RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 FAM120AOSQ5T036 256 aa11.09□□□□□ -0.63
PPP3CA-202ENST00000394853 LINC00305Q7Z4B0 112 aa11.09□□□□□ -0.63
PPP3CA-202ENST00000394853 BLNKQ8WV28 456 aa11.09□□□□□ -0.63
PPP3CA-202ENST00000394853 F11RQ9Y624 299 aaKnown RBP11.09□□□□□ -0.63
PPP3CA-202ENST00000394853 INS-IGF2F8WCM5 200 aa11.08□□□□□ -0.64
PPP3CA-202ENST00000394853 CORTO00230 105 aa11.08□□□□□ -0.64
PPP3CA-202ENST00000394853 FOLR2P14207 255 aa11.08□□□□□ -0.64
PPP3CA-202ENST00000394853 GALR1P47211 349 aa11.08□□□□□ -0.64
PPP3CA-202ENST00000394853 TAS2R45P59539 299 aa11.08□□□□□ -0.64
PPP3CA-202ENST00000394853 ASPHD1Q5U4P2 390 aa11.08□□□□□ -0.64
PPP3CA-202ENST00000394853 LINC01551Q86U37 167 aa11.08□□□□□ -0.64
PPP3CA-202ENST00000394853 OR1P1Q8NH06 330 aa11.08□□□□□ -0.64
PPP3CA-202ENST00000394853 TBX15Q96SF7 602 aa11.08□□□□□ -0.64
PPP3CA-202ENST00000394853 KIR3DL3Q8N743 410 aa11.08□□□□□ -0.64
PPP3CA-202ENST00000394853 SIGMAR1Q99720 223 aa11.08□□□□□ -0.64
PPP3CA-202ENST00000394853 OCC1Q8TAD7 63 aa11.08□□□□□ -0.64
PPP3CA-202ENST00000394853 MDFIC2A0A1B0GVS7 189 aa11.07□□□□□ -0.64
PPP3CA-202ENST00000394853 IGHV3-23P01764 117 aa11.07□□□□□ -0.64
PPP3CA-202ENST00000394853 SLC25A2Q9BXI2 301 aa11.07□□□□□ -0.64
PPP3CA-202ENST00000394853 LYZP61626 148 aa11.07□□□□□ -0.64
PPP3CA-202ENST00000394853 DEFB112Q30KQ8 113 aa11.07□□□□□ -0.64
PPP3CA-202ENST00000394853 PQLC2Q6ZP29 291 aa11.07□□□□□ -0.64
PPP3CA-202ENST00000394853 SGK494Q96LW2 274 aa11.07□□□□□ -0.64
PPP3CA-202ENST00000394853 SIRPDQ9H106 197 aa11.07□□□□□ -0.64
PPP3CA-202ENST00000394853 LOXL1Q08397 574 aaPredicted RBP11.07□□□□□ -0.64
PPP3CA-202ENST00000394853 LRRC75A-AS1Q8N1F1 130 aa11.07□□□□□ -0.64
PPP3CA-202ENST00000394853 LINC00479Q96M42 142 aa11.07□□□□□ -0.64
PPP3CA-202ENST00000394853 TMEM167BQ9NRX6 74 aa11.07□□□□□ -0.64
PPP3CA-202ENST00000394853 ZANQ9Y493 2812 aa11.06□□□□□ -0.64
PPP3CA-202ENST00000394853 GGTLC3B5MD39 225 aa11.06□□□□□ -0.64
PPP3CA-202ENST00000394853 CX3CL1P78423 397 aa11.06□□□□□ -0.64
PPP3CA-202ENST00000394853 NDPQ00604 133 aa11.06□□□□□ -0.64
PPP3CA-202ENST00000394853 OOSP1A8MZH6 123 aa11.06□□□□□ -0.64
PPP3CA-202ENST00000394853 PF4P02776 101 aa11.06□□□□□ -0.64
PPP3CA-202ENST00000394853 RANP62826 216 aaKnown RBP11.06□□□□□ -0.64
PPP3CA-202ENST00000394853 TIGITQ495A1 244 aa11.06□□□□□ -0.64
PPP3CA-202ENST00000394853 ARPC1AQ92747 370 aa11.06□□□□□ -0.64
PPP3CA-202ENST00000394853 FAM167A-AS1Q96KT0 104 aa11.06□□□□□ -0.64
PPP3CA-202ENST00000394853 PAXXQ9BUH6 204 aa11.06□□□□□ -0.64
PPP3CA-202ENST00000394853 NPFFR1Q9GZQ6 430 aa11.06□□□□□ -0.64
PPP3CA-202ENST00000394853 PSMB11A5LHX3 300 aa11.05□□□□□ -0.64
PPP3CA-202ENST00000394853 OR2J3O76001 311 aa11.05□□□□□ -0.64
PPP3CA-202ENST00000394853 ZNF329Q86UD4 541 aa11.05□□□□□ -0.64
PPP3CA-202ENST00000394853 GCN1Q92616 2671 aaKnown RBP11.05□□□□□ -0.64
PPP3CA-202ENST00000394853 CIARTQ8N365 385 aaPredicted RBP11.05□□□□□ -0.64
PPP3CA-202ENST00000394853 ITPR2Q14571 2701 aa11.05□□□□□ -0.64
PPP3CA-202ENST00000394853 J3QLI3 93 aa11.05□□□□□ -0.64
PPP3CA-202ENST00000394853 PAX2Q02962 417 aa11.05□□□□□ -0.64
PPP3CA-202ENST00000394853 NIT1Q86X76 327 aa11.05□□□□□ -0.64
PPP3CA-202ENST00000394853 OR1L4Q8NGR5 311 aa11.05□□□□□ -0.64
PPP3CA-202ENST00000394853 OR5R1Q8NH85 324 aa11.05□□□□□ -0.64
PPP3CA-202ENST00000394853 CTDSP1Q9GZU7 261 aa11.05□□□□□ -0.64
PPP3CA-202ENST00000394853 IFITM10A6NMD0 228 aa11.04□□□□□ -0.64
PPP3CA-202ENST00000394853 BCL6BQ8N143 479 aaPredicted RBP11.04□□□□□ -0.64
PPP3CA-202ENST00000394853 THAP8Q8NA92 274 aa11.04□□□□□ -0.64
PPP3CA-202ENST00000394853 RNF5Q99942 180 aa11.04□□□□□ -0.64
PPP3CA-202ENST00000394853 PEF1Q9UBV8 284 aaKnown RBP11.04□□□□□ -0.64
PPP3CA-202ENST00000394853 SOX21Q9Y651 276 aaPredicted RBP11.04□□□□□ -0.64
PPP3CA-202ENST00000394853 IGKV3-7A0A075B6H7 116 aa11.04□□□□□ -0.64
PPP3CA-202ENST00000394853 SLC17A3O00476 420 aa11.04□□□□□ -0.64
PPP3CA-202ENST00000394853 IGHV3-11P01762 117 aa11.04□□□□□ -0.64
PPP3CA-202ENST00000394853 IGHV4-59P01825 116 aa11.04□□□□□ -0.64
PPP3CA-202ENST00000394853 TYMSP04818 313 aa11.04□□□□□ -0.64
PPP3CA-202ENST00000394853 SLC35B1P78383 322 aa11.04□□□□□ -0.64
PPP3CA-202ENST00000394853 F8WDY8 70 aa11.04□□□□□ -0.64
PPP3CA-202ENST00000394853 PIP4P2Q8N4L2 257 aa11.04□□□□□ -0.64
PPP3CA-202ENST00000394853 TMEM242Q9NWH2 141 aa11.04□□□□□ -0.64
PPP3CA-202ENST00000394853 ZNF586Q9NXT0 402 aa11.04□□□□□ -0.64
PPP3CA-202ENST00000394853 IGHV4-31P0DP07 118 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 RPL24P83731 157 aaKnown RBP11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 SMR3AQ99954 134 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 PRSS22Q9GZN4 317 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 HYPMO75409 117 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 PFN1P07737 140 aaKnown RBP11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 MGST1P10620 155 aaKnown RBP11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 NTF3P20783 257 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 C1QL4Q86Z23 238 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 FRZBQ92765 325 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 C19orf24Q9BVV8 132 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 IGHV3OR16-8A0A075B7F1 116 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 I3L2K1 104 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 K7EN84 100 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 AMBPP02760 352 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 TRGV3P03979 118 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 TPPP2P59282 170 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 GNG5P63218 68 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 CENPWQ5EE01 88 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 MRPL32Q9BYC8 188 aaKnown RBP11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 MOB4Q9Y3A3 225 aa11.03□□□□□ -0.64
PPP3CA-202ENST00000394853 HOXA3O43365 443 aaPredicted RBP11.02□□□□□ -0.64
PPP3CA-202ENST00000394853 PAX8Q06710 450 aa11.02□□□□□ -0.64
PPP3CA-202ENST00000394853 NPBQ8NG41 125 aa11.02□□□□□ -0.64
PPP3CA-202ENST00000394853 ORAOV1Q8WV07 137 aa11.02□□□□□ -0.64
PPP3CA-202ENST00000394853 SMPXQ9UHP9 88 aa11.02□□□□□ -0.64
PPP3CA-202ENST00000394853 FBN2P35556 2912 aa11.02□□□□□ -0.65
PPP3CA-202ENST00000394853 K7EIM0 57 aa11.02□□□□□ -0.65
PPP3CA-202ENST00000394853 NDUFA3O95167 84 aa11.02□□□□□ -0.65
PPP3CA-202ENST00000394853 GZMBP10144 247 aa11.02□□□□□ -0.65
PPP3CA-202ENST00000394853 GNG4P50150 75 aa11.02□□□□□ -0.65
PPP3CA-202ENST00000394853 IQCJQ1A5X6 159 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms