RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 CANT1Q8WVQ1 401 aa0.37□□□□□ -2.35
RNU6-39P-201ENST00000384344 YPEL2Q96QA6 119 aa0.37□□□□□ -2.35
RNU6-39P-201ENST00000384344 PRADC1Q9BSG0 188 aa0.37□□□□□ -2.35
RNU6-39P-201ENST00000384344 LRRC7Q96NW7 1537 aa0.37□□□□□ -2.35
RNU6-39P-201ENST00000384344 DOCK5Q9H7D0 1870 aa0.37□□□□□ -2.35
RNU6-39P-201ENST00000384344 TNS3Q68CZ2 1445 aa0.37□□□□□ -2.35
RNU6-39P-201ENST00000384344 ABCA4P78363 2273 aa0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 CEP192Q8TEP8 1941 aa0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 BAZ1AQ9NRL2 1556 aaPredicted RBP0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 TAF1LQ8IZX4 1826 aa0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 A0A087WUJ7 227 aa0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 SNRNP200O75643 2136 aaKnown RBP0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 KLF7O75840 302 aaPredicted RBP0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 LINC00575Q6W349 94 aa0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 GRINAQ7Z429 371 aa0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 C12orf45Q8N5I9 185 aaPredicted RBP0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 SLC25A40Q8TBP6 338 aa0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 ADAT3Q96EY9 351 aaPredicted RBP0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 ARL5BQ96KC2 179 aa0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 PRO3102Q9H379 93 aa0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 C10orf95Q9H7T3 257 aa0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 UQCC1Q9NVA1 299 aa0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 TAS2R7Q9NYW3 318 aa0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 GLTPQ9NZD2 209 aa0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 PTPRQQ9UMZ3 2332 aa0.36□□□□□ -2.35
RNU6-39P-201ENST00000384344 A8MWV9 139 aa0.35□□□□□ -2.35
RNU6-39P-201ENST00000384344 TIMM17BO60830 172 aa0.35□□□□□ -2.35
RNU6-39P-201ENST00000384344 MYL5Q02045 173 aa0.35□□□□□ -2.35
RNU6-39P-201ENST00000384344 KRR1Q13601 381 aaKnown RBP0.35□□□□□ -2.35
RNU6-39P-201ENST00000384344 SPINK9Q5DT21 86 aa0.35□□□□□ -2.35
RNU6-39P-201ENST00000384344 HAGHLQ6PII5 290 aaPredicted RBP0.35□□□□□ -2.35
RNU6-39P-201ENST00000384344 C4orf22Q6V702 233 aa0.35□□□□□ -2.35
RNU6-39P-201ENST00000384344 TEN1Q86WV5 123 aa0.35□□□□□ -2.35
RNU6-39P-201ENST00000384344 OR52L1Q8NGH7 329 aa0.35□□□□□ -2.35
RNU6-39P-201ENST00000384344 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.35□□□□□ -2.35
RNU6-39P-201ENST00000384344 CHCHD2Q9Y6H1 151 aaPredicted RBP0.35□□□□□ -2.35
RNU6-39P-201ENST00000384344 LY96Q9Y6Y9 160 aa0.35□□□□□ -2.35
RNU6-39P-201ENST00000384344 ECM29Q5VYK3 1845 aa0.35□□□□□ -2.35
RNU6-39P-201ENST00000384344 SCN3AQ9NY46 2000 aa0.35□□□□□ -2.35
RNU6-39P-201ENST00000384344 KCPQ6ZWJ8 1503 aa0.34□□□□□ -2.35
RNU6-39P-201ENST00000384344 E9PCH4 1651 aa0.34□□□□□ -2.35
RNU6-39P-201ENST00000384344 H3BRM9 83 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 SBF1O95248 1867 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 RPS17P08708 135 aaKnown RBP0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 SPA17Q15506 151 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 TMEM97Q5BJF2 176 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 BCL2L15Q5TBC7 163 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 OR51A2Q8NGJ7 313 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 PRUNE2Q8WUY3 3088 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 PSMF1Q92530 271 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 BTF3L4Q96K17 158 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 LINC00052Q96N35 136 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 PRRT1Q99946 306 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 TMEM133Q9H2Q1 129 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 MED29Q9NX70 200 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 IDI2-AS1Q9NZ38 188 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 PRELID3BQ9Y3B1 194 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 CHD7Q9P2D1 2997 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 CADP27708 2225 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 DENND4CQ5VZ89 1909 aa0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 COL1A1P02452 1464 aaPredicted RBP0.34□□□□□ -2.36
RNU6-39P-201ENST00000384344 ADCY9O60503 1353 aa0.33□□□□□ -2.36
RNU6-39P-201ENST00000384344 NCOA1Q15788 1441 aa0.33□□□□□ -2.36
RNU6-39P-201ENST00000384344 MYCBP2O75592 4640 aa0.33□□□□□ -2.36
RNU6-39P-201ENST00000384344 F8W1H4 67 aa0.33□□□□□ -2.36
RNU6-39P-201ENST00000384344 NIPSNAP2O75323 286 aa0.33□□□□□ -2.36
RNU6-39P-201ENST00000384344 AESQ08117 197 aa0.33□□□□□ -2.36
RNU6-39P-201ENST00000384344 OR11H6Q8NGC7 330 aa0.33□□□□□ -2.36
RNU6-39P-201ENST00000384344 OR5D14Q8NGL3 314 aa0.33□□□□□ -2.36
RNU6-39P-201ENST00000384344 OR10AC1Q8NH08 325 aa0.33□□□□□ -2.36
RNU6-39P-201ENST00000384344 GNPDA2Q8TDQ7 276 aa0.33□□□□□ -2.36
RNU6-39P-201ENST00000384344 SLC25A21Q9BQT8 299 aaPredicted RBP0.33□□□□□ -2.36
RNU6-39P-201ENST00000384344 TMEM138Q9NPI0 162 aa0.33□□□□□ -2.36
RNU6-39P-201ENST00000384344 DOCK3Q8IZD9 2030 aa0.33□□□□□ -2.36
RNU6-39P-201ENST00000384344 HRNRQ86YZ3 2850 aaPredicted RBP0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 LAMA5O15230 3695 aa0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 LRP2P98164 4655 aa0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 KIF13AQ9H1H9 1805 aa0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 TRAV10A0A0B4J240 114 aa0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 NDUFB3O43676 98 aa0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 LYPLA2O95372 231 aa0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 ERP29P30040 261 aaKnown RBP0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 C22orf39Q6P5X5 142 aa0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 KRTAP26-1Q6PEX3 210 aa0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 PDZD9Q8IXQ8 264 aa0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 Q8IYB0 196 aa0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 PPP1R14BQ96C90 147 aa0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 KIFC1Q9BW19 673 aa0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 RNASE7Q9H1E1 156 aaKnown RBP0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 PCTPQ9UKL6 214 aa0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 COL4A6Q14031 1691 aa0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 ZMYM4Q5VZL5 1548 aa0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 MCM3APO60318 1980 aa0.32□□□□□ -2.36
RNU6-39P-201ENST00000384344 LRP1BQ9NZR2 4599 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 PIK3C2GO75747 1445 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 FMN1Q68DA7 1419 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 CACNA1EQ15878 2313 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 RALGAPBQ86X10 1494 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 STARD9Q9P2P6 4700 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 SMIM9A6NGZ8 99 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms