RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 FCGR2BP31994 310 aaPredicted RBP10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 CRIP1P50238 77 aa10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 DTX2Q86UW9 622 aa10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 DAZAP1Q96EP5 407 aaKnown RBP10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 C8orf49Q96NF6 230 aa10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 RBM14Q96PK6 669 aaKnown RBP10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 MYO18BQ8IUG5 2567 aa10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 SPG11Q96JI7 2443 aa10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 USP9XQ93008 2570 aaPredicted RBP10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 TMSB15BA0A087X1C1 80 aa10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 IGHV1-24A0A0C4DH33 117 aa10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 NDUFB8O95169 186 aa10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 HINT1P49773 126 aaPredicted RBP10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 RASL11AQ6T310 242 aa10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 ZNF491Q8N8L2 437 aa10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 OTORQ9NRC9 128 aa10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 LOC105371242A0A075B767 164 aa10.59□□□□□ -0.71
GTF2F1-201ENST00000394456 APOHP02749 345 aaPredicted RBP10.59□□□□□ -0.71
GTF2F1-201ENST00000394456 CFHR4Q92496 578 aa10.59□□□□□ -0.71
GTF2F1-201ENST00000394456 CRYBG3Q68DQ2 2970 aa10.59□□□□□ -0.71
GTF2F1-201ENST00000394456 TRBV19A0A075B6N1 114 aa10.59□□□□□ -0.71
GTF2F1-201ENST00000394456 RBPMS2Q6ZRY4 209 aaKnown RBP10.59□□□□□ -0.71
GTF2F1-201ENST00000394456 hDV102S1A0JD36 115 aa10.58□□□□□ -0.72
GTF2F1-201ENST00000394456 DLEU1O43261 78 aa10.58□□□□□ -0.72
GTF2F1-201ENST00000394456 HNRNPA3P51991 378 aaKnown RBP10.58□□□□□ -0.72
GTF2F1-201ENST00000394456 SIGLEC15Q6ZMC9 328 aa10.58□□□□□ -0.72
GTF2F1-201ENST00000394456 SHANK2-AS3Q9BTD1 123 aa10.58□□□□□ -0.72
GTF2F1-201ENST00000394456 UQCR10Q9UDW1 63 aa10.58□□□□□ -0.72
GTF2F1-201ENST00000394456 BTF3P20290 206 aaKnown RBP10.58□□□□□ -0.72
GTF2F1-201ENST00000394456 ATP5L2Q7Z4Y8 100 aa10.58□□□□□ -0.72
GTF2F1-201ENST00000394456 ZNF492Q9P255 531 aa10.58□□□□□ -0.72
GTF2F1-201ENST00000394456 NPIPB6E9PJ23 425 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 F8W735 103 aaPredicted RBP10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 NBR2O15453 112 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 HLA-DRB1P01911 266 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 HTR1DP28221 377 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 RNF125Q96EQ8 232 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 FANCD2OSQ96PS1 177 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 LOC102724200A0A096LPH7 203 aaPredicted RBP10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 H3BRN7 92 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 M0QZK8 103 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 MRPS12O15235 138 aaKnown RBP10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 FAM106CPP0CH98 169 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 ZFP36P26651 326 aaKnown RBP10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 HLA-DMBP28068 263 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 FAM106AQ4KMX7 169 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 ERASQ7Z444 233 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 CHRDL1Q9BU40 450 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 LAMTOR2Q9Y2Q5 125 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 USP24Q9UPU5 2620 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 CHEK1O14757 476 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 HOXB4P17483 251 aaPredicted RBP10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 TSPOP30536 169 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 FOXE3Q13461 319 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 TMUB1Q9BVT8 246 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 DPM3Q9P2X0 92 aa10.57□□□□□ -0.72
GTF2F1-201ENST00000394456 NCBP2LA6PVI3 153 aaKnown RBP10.56□□□□□ -0.72
GTF2F1-201ENST00000394456 FXYD7P58549 80 aa10.56□□□□□ -0.72
GTF2F1-201ENST00000394456 UNQ5815/PRO19632Q6UWF5 114 aa10.56□□□□□ -0.72
GTF2F1-201ENST00000394456 ZNF414Q96IQ9 312 aa10.56□□□□□ -0.72
GTF2F1-201ENST00000394456 TMEM14CQ9P0S9 112 aa10.56□□□□□ -0.72
GTF2F1-201ENST00000394456 PSG8Q9UQ74 426 aa10.56□□□□□ -0.72
GTF2F1-201ENST00000394456 CENPEQ02224 2701 aa10.56□□□□□ -0.72
GTF2F1-201ENST00000394456 IGKV2-40A0A087WW87 121 aaPredicted RBP10.56□□□□□ -0.72
GTF2F1-201ENST00000394456 IGKV2D-40P01614 121 aaPredicted RBP10.56□□□□□ -0.72
GTF2F1-201ENST00000394456 TRAV9-2A0A087WT02 112 aa10.55□□□□□ -0.72
GTF2F1-201ENST00000394456 BPIFA4PQ86YQ2 179 aa10.55□□□□□ -0.72
GTF2F1-201ENST00000394456 OR11H6Q8NGC7 330 aa10.55□□□□□ -0.72
GTF2F1-201ENST00000394456 GOLT1BQ9Y3E0 138 aa10.55□□□□□ -0.72
GTF2F1-201ENST00000394456 EPG5Q9HCE0 2579 aa10.55□□□□□ -0.72
GTF2F1-201ENST00000394456 OR2T8A6NH00 312 aa10.55□□□□□ -0.72
GTF2F1-201ENST00000394456 PAX2Q02962 417 aa10.55□□□□□ -0.72
GTF2F1-201ENST00000394456 LOXL1Q08397 574 aaPredicted RBP10.55□□□□□ -0.72
GTF2F1-201ENST00000394456 CT83Q5H943 113 aa10.55□□□□□ -0.72
GTF2F1-201ENST00000394456 VMO1Q7Z5L0 202 aa10.55□□□□□ -0.72
GTF2F1-201ENST00000394456 OR4F17Q8NGA8 305 aa10.55□□□□□ -0.72
GTF2F1-201ENST00000394456 Q8TAT8 98 aa10.55□□□□□ -0.72
GTF2F1-201ENST00000394456 TMEM70Q9BUB7 260 aa10.55□□□□□ -0.72
GTF2F1-201ENST00000394456 C1RLQ9NZP8 487 aa10.55□□□□□ -0.72
GTF2F1-201ENST00000394456 TMEM213A2RRL7 107 aa10.54□□□□□ -0.72
GTF2F1-201ENST00000394456 OR4C46A6NHA9 309 aa10.54□□□□□ -0.72
GTF2F1-201ENST00000394456 GNG7O60262 68 aa10.54□□□□□ -0.72
GTF2F1-201ENST00000394456 LINC00614P0C842 121 aa10.54□□□□□ -0.72
GTF2F1-201ENST00000394456 PRTN3P24158 256 aa10.54□□□□□ -0.72
GTF2F1-201ENST00000394456 COL5A1-AS1Q5SY13 56 aa10.54□□□□□ -0.72
GTF2F1-201ENST00000394456 C16orf54Q6UWD8 224 aa10.54□□□□□ -0.72
GTF2F1-201ENST00000394456 SMIM12Q96EX1 92 aa10.54□□□□□ -0.72
GTF2F1-201ENST00000394456 DOPEY1Q5JWR5 2465 aa10.54□□□□□ -0.72
GTF2F1-201ENST00000394456 M0R1W7 72 aa10.54□□□□□ -0.72
GTF2F1-201ENST00000394456 C5orf64Q2M2E5 130 aa10.54□□□□□ -0.72
GTF2F1-201ENST00000394456 CELSR2Q9HCU4 2923 aa10.54□□□□□ -0.72
GTF2F1-201ENST00000394456 ABCA2Q9BZC7 2435 aa10.53□□□□□ -0.72
GTF2F1-201ENST00000394456 SYS1-DBNDD2H3BUS1 97 aa10.53□□□□□ -0.72
GTF2F1-201ENST00000394456 TCTAP57738 103 aa10.53□□□□□ -0.72
GTF2F1-201ENST00000394456 PSG3Q16557 428 aa10.53□□□□□ -0.72
GTF2F1-201ENST00000394456 CSMD2Q7Z408 3487 aa10.53□□□□□ -0.72
GTF2F1-201ENST00000394456 WI2-2373I1.2A0A1W2PRP0 233 aa10.53□□□□□ -0.72
GTF2F1-201ENST00000394456 ODF3BA8MYP8 253 aa10.53□□□□□ -0.72
GTF2F1-201ENST00000394456 LEPROTL1O95214 131 aa10.53□□□□□ -0.72
GTF2F1-201ENST00000394456 NCR2O95944 276 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms