RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 TMEM183BQ1AE95 376 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 CD300EQ496F6 205 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-201ENST00000379433 PPP1R27Q86WC6 154 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 OR4X1Q8NH49 305 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 YTHDF2Q9Y5A9 579 aaKnown RBP8.62□□□□□ -1.03
NEDD9-201ENST00000379433 PRSS46E5RG02 174 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 NBR2O15453 112 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 ORM1P02763 201 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 COL8A1P27658 744 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 EMP1P54849 157 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 Q6ZN92 141 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 TMEM183AQ8IXX5 376 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 ZNF114Q8NC26 417 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 LINC00574Q9H8X3 128 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 ZNF355PQ9NSJ1 428 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 LINC00527Q9UJ94 153 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 TIMM9Q9Y5J7 89 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 RHOBP62745 196 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 C16orf82Q7Z2V1 217 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 DYNAPQ8N1N2 210 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 VAMP8Q9BV40 100 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 PKIGQ9Y2B9 76 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 SIGLEC9Q9Y336 463 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 COX7A2P2O60397 106 aa8.61□□□□□ -1.03
NEDD9-201ENST00000379433 IGLV1-47P01700 117 aa8.61□□□□□ -1.03
NEDD9-201ENST00000379433 SLC35B1P78383 322 aa8.61□□□□□ -1.03
NEDD9-201ENST00000379433 CD69Q07108 199 aa8.61□□□□□ -1.03
NEDD9-201ENST00000379433 BRD3OSQ6XYD6 125 aa8.61□□□□□ -1.03
NEDD9-201ENST00000379433 LINC00479Q96M42 142 aa8.61□□□□□ -1.03
NEDD9-201ENST00000379433 GPR82Q96P67 336 aa8.61□□□□□ -1.03
NEDD9-201ENST00000379433 MAP1LC3AQ9H492 121 aa8.61□□□□□ -1.03
NEDD9-201ENST00000379433 TNFRSF19Q9NS68 423 aa8.61□□□□□ -1.03
NEDD9-201ENST00000379433 HELZ2Q9BYK8 2649 aaKnown RBP8.61□□□□□ -1.03
NEDD9-201ENST00000379433 TRAV1-1A0A0B4J248 108 aa8.61□□□□□ -1.03
NEDD9-201ENST00000379433 TINCRA0A1B0GVN0 87 aa8.61□□□□□ -1.03
NEDD9-201ENST00000379433 CRYBB3P26998 211 aa8.61□□□□□ -1.03
NEDD9-201ENST00000379433 OR13C6PQ8NH95 151 aa8.61□□□□□ -1.03
NEDD9-201ENST00000379433 SRSF12Q8WXF0 261 aaKnown RBP8.61□□□□□ -1.03
NEDD9-201ENST00000379433 TMEM37Q8WXS4 190 aa8.61□□□□□ -1.03
NEDD9-201ENST00000379433 DPM3Q9P2X0 92 aa8.61□□□□□ -1.03
NEDD9-201ENST00000379433 TEX15Q9BXT5 2789 aa8.61□□□□□ -1.03
NEDD9-201ENST00000379433 FAM90A9PA6NNJ1 464 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 GCHFRP30047 84 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 TCTAP57738 103 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 GNG5P63218 68 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 PRSS8Q16651 343 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 SDF2L1Q9HCN8 221 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 H7BYZ3 331 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 MGST1P10620 155 aaKnown RBP8.6□□□□□ -1.03
NEDD9-201ENST00000379433 LYZP61626 148 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 VWC2Q2TAL6 325 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 TMEM219Q86XT9 240 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 OR5AU1Q8NGC0 362 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 TMEM167AQ8TBQ9 72 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 ZNF418Q8TF45 676 aaPredicted RBP8.6□□□□□ -1.03
NEDD9-201ENST00000379433 FRZBQ92765 325 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 ZNF257Q9Y2Q1 563 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 LSM4Q9Y4Z0 139 aaKnown RBP8.6□□□□□ -1.03
NEDD9-201ENST00000379433 SORL1Q92673 2214 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 PRRC2AP48634 2157 aaKnown RBP8.6□□□□□ -1.03
NEDD9-201ENST00000379433 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.6□□□□□ -1.03
NEDD9-201ENST00000379433 SUB1P53999 127 aaKnown RBP eCLIP8.6□□□□□ -1.03
NEDD9-201ENST00000379433 MFAP2P55001 183 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 RPL23P62829 140 aaKnown RBP8.6□□□□□ -1.03
NEDD9-201ENST00000379433 UBE2L3P68036 154 aaKnown RBP8.6□□□□□ -1.03
NEDD9-201ENST00000379433 ELOBQ15370 118 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 ANXA2RQ3ZCQ2 193 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 SOX21Q9Y651 276 aaPredicted RBP8.6□□□□□ -1.03
NEDD9-201ENST00000379433 SELENOKQ9Y6D0 94 aa8.6□□□□□ -1.03
NEDD9-201ENST00000379433 A0A087WX48 190 aa8.59□□□□□ -1.03
NEDD9-201ENST00000379433 A8MZ25 164 aa8.59□□□□□ -1.03
NEDD9-201ENST00000379433 MPDU1O75352 247 aa8.59□□□□□ -1.03
NEDD9-201ENST00000379433 CXorf1O96002 111 aa8.59□□□□□ -1.03
NEDD9-201ENST00000379433 FXYD3Q14802 87 aa8.59□□□□□ -1.03
NEDD9-201ENST00000379433 C11orf71Q6IPW1 123 aa8.59□□□□□ -1.03
NEDD9-201ENST00000379433 WNK1Q9H4A3 2382 aa8.59□□□□□ -1.03
NEDD9-201ENST00000379433 HECTD1Q9ULT8 2610 aa8.59□□□□□ -1.03
NEDD9-201ENST00000379433 A0A0G2JLM5 398 aa8.59□□□□□ -1.03
NEDD9-201ENST00000379433 J3QR89 54 aa8.59□□□□□ -1.03
NEDD9-201ENST00000379433 MMD2Q8IY49 270 aa8.59□□□□□ -1.03
NEDD9-201ENST00000379433 WNT10AQ9GZT5 417 aa8.59□□□□□ -1.03
NEDD9-201ENST00000379433 FBN2P35556 2912 aa8.59□□□□□ -1.03
NEDD9-201ENST00000379433 GAGE10A6NGK3 116 aa8.59□□□□□ -1.04
NEDD9-201ENST00000379433 ECSCRQ19T08 205 aa8.59□□□□□ -1.04
NEDD9-201ENST00000379433 FAM120AOSQ5T036 256 aa8.59□□□□□ -1.04
NEDD9-201ENST00000379433 BBC3Q96PG8 261 aaPredicted RBP8.59□□□□□ -1.04
NEDD9-201ENST00000379433 MANBALQ9NQG1 85 aa8.59□□□□□ -1.04
NEDD9-201ENST00000379433 IGLC7A0M8Q6 106 aa8.58□□□□□ -1.04
NEDD9-201ENST00000379433 CLDN34H7C241 214 aa8.58□□□□□ -1.04
NEDD9-201ENST00000379433 C2orf83Q53S99 150 aa8.58□□□□□ -1.04
NEDD9-201ENST00000379433 OR10J3Q5JRS4 329 aa8.58□□□□□ -1.04
NEDD9-201ENST00000379433 LINC00305Q7Z4B0 112 aa8.58□□□□□ -1.04
NEDD9-201ENST00000379433 GAGE12JA6NER3 117 aa8.58□□□□□ -1.04
NEDD9-201ENST00000379433 GAGE7O76087 117 aa8.58□□□□□ -1.04
NEDD9-201ENST00000379433 GAGE12FP0CL80 117 aa8.58□□□□□ -1.04
NEDD9-201ENST00000379433 GAGE12GP0CL81 117 aa8.58□□□□□ -1.04
NEDD9-201ENST00000379433 GAGE12IP0CL82 117 aa8.58□□□□□ -1.04
NEDD9-201ENST00000379433 GAGE4Q13068 117 aa8.58□□□□□ -1.04
NEDD9-201ENST00000379433 C10orf113Q5VZT2 155 aa8.58□□□□□ -1.04
NEDD9-201ENST00000379433 CYP2G1PQ6ZSU1 146 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms