RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ZNF479Q96JC4 524 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 TMEM242Q9NWH2 141 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 TRAV8-1A0A0A6YYK1 113 aa8.4□□□□□ -1.06
COL4A6-203ENST00000394872 LURAP1LQ8IV03 231 aa8.4□□□□□ -1.06
COL4A6-203ENST00000394872 MS4A6AQ9H2W1 248 aa8.4□□□□□ -1.06
COL4A6-203ENST00000394872 C1orf122Q6ZSJ8 110 aa8.4□□□□□ -1.06
COL4A6-203ENST00000394872 C15orf62A8K5M9 175 aa8.4□□□□□ -1.06
COL4A6-203ENST00000394872 DKK1O94907 266 aa8.4□□□□□ -1.06
COL4A6-203ENST00000394872 CEACAM8P31997 349 aaPredicted RBP8.4□□□□□ -1.06
COL4A6-203ENST00000394872 ALPK2Q86TB3 2170 aa8.4□□□□□ -1.06
COL4A6-203ENST00000394872 TRAV1-1A0A0B4J248 108 aa8.4□□□□□ -1.06
COL4A6-203ENST00000394872 E9PQ18 207 aa8.4□□□□□ -1.06
COL4A6-203ENST00000394872 CYTL1Q9NRR1 136 aa8.4□□□□□ -1.06
COL4A6-203ENST00000394872 CXCL1P09341 107 aa8.4□□□□□ -1.07
COL4A6-203ENST00000394872 SAMD5Q5TGI4 173 aa8.4□□□□□ -1.07
COL4A6-203ENST00000394872 ZNF562Q6V9R5 426 aa8.4□□□□□ -1.07
COL4A6-203ENST00000394872 LINC01551Q86U37 167 aa8.4□□□□□ -1.07
COL4A6-203ENST00000394872 RPP25LQ8N5L8 163 aaKnown RBP8.4□□□□□ -1.07
COL4A6-203ENST00000394872 ZSWIM8A7E2V4 1837 aa8.4□□□□□ -1.07
COL4A6-203ENST00000394872 A0A1W2PPI3 338 aa8.39□□□□□ -1.07
COL4A6-203ENST00000394872 IGFL3Q6UXB1 125 aa8.39□□□□□ -1.07
COL4A6-203ENST00000394872 SHANK2-AS3Q9BTD1 123 aa8.39□□□□□ -1.07
COL4A6-203ENST00000394872 TCF20Q9UGU0 1960 aaKnown RBP8.39□□□□□ -1.07
COL4A6-203ENST00000394872 INTS1Q8N201 2190 aaKnown RBP8.39□□□□□ -1.07
COL4A6-203ENST00000394872 CACNA1EQ15878 2313 aa8.39□□□□□ -1.07
COL4A6-203ENST00000394872 SMKR1H3BMG3 65 aa8.39□□□□□ -1.07
COL4A6-203ENST00000394872 LEPROTO15243 131 aa8.39□□□□□ -1.07
COL4A6-203ENST00000394872 QRFPP83859 136 aa8.39□□□□□ -1.07
COL4A6-203ENST00000394872 AMBPP02760 352 aa8.39□□□□□ -1.07
COL4A6-203ENST00000394872 TMEM158Q8WZ71 300 aa8.39□□□□□ -1.07
COL4A6-203ENST00000394872 UBE2CO00762 179 aa8.39□□□□□ -1.07
COL4A6-203ENST00000394872 CFHR2P36980 270 aa8.39□□□□□ -1.07
COL4A6-203ENST00000394872 SSBP2P81877 361 aaPredicted RBP8.39□□□□□ -1.07
COL4A6-203ENST00000394872 A0A1B0GW64 132 aa8.38□□□□□ -1.07
COL4A6-203ENST00000394872 J3QLI3 93 aa8.38□□□□□ -1.07
COL4A6-203ENST00000394872 SPINK13Q1W4C9 94 aa8.38□□□□□ -1.07
COL4A6-203ENST00000394872 FER1L5A0AVI2 2057 aa8.38□□□□□ -1.07
COL4A6-203ENST00000394872 KNCNA6PVL3 124 aa8.38□□□□□ -1.07
COL4A6-203ENST00000394872 APOC4P55056 127 aa8.38□□□□□ -1.07
COL4A6-203ENST00000394872 FAM90A2PQ658T7 463 aa8.38□□□□□ -1.07
COL4A6-203ENST00000394872 Q8TCH9 128 aa8.38□□□□□ -1.07
COL4A6-203ENST00000394872 CITED2Q99967 270 aaPredicted RBP8.38□□□□□ -1.07
COL4A6-203ENST00000394872 VWA8A3KMH1 1905 aa8.38□□□□□ -1.07
COL4A6-203ENST00000394872 G3V318 75 aa8.38□□□□□ -1.07
COL4A6-203ENST00000394872 NDUFB8O95169 186 aa8.38□□□□□ -1.07
COL4A6-203ENST00000394872 LGALS1P09382 135 aaKnown RBP8.38□□□□□ -1.07
COL4A6-203ENST00000394872 TRPT1Q86TN4 253 aaKnown RBP8.38□□□□□ -1.07
COL4A6-203ENST00000394872 HIST1H2BLQ99880 126 aa8.38□□□□□ -1.07
COL4A6-203ENST00000394872 LIME1Q9H400 295 aa8.38□□□□□ -1.07
COL4A6-203ENST00000394872 KLK9Q9UKQ9 250 aa8.38□□□□□ -1.07
COL4A6-203ENST00000394872 IGHV3-16A0A0C4DH30 117 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 MYMXA0A1B0GTQ4 84 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 GAGE12JA6NER3 117 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 GAGE1Q13065 139 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 GAGE4Q13068 117 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 GAGE5Q13069 117 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 GAGE13Q4V321 117 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 Q6ZS49 121 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 MGAMO43451 1857 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 TRBV24-1A0A075B6N3 115 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 LY6G6EA0A0G2JKS1 128 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 SRSF4Q08170 494 aaKnown RBP8.37□□□□□ -1.07
COL4A6-203ENST00000394872 Q86TA4 180 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 MCRIP2Q9BUT9 160 aaKnown RBP8.37□□□□□ -1.07
COL4A6-203ENST00000394872 U3KQA8 63 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 A0A0G2JRQ6 117 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 FNDC10F2Z333 226 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 ITGB1BP1O14713 200 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 PLA2G2CQ5R387 149 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 TIMM21Q9BVV7 248 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 LY96Q9Y6Y9 160 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 TP53BP1Q12888 1972 aaPredicted RBP8.37□□□□□ -1.07
COL4A6-203ENST00000394872 ZNF561-AS1K7EIQ3 104 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 ARMS2P0C7Q2 107 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 MST1LQ2TV78 715 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 SPXQ9BT56 116 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 PLXNA3P51805 1871 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 HEATR1Q9H583 2144 aaKnown RBP8.37□□□□□ -1.07
COL4A6-203ENST00000394872 AZU1P20160 251 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 AMN1Q8IY45 258 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 CITED1Q99966 193 aa8.37□□□□□ -1.07
COL4A6-203ENST00000394872 GUSBP1Q15486 140 aa8.36□□□□□ -1.07
COL4A6-203ENST00000394872 HS3ST6Q96QI5 342 aa8.36□□□□□ -1.07
COL4A6-203ENST00000394872 HIST1H4AP62805 103 aaKnown RBP8.36□□□□□ -1.07
COL4A6-203ENST00000394872 PDE6HQ13956 83 aa8.36□□□□□ -1.07
COL4A6-203ENST00000394872 ZFAND6Q6FIF0 208 aa8.36□□□□□ -1.07
COL4A6-203ENST00000394872 PRIMA1Q86XR5 153 aa8.36□□□□□ -1.07
COL4A6-203ENST00000394872 BCL6BQ8N143 479 aaPredicted RBP8.36□□□□□ -1.07
COL4A6-203ENST00000394872 YLPM1P49750 1951 aaKnown RBP8.36□□□□□ -1.07
COL4A6-203ENST00000394872 hDV102S1A0JD36 115 aa8.36□□□□□ -1.07
COL4A6-203ENST00000394872 DLEU1O43261 78 aa8.36□□□□□ -1.07
COL4A6-203ENST00000394872 TCTEX1D4Q5JR98 221 aa8.36□□□□□ -1.07
COL4A6-203ENST00000394872 NDUFS6O75380 124 aaKnown RBP8.36□□□□□ -1.07
COL4A6-203ENST00000394872 CGB3P0DN86 165 aa8.36□□□□□ -1.07
COL4A6-203ENST00000394872 ZNF833PQ6ZTB9 187 aa8.36□□□□□ -1.07
COL4A6-203ENST00000394872 HIST3H2BBQ8N257 126 aa8.36□□□□□ -1.07
COL4A6-203ENST00000394872 SIP14410 1827 aa8.35□□□□□ -1.07
COL4A6-203ENST00000394872 LY6G5BQ8NDX9 201 aa8.35□□□□□ -1.07
COL4A6-203ENST00000394872 C8orf49Q96NF6 230 aa8.35□□□□□ -1.07
COL4A6-203ENST00000394872 TRBV25-1A0A075B6N4 114 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms