPJQ06330 500 aa10.94□□□□□ -0.66
NUP98-204ENST00000397004 JMJD8Q96S16 334 aa10.94□□□□□ -0.66
NUP98-204ENST00000397004 LOC389332A0A1B0GUA5 103 aa10.94□□□□□ -0.66
NUP98-204ENST00000397004 C16orf97H3BN30 126 aa10.94□□□□□ -0.66
NUP98-204ENST00000397004 AP5S1Q9NUS5 200 aa10.94□□□□□ -0.66
NUP98-204ENST00000397004 PSG8Q9UQ74 426 aa10.94□□□□□ -0.66
NUP98-204ENST00000397004 AMN1Q8IY45 258 aa10.94□□□□□ -0.66
NUP98-204ENST00000397004 ZNF414Q96IQ9 312 aa10.94□□□□□ -0.66
NUP98-204ENST00000397004 SHANK2-AS3Q9BTD1 123 aa10.94□□□□□ -0.66
NUP98-204ENST00000397004 SIGLEC8Q9NYZ4 499 aa10.94□□□□□ -0.66
NUP98-204ENST00000397004 TMSB15BA0A087X1C1 80 aa10.93□□□□□ -0.66
NUP98-204ENST00000397004 GPR183P32249 361 aa10.93□□□□□ -0.66
NUP98-204ENST00000397004 NAA38Q9BRA0 125 aaKnown RBP10.93□□□□□ -0.66
NUP98-204ENST00000397004 D6R8Y8 96 aa10.93□□□□□ -0.66
NUP98-204ENST00000397004 F8W735 103 aaPredicted RBP10.93□□□□□ -0.66
NUP98-204ENST00000397004 H3BRN7 92 aa10.93□□□□□ -0.66
NUP98-204ENST00000397004 PSG3Q16557 428 aa10.93□□□□□ -0.66
NUP98-204ENST00000397004 OCIAD2Q56VL3 154 aa10.93□□□□□ -0.66
NUP98-204ENST00000397004 INSIG2Q9Y5U4 225 aa10.93□□□□□ -0.66
NUP98-204ENST00000397004 RIF1Q5UIP0 2472 aaKnown RBP10.93□□□□□ -0.66
NUP98-204ENST00000397004 TMEM75Q8N9X5 138 aa10.93□□□□□ -0.66
NUP98-204ENST00000397004 SMKR1H3BMG3 65 aa10.92□□□□□ -0.66
NUP98-204ENST00000397004 COX7A1P24310 79 aa10.92□□□□□ -0.66
NUP98-204ENST00000397004 ZFHX2Q9C0A1 2572 aaPredicted RBP10.92□□□□□ -0.66
NUP98-204ENST00000397004 TRBV6-1A0A0K0K1D8 114 aa10.92□□□□□ -0.66
NUP98-204ENST00000397004 LY6LH3BQJ8 138 aa10.92□□□□□ -0.66
NUP98-204ENST00000397004 HIST1H1AQ02539 215 aaPredicted RBP10.92□□□□□ -0.66
NUP98-204ENST00000397004 RASL11BQ9BPW5 248 aa10.92□□□□□ -0.66
NUP98-204ENST00000397004 CD5LO43866 347 aa10.92□□□□□ -0.66
NUP98-204ENST00000397004 FAM162BQ5T6X4 162 aa10.92□□□□□ -0.66
NUP98-204ENST00000397004 LYZL1Q6UWQ5 148 aa10.92□□□□□ -0.66
NUP98-204ENST00000397004 MS4A6AQ9H2W1 248 aa10.92□□□□□ -0.66
NUP98-204ENST00000397004 ABCA4P78363 2273 aa10.92□□□□□ -0.66
NUP98-204ENST00000397004 APOBEC3AP31941 199 aaPredicted RBP10.91□□□□□ -0.66
NUP98-204ENST00000397004 ZNF80P51504 273 aaPredicted RBP10.91□□□□□ -0.66
NUP98-204ENST00000397004 PRSS57Q6UWY2 283 aa10.91□□□□□ -0.66
NUP98-204ENST00000397004 RABAC1Q9UI14 185 aa10.91□□□□□ -0.66
NUP98-204ENST00000397004 HSPB8Q9UJY1 196 aa10.91□□□□□ -0.66
NUP98-204ENST00000397004 IGHG4P01861 327 aa10.91□□□□□ -0.66
NUP98-204ENST00000397004 PPBPP02775 128 aa10.91□□□□□ -0.66
NUP98-204ENST00000397004 IGFL4Q6B9Z1 124 aa10.91□□□□□ -0.66
NUP98-204ENST00000397004 ZNF493Q6ZR52 646 aa10.91□□□□□ -0.66
NUP98-204ENST00000397004 U3KQK5 164 aa10.91□□□□□ -0.66
NUP98-204ENST00000397004 SAP30O75446 220 aa10.91□□□□□ -0.66
NUP98-204ENST00000397004 C12orf54Q6X4T0 127 aa10.91□□□□□ -0.66
NUP98-204ENST00000397004 JKAMPQ9P055 326 aa10.91□□□□□ -0.66
NUP98-204ENST00000397004 UQCRFS1P47985 274 aa10.9□□□□□ -0.66
NUP98-204ENST00000397004 OR8A1Q8NGG7 326 aa10.9□□□□□ -0.66
NUP98-204ENST00000397004 GAGE12BA1L429 117 aa10.9□□□□□ -0.66
NUP98-204ENST00000397004 IL4P05112 153 aa10.9□□□□□ -0.66
NUP98-204ENST00000397004 SAPCD1Q5SSQ6 148 aa10.9□□□□□ -0.66
NUP98-204ENST00000397004 WFDC3Q8IUB2 231 aa10.9□□□□□ -0.66
NUP98-204ENST00000397004 C7orf71A4D174 169 aa10.9□□□□□ -0.66
NUP98-204ENST00000397004 FCGR2BP31994 310 aaPredicted RBP10.9□□□□□ -0.66
NUP98-204ENST00000397004 MSRB1Q9NZV6 116 aa10.9□□□□□ -0.66
NUP98-204ENST00000397004 TLN1Q9Y490 2541 aaKnown RBP10.9□□□□□ -0.67
NUP98-204ENST00000397004 UFSP1Q6NVU6 142 aa10.9□□□□□ -0.67
NUP98-204ENST00000397004 PRSS3P2Q8NHM4 247 aa10.9□□□□□ -0.67
NUP98-204ENST00000397004 IGKV2-40A0A087WW87 121 aaPredicted RBP10.89□□□□□ -0.67
NUP98-204ENST00000397004 IGKV2D-40P01614 121 aaPredicted RBP10.89□□□□□ -0.67
NUP98-204ENST00000397004 HLA-DMBP28068 263 aa10.89□□□□□ -0.67
NUP98-204ENST00000397004 PCP2Q8IVA1 136 aa10.89□□□□□ -0.67
NUP98-204ENST00000397004 MUC6Q6W4X9 2439 aa10.89□□□□□ -0.67
NUP98-204ENST00000397004 WI2-2373I1.2A0A1W2PRP0 233 aa10.89□□□□□ -0.67
NUP98-204ENST00000397004 HSBP1L1C9JCN9 74 aa10.89□□□□□ -0.67
NUP98-204ENST00000397004 LY6HO94772 140 aa10.89□□□□□ -0.67
NUP98-204ENST00000397004 MRPL51Q4U2R6 128 aaKnown RBP10.89□□□□□ -0.67
NUP98-204ENST00000397004 PRR30Q53SZ7 412 aaPredicted RBP10.89□□□□□ -0.67
NUP98-204ENST00000397004 RNF125Q96EQ8 232 aa10.89□□□□□ -0.67
NUP98-204ENST00000397004 TIMM23O14925 209 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms