RNA–Protein interactions for RNA: ENST00000392521.6

CIT-203, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CIT, Length 8,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-203ENST00000392521 LIME1Q9H400 295 aa9.77□□□□□ -0.85
CIT-203ENST00000392521 ADAMTS7Q9UKP4 1686 aa9.77□□□□□ -0.85
CIT-203ENST00000392521 IGHV3-16A0A0C4DH30 117 aa9.77□□□□□ -0.85
CIT-203ENST00000392521 FOXF2Q12947 444 aa9.76□□□□□ -0.85
CIT-203ENST00000392521 TRAV12-1A0A0B4J245 112 aa9.76□□□□□ -0.85
CIT-203ENST00000392521 TMEM178BH3BS89 294 aa9.76□□□□□ -0.85
CIT-203ENST00000392521 RPRMLQ8N4K4 120 aa9.76□□□□□ -0.85
CIT-203ENST00000392521 FAM110DQ8TAY7 271 aaPredicted RBP9.76□□□□□ -0.85
CIT-203ENST00000392521 ZSWIM8A7E2V4 1837 aa9.76□□□□□ -0.85
CIT-203ENST00000392521 DENND4CQ5VZ89 1909 aa9.76□□□□□ -0.85
CIT-203ENST00000392521 SYNJ2BPP57105 145 aa9.76□□□□□ -0.85
CIT-203ENST00000392521 TRGV9Q99603 122 aa9.76□□□□□ -0.85
CIT-203ENST00000392521 RMI2Q96E14 147 aa9.76□□□□□ -0.85
CIT-203ENST00000392521 SELLP14151 372 aa9.76□□□□□ -0.85
CIT-203ENST00000392521 TIMP3P35625 211 aa9.76□□□□□ -0.85
CIT-203ENST00000392521 MDS2Q8NDY4 140 aa9.76□□□□□ -0.85
CIT-203ENST00000392521 A0A1W2PR77 199 aa9.75□□□□□ -0.85
CIT-203ENST00000392521 C9orf153Q5TBE3 101 aa9.75□□□□□ -0.85
CIT-203ENST00000392521 Q71RC1 249 aaPredicted RBP9.75□□□□□ -0.85
CIT-203ENST00000392521 LY6G5BQ8NDX9 201 aa9.75□□□□□ -0.85
CIT-203ENST00000392521 FBLIM1Q8WUP2 373 aa9.75□□□□□ -0.85
CIT-203ENST00000392521 SMKR1H3BMG3 65 aa9.75□□□□□ -0.85
CIT-203ENST00000392521 BUB1B-PAK6H3BSN5 160 aa9.75□□□□□ -0.85
CIT-203ENST00000392521 NUP35Q8NFH5 326 aa9.75□□□□□ -0.85
CIT-203ENST00000392521 UBL5Q9BZL1 73 aa9.75□□□□□ -0.85
CIT-203ENST00000392521 AZU1P20160 251 aa9.75□□□□□ -0.85
CIT-203ENST00000392521 C9orf139Q6ZV77 190 aa9.75□□□□□ -0.85
CIT-203ENST00000392521 ZNF106Q9H2Y7 1883 aaKnown RBP9.75□□□□□ -0.85
CIT-203ENST00000392521 A6NNC1 897 aa9.75□□□□□ -0.85
CIT-203ENST00000392521 DKK1O94907 266 aa9.75□□□□□ -0.85
CIT-203ENST00000392521 KLF5Q13887 457 aaPredicted RBP9.75□□□□□ -0.85
CIT-203ENST00000392521 TRPT1Q86TN4 253 aaKnown RBP9.75□□□□□ -0.85
CIT-203ENST00000392521 NRXN2Q9P2S2 1712 aa9.74□□□□□ -0.85
CIT-203ENST00000392521 M0R1W7 72 aa9.74□□□□□ -0.85
CIT-203ENST00000392521 SPINK8P0C7L1 97 aa9.74□□□□□ -0.85
CIT-203ENST00000392521 HAMPP81172 84 aa9.74□□□□□ -0.85
CIT-203ENST00000392521 KLF17Q5JT82 389 aaPredicted RBP9.74□□□□□ -0.85
CIT-203ENST00000392521 BMPERQ8N8U9 685 aa9.74□□□□□ -0.85
CIT-203ENST00000392521 DEFB105AQ8NG35 78 aa9.74□□□□□ -0.85
CIT-203ENST00000392521 XCL2Q9UBD3 114 aa9.74□□□□□ -0.85
CIT-203ENST00000392521 DEFB131AP59861 70 aa9.74□□□□□ -0.85
CIT-203ENST00000392521 UBE2BP63146 152 aa9.74□□□□□ -0.85
CIT-203ENST00000392521 SUPT4H1P63272 117 aaKnown RBP9.74□□□□□ -0.85
CIT-203ENST00000392521 SCRT2Q9NQ03 307 aa9.74□□□□□ -0.85
CIT-203ENST00000392521 IGLV3-21P80748 117 aaPredicted RBP9.74□□□□□ -0.85
CIT-203ENST00000392521 C5orf64Q2M2E5 130 aa9.74□□□□□ -0.85
CIT-203ENST00000392521 PRR31Q5SQ13 230 aa9.74□□□□□ -0.85
CIT-203ENST00000392521 RNF126Q9BV68 326 aa9.74□□□□□ -0.85
CIT-203ENST00000392521 A0A1B0GWJ7 208 aa9.74□□□□□ -0.85
CIT-203ENST00000392521 EGR2P11161 476 aaPredicted RBP9.74□□□□□ -0.85
CIT-203ENST00000392521 MBD3L4A6NDZ8 208 aaPredicted RBP9.74□□□□□ -0.85
CIT-203ENST00000392521 MBD3L3A6NE82 208 aaPredicted RBP9.74□□□□□ -0.85
CIT-203ENST00000392521 MBD3L5A6NJ08 208 aaPredicted RBP9.74□□□□□ -0.85
CIT-203ENST00000392521 MBD3L2Q8NHZ7 208 aaPredicted RBP9.74□□□□□ -0.85
CIT-203ENST00000392521 CACNA1HO95180 2353 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 IL17RELQ6ZVW7 336 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 CITED1Q99966 193 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 MRPL52Q86TS9 123 aaKnown RBP9.73□□□□□ -0.85
CIT-203ENST00000392521 LYZL4Q96KX0 146 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 NDUFAF3Q9BU61 184 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 HIST1H2BKO60814 126 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 HIST1H2BJP06899 126 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 HIST1H2BOP23527 126 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 HIST1H2BBP33778 126 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 HIST1H2BDP58876 126 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 HIST1H2BCP62807 126 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 HIST2H2BEQ16778 126 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.73□□□□□ -0.85
CIT-203ENST00000392521 C10orf55Q5SWW7 151 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 IGFL4Q6B9Z1 124 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 HIST1H2BHQ93079 126 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 HIST1H2BNQ99877 126 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 HIST1H2BMQ99879 126 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 SMIM2Q9BVW6 85 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 A0A0G2JNJ9 132 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 SAA4P35542 130 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 Q9UFV3 132 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 CLPSL2Q6UWE3 100 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 RHPN1-AS1Q9BWJ2 59 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 LTBP4Q8N2S1 1624 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 CFHR1Q03591 330 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 TMEM105Q8N8V8 129 aa9.73□□□□□ -0.85
CIT-203ENST00000392521 DAZ1Q9NQZ3 744 aaKnown RBP9.73□□□□□ -0.85
CIT-203ENST00000392521 SORL1Q92673 2214 aa9.72□□□□□ -0.85
CIT-203ENST00000392521 RNF223E7ERA6 249 aa9.72□□□□□ -0.85
CIT-203ENST00000392521 KIR3DS1Q14943 382 aa9.72□□□□□ -0.85
CIT-203ENST00000392521 SIPA1L1O43166 1804 aa9.72□□□□□ -0.85
CIT-203ENST00000392521 GAGE12JA6NER3 117 aa9.72□□□□□ -0.85
CIT-203ENST00000392521 GAGE1Q13065 139 aa9.72□□□□□ -0.85
CIT-203ENST00000392521 GAGE4Q13068 117 aa9.72□□□□□ -0.85
CIT-203ENST00000392521 GAGE5Q13069 117 aa9.72□□□□□ -0.85
CIT-203ENST00000392521 SPINK13Q1W4C9 94 aa9.72□□□□□ -0.85
CIT-203ENST00000392521 VWC2Q2TAL6 325 aa9.72□□□□□ -0.85
CIT-203ENST00000392521 RIF1Q5UIP0 2472 aaKnown RBP9.72□□□□□ -0.85
CIT-203ENST00000392521 TGFBR3LH3BV60 316 aa9.72□□□□□ -0.85
CIT-203ENST00000392521 TCF15Q12870 199 aa9.72□□□□□ -0.85
CIT-203ENST00000392521 CT83Q5H943 113 aa9.72□□□□□ -0.85
CIT-203ENST00000392521 CHKB-CPT1BH3BT56 60 aa9.72□□□□□ -0.85
CIT-203ENST00000392521 IGHG4P01861 327 aa9.72□□□□□ -0.85
CIT-203ENST00000392521 TMEM190Q8WZ59 177 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms