RNA–Protein interactions for RNA: ENST00000379868.5

DDX58-201, Transcript of DExD/H-box helicase 58, humanhuman

TSL 5 BASIC

Gene DDX58, Length 4,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-201ENST00000379868 XKRY2A2RUG3 117 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 F5H697 171 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 CBLN1P23435 193 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 ZNF502Q8TBZ5 544 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 C4orf3Q8WVX3 66 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 FRZBQ92765 325 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 LINC01587Q99440 93 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 CRYBB3P26998 211 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 PAX9P55771 341 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 ERVFC1-1P60608 527 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 YPEL3P61236 119 aaPredicted RBP4.36□□□□□ -1.71
DDX58-201ENST00000379868 OXLD1Q5BKU9 147 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 SPATA31B1PQ5VZV4 182 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 Q8N6K4 173 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 SEPSECSQ9HD40 501 aaKnown RBP4.36□□□□□ -1.71
DDX58-201ENST00000379868 RPS10P5Q9NQ39 176 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 TRAV34A0A0B4J273 112 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 M0R3E3 92 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 CTSGP08311 255 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 SMIM17P0DL12 118 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 RIPPLY3P57055 190 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 SSBP2P81877 361 aaPredicted RBP4.36□□□□□ -1.71
DDX58-201ENST00000379868 NHLRC2Q8NBF2 726 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 GPR82Q96P67 336 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 SLC50A1Q9BRV3 221 aa4.36□□□□□ -1.71
DDX58-201ENST00000379868 PSMG3Q9BT73 122 aaPredicted RBP4.36□□□□□ -1.71
DDX58-201ENST00000379868 IGHV7-4-1A0A0J9YVY3 117 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 CRYGCP07315 174 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 USF2Q15853 346 aaPredicted RBP4.35□□□□□ -1.71
DDX58-201ENST00000379868 BSXQ3C1V8 233 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 UNQ9165/PRO28630Q6UXU0 137 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 EXOC3-AS1Q8N2X6 119 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 PRR25Q96S07 402 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 WFDC1Q9HC57 220 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 XCL2Q9UBD3 114 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 SMPXQ9UHP9 88 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 NSD1Q96L73 2696 aaPredicted RBP4.35□□□□□ -1.71
DDX58-201ENST00000379868 I3L2K1 104 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 NDUFA7O95182 113 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 IGKV1-17P01599 117 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 ZNF705DP0CH99 300 aaPredicted RBP4.35□□□□□ -1.71
DDX58-201ENST00000379868 ZNF705BP0CI00 300 aaPredicted RBP4.35□□□□□ -1.71
DDX58-201ENST00000379868 MUC21Q5SSG8 566 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 SAMD13Q5VXD3 122 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 TMEM190Q8WZ59 177 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 Q9H3A6 140 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 MANBALQ9NQG1 85 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 TET2Q6N021 2002 aaPredicted RBP4.35□□□□□ -1.71
DDX58-201ENST00000379868 C2orf70A6NJV1 201 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 COLCA2A8K830 154 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 SPINK4O60575 86 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 NDUFB4O95168 129 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 TAGLN2P37802 199 aaKnown RBP4.35□□□□□ -1.71
DDX58-201ENST00000379868 CD300EQ496F6 205 aaPredicted RBP4.35□□□□□ -1.71
DDX58-201ENST00000379868 FBLN7Q53RD9 439 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 ZNF343Q6P1L6 599 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 FAM159AQ6UWV7 190 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 VSIRQ9H7M9 311 aa4.35□□□□□ -1.71
DDX58-201ENST00000379868 MRPL36Q9P0J6 103 aaKnown RBP4.35□□□□□ -1.71
DDX58-201ENST00000379868 NACAE9PAV3 2078 aa4.34□□□□□ -1.71
DDX58-201ENST00000379868 SERTM2A0A1B0GWG4 89 aa4.34□□□□□ -1.71
DDX58-201ENST00000379868 TMEM89A2RUT3 159 aa4.34□□□□□ -1.71
DDX58-201ENST00000379868 RBFOX3A6NFN3 312 aa4.34□□□□□ -1.71
DDX58-201ENST00000379868 ZNF705GA8MUZ8 300 aaPredicted RBP4.34□□□□□ -1.71
DDX58-201ENST00000379868 C9JQL5 133 aa4.34□□□□□ -1.71
DDX58-201ENST00000379868 DUSP14O95147 198 aaKnown RBP4.34□□□□□ -1.71
DDX58-201ENST00000379868 CMC4P56277 68 aaPredicted RBP4.34□□□□□ -1.71
DDX58-201ENST00000379868 RHEBQ15382 184 aa4.34□□□□□ -1.71
DDX58-201ENST00000379868 TMEM61Q8N0U2 210 aa4.34□□□□□ -1.71
DDX58-201ENST00000379868 RNF182Q8N6D2 247 aa4.34□□□□□ -1.71
DDX58-201ENST00000379868 VAX2Q9UIW0 290 aa4.34□□□□□ -1.71
DDX58-201ENST00000379868 URGCP-MRPS24S4R325 110 aa4.34□□□□□ -1.71
DDX58-201ENST00000379868 KNCNA6PVL3 124 aa4.34□□□□□ -1.71
DDX58-201ENST00000379868 C9JCJ5 164 aa4.34□□□□□ -1.71
DDX58-201ENST00000379868 PSMB8P28062 276 aa4.34□□□□□ -1.71
DDX58-201ENST00000379868 RNASE4P34096 147 aaKnown RBP4.34□□□□□ -1.71
DDX58-201ENST00000379868 SULT1A2P50226 295 aa4.34□□□□□ -1.71
DDX58-201ENST00000379868 GNG5P63218 68 aa4.34□□□□□ -1.71
DDX58-201ENST00000379868 APRG1Q8IVJ8 170 aa4.34□□□□□ -1.71
DDX58-201ENST00000379868 NKX6-2Q9C056 277 aaPredicted RBP4.34□□□□□ -1.71
DDX58-201ENST00000379868 CBY3A6NI87 242 aa4.34□□□□□ -1.72
DDX58-201ENST00000379868 H7BYZ3 331 aa4.34□□□□□ -1.72
DDX58-201ENST00000379868 MT-ND4LP03901 98 aa4.34□□□□□ -1.72
DDX58-201ENST00000379868 SRSF3P84103 164 aaKnown RBP4.34□□□□□ -1.72
DDX58-201ENST00000379868 KRTAP1-1Q07627 177 aa4.34□□□□□ -1.72
DDX58-201ENST00000379868 C5orf17Q8NAS9 161 aa4.34□□□□□ -1.72
DDX58-201ENST00000379868 CCDC140Q96MF4 163 aa4.34□□□□□ -1.72
DDX58-201ENST00000379868 IGKV2-40A0A087WW87 121 aaPredicted RBP4.33□□□□□ -1.72
DDX58-201ENST00000379868 IGKV2D-40P01614 121 aaPredicted RBP4.33□□□□□ -1.72
DDX58-201ENST00000379868 CRYGBP07316 175 aa4.33□□□□□ -1.72
DDX58-201ENST00000379868 ADMP35318 185 aa4.33□□□□□ -1.72
DDX58-201ENST00000379868 TCL1AP56279 114 aa4.33□□□□□ -1.72
DDX58-201ENST00000379868 PROK1P58294 105 aa4.33□□□□□ -1.72
DDX58-201ENST00000379868 MEF2BQ02080 365 aaPredicted RBP4.33□□□□□ -1.72
DDX58-201ENST00000379868 VWC2Q2TAL6 325 aa4.33□□□□□ -1.72
DDX58-201ENST00000379868 DNLZQ5SXM8 178 aa4.33□□□□□ -1.72
DDX58-201ENST00000379868 LCE2DQ5TA82 110 aaPredicted RBP4.33□□□□□ -1.72
DDX58-201ENST00000379868 ASCL2Q99929 193 aa4.33□□□□□ -1.72
DDX58-201ENST00000379868 SHANK2-AS3Q9BTD1 123 aa4.33□□□□□ -1.72
DDX58-201ENST00000379868 GOLT1BQ9Y3E0 138 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms