RNA–Protein interactions for RNA: ENST00000393655.3

TFAP2B-202, Transcript of transcription factor AP-2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAP2B, Length 5,773 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2B-202ENST00000393655 NDUFA4O00483 81 aa13.03□□□□□ -0.32
TFAP2B-202ENST00000393655 DKK1O94907 266 aa13.03□□□□□ -0.32
TFAP2B-202ENST00000393655 C1orf194Q5T5A4 169 aa13.03□□□□□ -0.32
TFAP2B-202ENST00000393655 LINC01551Q86U37 167 aa13.03□□□□□ -0.32
TFAP2B-202ENST00000393655 NKAPP1Q8N9T2 125 aa13.03□□□□□ -0.32
TFAP2B-202ENST00000393655 GFRA4Q9GZZ7 299 aa13.03□□□□□ -0.32
TFAP2B-202ENST00000393655 ICE1Q9Y2F5 2266 aa13.03□□□□□ -0.32
TFAP2B-202ENST00000393655 TMEM158Q8WZ71 300 aa13.03□□□□□ -0.32
TFAP2B-202ENST00000393655 IGKV1-16P04430 117 aa13.02□□□□□ -0.32
TFAP2B-202ENST00000393655 SAMD5Q5TGI4 173 aa13.02□□□□□ -0.32
TFAP2B-202ENST00000393655 DLX4Q92988 240 aaPredicted RBP13.02□□□□□ -0.32
TFAP2B-202ENST00000393655 CFHR3Q02985 330 aa13.02□□□□□ -0.32
TFAP2B-202ENST00000393655 ARMS2P0C7Q2 107 aa13.02□□□□□ -0.33
TFAP2B-202ENST00000393655 TRBV24-1A0A075B6N3 115 aa13.02□□□□□ -0.33
TFAP2B-202ENST00000393655 RPP25LQ8N5L8 163 aaKnown RBP13.02□□□□□ -0.33
TFAP2B-202ENST00000393655 KLHDC3Q9BQ90 382 aa13.02□□□□□ -0.33
TFAP2B-202ENST00000393655 ZNF833PQ6ZTB9 187 aa13.01□□□□□ -0.33
TFAP2B-202ENST00000393655 SCN5AQ14524 2016 aa13.01□□□□□ -0.33
TFAP2B-202ENST00000393655 SPINK13Q1W4C9 94 aa13.01□□□□□ -0.33
TFAP2B-202ENST00000393655 TCTEX1D4Q5JR98 221 aa13.01□□□□□ -0.33
TFAP2B-202ENST00000393655 TRIOBPQ9H2D6 2365 aa13.01□□□□□ -0.33
TFAP2B-202ENST00000393655 QRFPP83859 136 aa13.01□□□□□ -0.33
TFAP2B-202ENST00000393655 HIST1H2BKO60814 126 aa13□□□□□ -0.33
TFAP2B-202ENST00000393655 HIST1H2BJP06899 126 aa13□□□□□ -0.33
TFAP2B-202ENST00000393655 HIST1H2BOP23527 126 aa13□□□□□ -0.33
TFAP2B-202ENST00000393655 HIST1H2BBP33778 126 aa13□□□□□ -0.33
TFAP2B-202ENST00000393655 HIST1H2BDP58876 126 aa13□□□□□ -0.33
TFAP2B-202ENST00000393655 HIST1H2BCP62807 126 aa13□□□□□ -0.33
TFAP2B-202ENST00000393655 HIST2H2BEQ16778 126 aa13□□□□□ -0.33
TFAP2B-202ENST00000393655 HIST2H2BFQ5QNW6 126 aaPredicted RBP13□□□□□ -0.33
TFAP2B-202ENST00000393655 HIST1H2BHQ93079 126 aa13□□□□□ -0.33
TFAP2B-202ENST00000393655 HIST1H2BNQ99877 126 aa13□□□□□ -0.33
TFAP2B-202ENST00000393655 HIST1H2BMQ99879 126 aa13□□□□□ -0.33
TFAP2B-202ENST00000393655 IGHV1OR15-1A0A075B7D0 117 aa13□□□□□ -0.33
TFAP2B-202ENST00000393655 ELANEP08246 267 aa13□□□□□ -0.33
TFAP2B-202ENST00000393655 SPXQ9BT56 116 aa13□□□□□ -0.33
TFAP2B-202ENST00000393655 SPTA1P02549 2419 aa12.99□□□□□ -0.33
TFAP2B-202ENST00000393655 TMEM126AQ9H061 195 aa12.99□□□□□ -0.33
TFAP2B-202ENST00000393655 TRAV8-1A0A0A6YYK1 113 aa12.99□□□□□ -0.33
TFAP2B-202ENST00000393655 GAGE12BA1L429 117 aa12.99□□□□□ -0.33
TFAP2B-202ENST00000393655 GAGE7O76087 117 aa12.99□□□□□ -0.33
TFAP2B-202ENST00000393655 GAGE12FP0CL80 117 aa12.99□□□□□ -0.33
TFAP2B-202ENST00000393655 GAGE12GP0CL81 117 aa12.99□□□□□ -0.33
TFAP2B-202ENST00000393655 GAGE12IP0CL82 117 aa12.99□□□□□ -0.33
TFAP2B-202ENST00000393655 THAP8Q8NA92 274 aa12.99□□□□□ -0.33
TFAP2B-202ENST00000393655 CYTL1Q9NRR1 136 aa12.99□□□□□ -0.33
TFAP2B-202ENST00000393655 I3L3M4 83 aa12.99□□□□□ -0.33
TFAP2B-202ENST00000393655 PFN1P07737 140 aaKnown RBP12.99□□□□□ -0.33
TFAP2B-202ENST00000393655 CGB7P0DN87 165 aa12.99□□□□□ -0.33
TFAP2B-202ENST00000393655 DOCK6Q96HP0 2047 aa12.99□□□□□ -0.33
TFAP2B-202ENST00000393655 TMEM141Q96I45 108 aa12.99□□□□□ -0.33
TFAP2B-202ENST00000393655 HOXD3P31249 432 aaPredicted RBP12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 HIST1H4AP62805 103 aaKnown RBP12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 VWC2Q2TAL6 325 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 GAGE2EQ4V326 116 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 MRPL27Q9P0M9 148 aaKnown RBP12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 GAGE2DQ9UEU5 116 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 KLK9Q9UKQ9 250 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 AHCTF1Q8WYP5 2266 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 KNCNA6PVL3 124 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 G3V318 75 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 LMO1P25800 156 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 TEX36Q5VZQ5 186 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 ATRAIDQ6UW56 229 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 GSN-AS1Q9NRJ2 163 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 PAX9P55771 341 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 LINC00205P59089 165 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 PRSS33Q8NF86 280 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 SNHG12Q9BXW3 62 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 MEGF9Q9H1U4 602 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 RP1P56715 2156 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 LINC00311Q8N616 119 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 TMEM243Q9BU79 118 aa12.98□□□□□ -0.33
TFAP2B-202ENST00000393655 C5orf24Q7Z6I8 188 aa12.97□□□□□ -0.33
TFAP2B-202ENST00000393655 NDUFA4L2Q9NRX3 87 aa12.97□□□□□ -0.33
TFAP2B-202ENST00000393655 AMN1Q8IY45 258 aa12.97□□□□□ -0.33
TFAP2B-202ENST00000393655 NDUFAF3Q9BU61 184 aa12.97□□□□□ -0.33
TFAP2B-202ENST00000393655 DMRTC2Q8IXT2 367 aaPredicted RBP12.97□□□□□ -0.33
TFAP2B-202ENST00000393655 BCL6BQ8N143 479 aaPredicted RBP12.97□□□□□ -0.33
TFAP2B-202ENST00000393655 TSSC4Q9Y5U2 329 aaPredicted RBP12.97□□□□□ -0.33
TFAP2B-202ENST00000393655 C2orf82Q6UX34 121 aa12.97□□□□□ -0.33
TFAP2B-202ENST00000393655 ZNF492Q9P255 531 aa12.97□□□□□ -0.33
TFAP2B-202ENST00000393655 DICER1Q9UPY3 1922 aaKnown RBP12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 LY6G6EA0A0G2JKS1 128 aa12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 LOXP28300 417 aaPredicted RBP12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 CDKN1BP46527 198 aa12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 U3KQA8 63 aa12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 GREB1Q4ZG55 1949 aa12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 IGHV3-16A0A0C4DH30 117 aa12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 H3BUA1 57 aa12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 TNFRSF6BO95407 300 aa12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 GUSBP1Q15486 140 aa12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 MLANAQ16655 118 aa12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 HS3ST6Q96QI5 342 aa12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 TMEM14BQ9NUH8 114 aa12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 SMKR1H3BMG3 65 aa12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 PMVKQ15126 192 aa12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 NEGR1Q7Z3B1 354 aa12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 SBF1O95248 1867 aa12.96□□□□□ -0.33
TFAP2B-202ENST00000393655 RALGAPA1Q6GYQ0 2036 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms