RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 X6R8D5 127 aa13.7□□□□□ -0.22
TMEM88B-201ENST00000378821 DEFB4AO15263 64 aa13.69□□□□□ -0.22
TMEM88B-201ENST00000378821 TCTAP57738 103 aa13.69□□□□□ -0.22
TMEM88B-201ENST00000378821 GDF5OSQ5U4N7 250 aa13.69□□□□□ -0.22
TMEM88B-201ENST00000378821 SAMD13Q5VXD3 122 aa13.69□□□□□ -0.22
TMEM88B-201ENST00000378821 OR1L4Q8NGR5 311 aa13.69□□□□□ -0.22
TMEM88B-201ENST00000378821 SMIM3Q9BZL3 60 aa13.69□□□□□ -0.22
TMEM88B-201ENST00000378821 WDR61Q9GZS3 305 aaKnown RBP13.69□□□□□ -0.22
TMEM88B-201ENST00000378821 DNAJC4Q9NNZ3 241 aa13.69□□□□□ -0.22
TMEM88B-201ENST00000378821 A0A087X0K7 114 aa13.68□□□□□ -0.22
TMEM88B-201ENST00000378821 GIPP09681 153 aaPredicted RBP13.68□□□□□ -0.22
TMEM88B-201ENST00000378821 FGL1Q08830 312 aa13.68□□□□□ -0.22
TMEM88B-201ENST00000378821 PFDN5Q99471 154 aa13.68□□□□□ -0.22
TMEM88B-201ENST00000378821 TRAV8-2A0A0B4J237 113 aa13.67□□□□□ -0.22
TMEM88B-201ENST00000378821 IGHV4-28A0A0C4DH34 117 aa13.67□□□□□ -0.22
TMEM88B-201ENST00000378821 H3BMM0 161 aa13.67□□□□□ -0.22
TMEM88B-201ENST00000378821 HLA-DRB4P13762 266 aa13.67□□□□□ -0.22
TMEM88B-201ENST00000378821 Q5BKY6 102 aa13.67□□□□□ -0.22
TMEM88B-201ENST00000378821 IGFL4Q6B9Z1 124 aa13.67□□□□□ -0.22
TMEM88B-201ENST00000378821 SAV1Q9H4B6 383 aaPredicted RBP13.67□□□□□ -0.22
TMEM88B-201ENST00000378821 RNF24Q9Y225 148 aa13.67□□□□□ -0.22
TMEM88B-201ENST00000378821 HLA-DRB4X5D2U9 266 aa13.67□□□□□ -0.22
TMEM88B-201ENST00000378821 TRAV5A0A0B4J249 113 aa13.66□□□□□ -0.22
TMEM88B-201ENST00000378821 C11orf94C9JXX5 98 aa13.66□□□□□ -0.22
TMEM88B-201ENST00000378821 GCSAMLQ5JQS6 135 aa13.66□□□□□ -0.22
TMEM88B-201ENST00000378821 FOXI2Q6ZQN5 318 aa13.66□□□□□ -0.22
TMEM88B-201ENST00000378821 C2CD4CQ8TF44 421 aa13.66□□□□□ -0.22
TMEM88B-201ENST00000378821 ASB13Q8WXK3 278 aa13.66□□□□□ -0.22
TMEM88B-201ENST00000378821 CLUHP3Q96NS8 147 aa13.66□□□□□ -0.22
TMEM88B-201ENST00000378821 WFDC1Q9HC57 220 aa13.66□□□□□ -0.22
TMEM88B-201ENST00000378821 KMT2AQ03164 3969 aa13.66□□□□□ -0.22
TMEM88B-201ENST00000378821 F6UB75 175 aa13.65□□□□□ -0.22
TMEM88B-201ENST00000378821 SNRPCP09234 159 aaKnown RBP13.65□□□□□ -0.22
TMEM88B-201ENST00000378821 BPIFA4PQ86YQ2 179 aa13.65□□□□□ -0.22
TMEM88B-201ENST00000378821 RNF182Q8N6D2 247 aa13.65□□□□□ -0.22
TMEM88B-201ENST00000378821 C1QTNF4Q9BXJ3 329 aa13.65□□□□□ -0.22
TMEM88B-201ENST00000378821 RPRMQ9NS64 109 aa13.65□□□□□ -0.22
TMEM88B-201ENST00000378821 HLA-DMBP28068 263 aa13.64□□□□□ -0.23
TMEM88B-201ENST00000378821 NUTF2P61970 127 aaKnown RBP13.64□□□□□ -0.23
TMEM88B-201ENST00000378821 RPP25LQ8N5L8 163 aaKnown RBP13.64□□□□□ -0.23
TMEM88B-201ENST00000378821 ZNF709Q8N972 641 aa13.64□□□□□ -0.23
TMEM88B-201ENST00000378821 KCNIP2Q9NS61 270 aa13.64□□□□□ -0.23
TMEM88B-201ENST00000378821 CLEC5AQ9NY25 188 aa13.64□□□□□ -0.23
TMEM88B-201ENST00000378821 IGKV3-20P01619 116 aa13.63□□□□□ -0.23
TMEM88B-201ENST00000378821 IGLC2P0DOY2 106 aa13.63□□□□□ -0.23
TMEM88B-201ENST00000378821 AQP10Q96PS8 301 aa13.63□□□□□ -0.23
TMEM88B-201ENST00000378821 APLNQ9ULZ1 77 aa13.63□□□□□ -0.23
TMEM88B-201ENST00000378821 A0A0J9YX75 114 aa13.62□□□□□ -0.23
TMEM88B-201ENST00000378821 C17orf112F2Z3M2 114 aa13.62□□□□□ -0.23
TMEM88B-201ENST00000378821 H3BTX0 84 aa13.62□□□□□ -0.23
TMEM88B-201ENST00000378821 SLC17A3O00476 420 aa13.62□□□□□ -0.23
TMEM88B-201ENST00000378821 IFNA5P01569 189 aa13.62□□□□□ -0.23
TMEM88B-201ENST00000378821 CXCL2P19875 107 aa13.62□□□□□ -0.23
TMEM88B-201ENST00000378821 SPATA31B1PQ5VZV4 182 aa13.62□□□□□ -0.23
TMEM88B-201ENST00000378821 EBLN2Q6P2I7 272 aa13.62□□□□□ -0.23
TMEM88B-201ENST00000378821 LCN15Q6UWW0 184 aa13.62□□□□□ -0.23
TMEM88B-201ENST00000378821 OR2T35Q8NGX2 323 aa13.62□□□□□ -0.23
TMEM88B-201ENST00000378821 PARD6GQ9BYG4 376 aaPredicted RBP13.62□□□□□ -0.23
TMEM88B-201ENST00000378821 G3V3Q6 166 aa13.61□□□□□ -0.23
TMEM88B-201ENST00000378821 H3BQ15 152 aa13.61□□□□□ -0.23
TMEM88B-201ENST00000378821 FAM78BQ5VT40 261 aa13.61□□□□□ -0.23
TMEM88B-201ENST00000378821 ZNF705AQ6ZN79 300 aaPredicted RBP13.61□□□□□ -0.23
TMEM88B-201ENST00000378821 ZNF738Q8NE65 137 aa13.61□□□□□ -0.23
TMEM88B-201ENST00000378821 OR4B1Q8NGF8 309 aa13.61□□□□□ -0.23
TMEM88B-201ENST00000378821 LRRC20Q8TCA0 184 aa13.61□□□□□ -0.23
TMEM88B-201ENST00000378821 SCGB1C1Q8TD33 95 aa13.61□□□□□ -0.23
TMEM88B-201ENST00000378821 NEU1Q99519 415 aa13.61□□□□□ -0.23
TMEM88B-201ENST00000378821 ZNF331Q9NQX6 463 aaPredicted RBP13.61□□□□□ -0.23
TMEM88B-201ENST00000378821 RFNGQ9Y644 331 aa13.61□□□□□ -0.23
TMEM88B-201ENST00000378821 FXYD6-FXYD2A0A087WZ82 144 aa13.6□□□□□ -0.23
TMEM88B-201ENST00000378821 ZNF705FA8MVS1 300 aaPredicted RBP13.6□□□□□ -0.23
TMEM88B-201ENST00000378821 ZNF705DP0CH99 300 aaPredicted RBP13.6□□□□□ -0.23
TMEM88B-201ENST00000378821 ZNF705BP0CI00 300 aaPredicted RBP13.6□□□□□ -0.23
TMEM88B-201ENST00000378821 FXYD7P58549 80 aa13.6□□□□□ -0.23
TMEM88B-201ENST00000378821 MIR17HGQ75NE6 70 aa13.6□□□□□ -0.23
TMEM88B-201ENST00000378821 SLC50A1Q9BRV3 221 aa13.6□□□□□ -0.23
TMEM88B-201ENST00000378821 XCL2Q9UBD3 114 aa13.6□□□□□ -0.23
TMEM88B-201ENST00000378821 VPS13DQ5THJ4 4388 aa13.59□□□□□ -0.23
TMEM88B-201ENST00000378821 TRAV10A0A0B4J240 114 aa13.59□□□□□ -0.23
TMEM88B-201ENST00000378821 A8MTW9 85 aa13.59□□□□□ -0.23
TMEM88B-201ENST00000378821 PRB4P10163 310 aaPredicted RBP13.59□□□□□ -0.23
TMEM88B-201ENST00000378821 PSG3Q16557 428 aa13.59□□□□□ -0.23
TMEM88B-201ENST00000378821 FFAR4Q5NUL3 377 aa13.59□□□□□ -0.23
TMEM88B-201ENST00000378821 Q6ZTC4 211 aa13.59□□□□□ -0.23
TMEM88B-201ENST00000378821 SLC25A2Q9BXI2 301 aa13.59□□□□□ -0.23
TMEM88B-201ENST00000378821 SLC35B3Q9H1N7 401 aa13.59□□□□□ -0.23
TMEM88B-201ENST00000378821 ZNF586Q9NXT0 402 aa13.59□□□□□ -0.23
TMEM88B-201ENST00000378821 TMEM14CQ9P0S9 112 aa13.59□□□□□ -0.23
TMEM88B-201ENST00000378821 FRAS1Q86XX4 4008 aa13.59□□□□□ -0.23
TMEM88B-201ENST00000378821 RNF222A6NCQ9 220 aa13.58□□□□□ -0.24
TMEM88B-201ENST00000378821 IGLL5B9A064 214 aa13.58□□□□□ -0.24
TMEM88B-201ENST00000378821 PYYP10082 97 aa13.58□□□□□ -0.24
TMEM88B-201ENST00000378821 C12orf74Q32Q52 190 aa13.58□□□□□ -0.24
TMEM88B-201ENST00000378821 SAT2Q96F10 170 aaPredicted RBP13.58□□□□□ -0.24
TMEM88B-201ENST00000378821 FAM167A-AS1Q96KT0 104 aa13.58□□□□□ -0.24
TMEM88B-201ENST00000378821 MRPL32Q9BYC8 188 aaKnown RBP13.58□□□□□ -0.24
TMEM88B-201ENST00000378821 TNFSF18Q9UNG2 199 aa13.58□□□□□ -0.24
TMEM88B-201ENST00000378821 CELA1Q9UNI1 258 aa13.58□□□□□ -0.24
TMEM88B-201ENST00000378821 SMIM9A6NGZ8 99 aa13.57□□□□□ -0.24
TMEM88B-201ENST00000378821 CNN1P51911 297 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms