RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 SLC25A5P05141 298 aaKnown RBP15.49■□□□□ 0.07
HDDC3-202ENST00000394272 RPL35P42766 123 aaKnown RBP15.49■□□□□ 0.07
HDDC3-202ENST00000394272 TM4SF20Q53R12 229 aa15.49■□□□□ 0.07
HDDC3-202ENST00000394272 C2CD3Q4AC94 2353 aa15.49■□□□□ 0.07
HDDC3-202ENST00000394272 ZNF253O75346 499 aa15.48■□□□□ 0.07
HDDC3-202ENST00000394272 ATF4P18848 351 aaPredicted RBP15.48■□□□□ 0.07
HDDC3-202ENST00000394272 GALR1P47211 349 aa15.48■□□□□ 0.07
HDDC3-202ENST00000394272 REC114Q7Z4M0 266 aa15.48■□□□□ 0.07
HDDC3-202ENST00000394272 IGHV7-4-1A0A0J9YVY3 117 aa15.48■□□□□ 0.07
HDDC3-202ENST00000394272 C7orf77A4D0Y5 90 aa15.48■□□□□ 0.07
HDDC3-202ENST00000394272 HOXD3P31249 432 aaPredicted RBP15.48■□□□□ 0.07
HDDC3-202ENST00000394272 GNG5P63218 68 aa15.48■□□□□ 0.07
HDDC3-202ENST00000394272 RHEBQ15382 184 aa15.48■□□□□ 0.07
HDDC3-202ENST00000394272 KHDC1LQ5JSQ8 128 aa15.48■□□□□ 0.07
HDDC3-202ENST00000394272 UFC1Q9Y3C8 167 aa15.48■□□□□ 0.07
HDDC3-202ENST00000394272 A0A1W2PS18 150 aa15.47■□□□□ 0.07
HDDC3-202ENST00000394272 LGALS9O00182 355 aa15.47■□□□□ 0.07
HDDC3-202ENST00000394272 CD28P10747 220 aa15.47■□□□□ 0.07
HDDC3-202ENST00000394272 PROK1P58294 105 aa15.47■□□□□ 0.07
HDDC3-202ENST00000394272 RPL23P62829 140 aaKnown RBP15.47■□□□□ 0.07
HDDC3-202ENST00000394272 DEFB136Q30KP8 78 aa15.47■□□□□ 0.07
HDDC3-202ENST00000394272 RNF114Q9Y508 228 aa15.47■□□□□ 0.07
HDDC3-202ENST00000394272 HELTA6NFD8 242 aa15.46■□□□□ 0.07
HDDC3-202ENST00000394272 A8MWP6 167 aa15.46■□□□□ 0.07
HDDC3-202ENST00000394272 C9JCJ5 164 aa15.46■□□□□ 0.07
HDDC3-202ENST00000394272 SRSF2Q01130 221 aaKnown RBP15.46■□□□□ 0.07
HDDC3-202ENST00000394272 HIST2H2BDQ6DRA6 164 aa15.46■□□□□ 0.07
HDDC3-202ENST00000394272 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.46■□□□□ 0.07
HDDC3-202ENST00000394272 KLHL30-AS1Q8NEE0 82 aa15.46■□□□□ 0.07
HDDC3-202ENST00000394272 ATG101Q9BSB4 218 aa15.46■□□□□ 0.07
HDDC3-202ENST00000394272 TMEM213A2RRL7 107 aa15.46■□□□□ 0.06
HDDC3-202ENST00000394272 ZNF785A8K8V0 405 aa15.46■□□□□ 0.06
HDDC3-202ENST00000394272 TCRAP04437 139 aa15.46■□□□□ 0.06
HDDC3-202ENST00000394272 AKR1C3P42330 323 aa15.46■□□□□ 0.06
HDDC3-202ENST00000394272 PSG9Q00887 426 aa15.46■□□□□ 0.06
HDDC3-202ENST00000394272 GRAMD2BQ96HH9 432 aa15.46■□□□□ 0.06
HDDC3-202ENST00000394272 LINC00479Q96M42 142 aa15.46■□□□□ 0.06
HDDC3-202ENST00000394272 SMPXQ9UHP9 88 aa15.46■□□□□ 0.06
HDDC3-202ENST00000394272 LINC01619G3V211 115 aa15.45■□□□□ 0.06
HDDC3-202ENST00000394272 HAX1O00165 279 aa15.45■□□□□ 0.06
HDDC3-202ENST00000394272 EDN2P20800 178 aa15.45■□□□□ 0.06
HDDC3-202ENST00000394272 SYNJ2BPP57105 145 aa15.45■□□□□ 0.06
HDDC3-202ENST00000394272 LINC01551Q86U37 167 aa15.45■□□□□ 0.06
HDDC3-202ENST00000394272 OR11H1Q8NG94 326 aa15.45■□□□□ 0.06
HDDC3-202ENST00000394272 RHPN1-AS1Q9BWJ2 59 aa15.45■□□□□ 0.06
HDDC3-202ENST00000394272 RPS10P5Q9NQ39 176 aa15.45■□□□□ 0.06
HDDC3-202ENST00000394272 ZNF331Q9NQX6 463 aaPredicted RBP15.45■□□□□ 0.06
HDDC3-202ENST00000394272 PGPEP1LA6NFU8 196 aa15.44■□□□□ 0.06
HDDC3-202ENST00000394272 CHEK1O14757 476 aa15.44■□□□□ 0.06
HDDC3-202ENST00000394272 MEOX2P50222 304 aa15.44■□□□□ 0.06
HDDC3-202ENST00000394272 BTN1A1Q13410 526 aa15.44■□□□□ 0.06
HDDC3-202ENST00000394272 KLF5Q13887 457 aaPredicted RBP15.44■□□□□ 0.06
HDDC3-202ENST00000394272 ADIRFQ15847 76 aa15.44■□□□□ 0.06
HDDC3-202ENST00000394272 C1QL4Q86Z23 238 aa15.44■□□□□ 0.06
HDDC3-202ENST00000394272 C11orf44Q8N8P7 122 aa15.44■□□□□ 0.06
HDDC3-202ENST00000394272 AAMDCQ9H7C9 122 aa15.44■□□□□ 0.06
HDDC3-202ENST00000394272 B4DEV8 164 aa15.44■□□□□ 0.06
HDDC3-202ENST00000394272 CNN1P51911 297 aaKnown RBP15.44■□□□□ 0.06
HDDC3-202ENST00000394272 TAS2R60P59551 318 aa15.44■□□□□ 0.06
HDDC3-202ENST00000394272 CMTM2Q8TAZ6 248 aa15.44■□□□□ 0.06
HDDC3-202ENST00000394272 IGF2BP2-AS1Q96M15 143 aa15.44■□□□□ 0.06
HDDC3-202ENST00000394272 CITED2Q99967 270 aaPredicted RBP15.44■□□□□ 0.06
HDDC3-202ENST00000394272 KLF12Q9Y4X4 402 aa15.44■□□□□ 0.06
HDDC3-202ENST00000394272 LY96Q9Y6Y9 160 aa15.44■□□□□ 0.06
HDDC3-202ENST00000394272 M0R3E3 92 aa15.43■□□□□ 0.06
HDDC3-202ENST00000394272 SLURP1P55000 103 aa15.43■□□□□ 0.06
HDDC3-202ENST00000394272 CENPWQ5EE01 88 aa15.43■□□□□ 0.06
HDDC3-202ENST00000394272 C8orf86Q6ZUL3 223 aa15.43■□□□□ 0.06
HDDC3-202ENST00000394272 OR1N2Q8NGR9 330 aa15.43■□□□□ 0.06
HDDC3-202ENST00000394272 RPH3ALQ9UNE2 315 aa15.43■□□□□ 0.06
HDDC3-202ENST00000394272 DNASE2O00115 360 aaPredicted RBP15.42■□□□□ 0.06
HDDC3-202ENST00000394272 TMEM183BQ1AE95 376 aa15.42■□□□□ 0.06
HDDC3-202ENST00000394272 OCC1Q8TAD7 63 aa15.42■□□□□ 0.06
HDDC3-202ENST00000394272 SLC50A1Q9BRV3 221 aa15.42■□□□□ 0.06
HDDC3-202ENST00000394272 TSSC4Q9Y5U2 329 aaPredicted RBP15.42■□□□□ 0.06
HDDC3-202ENST00000394272 A0A087WWC5 75 aa15.42■□□□□ 0.06
HDDC3-202ENST00000394272 TRAV34A0A0B4J273 112 aa15.42■□□□□ 0.06
HDDC3-202ENST00000394272 ISLRO14498 428 aa15.42■□□□□ 0.06
HDDC3-202ENST00000394272 GNG4P50150 75 aa15.42■□□□□ 0.06
HDDC3-202ENST00000394272 TMEM88Q6PEY1 159 aa15.42■□□□□ 0.06
HDDC3-202ENST00000394272 DPF1Q92782 380 aa15.42■□□□□ 0.06
HDDC3-202ENST00000394272 ARL6IP6Q8N6S5 226 aa15.41■□□□□ 0.06
HDDC3-202ENST00000394272 DUX3Q96PT4 197 aa15.41■□□□□ 0.06
HDDC3-202ENST00000394272 AURKAIP1Q9NWT8 199 aaPredicted RBP15.41■□□□□ 0.06
HDDC3-202ENST00000394272 DIRC3C9JPN6 131 aa15.4■□□□□ 0.06
HDDC3-202ENST00000394272 TSPAN4O14817 238 aa15.4■□□□□ 0.06
HDDC3-202ENST00000394272 IGLV2-8P01709 118 aa15.4■□□□□ 0.06
HDDC3-202ENST00000394272 CBLN2Q8IUK8 224 aa15.4■□□□□ 0.06
HDDC3-202ENST00000394272 TRAV8-2A0A0B4J237 113 aa15.4■□□□□ 0.06
HDDC3-202ENST00000394272 S100A9P06702 114 aaKnown RBP15.4■□□□□ 0.06
HDDC3-202ENST00000394272 HLA-DMBP28068 263 aa15.4■□□□□ 0.06
HDDC3-202ENST00000394272 BMI1P35226 326 aa15.4■□□□□ 0.06
HDDC3-202ENST00000394272 FHL3Q13643 280 aa15.4■□□□□ 0.06
HDDC3-202ENST00000394272 IGFL4Q6B9Z1 124 aa15.4■□□□□ 0.06
HDDC3-202ENST00000394272 GOLT1AQ6ZVE7 132 aa15.4■□□□□ 0.06
HDDC3-202ENST00000394272 ISOC2Q96AB3 205 aa15.4■□□□□ 0.06
HDDC3-202ENST00000394272 RAX2Q96IS3 184 aa15.4■□□□□ 0.06
HDDC3-202ENST00000394272 NIPBLQ6KC79 2804 aaeCLIP15.39■□□□□ 0.05
HDDC3-202ENST00000394272 C2orf70A6NJV1 201 aa15.39■□□□□ 0.05
HDDC3-202ENST00000394272 K7EN84 100 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms