RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 FAM167A-AS1Q96KT0 104 aa10.29□□□□□ -0.76
PRPF18-202ENST00000378572 UHRF2Q96PU4 802 aa10.29□□□□□ -0.76
PRPF18-202ENST00000378572 SHANK2-AS3Q9BTD1 123 aa10.29□□□□□ -0.76
PRPF18-202ENST00000378572 RABAC1Q9UI14 185 aa10.29□□□□□ -0.76
PRPF18-202ENST00000378572 RBMY1BA6NDE4 496 aaKnown RBP10.28□□□□□ -0.76
PRPF18-202ENST00000378572 RBMY1EA6NEQ0 496 aaKnown RBP10.28□□□□□ -0.76
PRPF18-202ENST00000378572 ZNF785A8K8V0 405 aa10.28□□□□□ -0.76
PRPF18-202ENST00000378572 RBMY1DP0C7P1 496 aaKnown RBP10.28□□□□□ -0.76
PRPF18-202ENST00000378572 PSMB3P49720 205 aa10.28□□□□□ -0.76
PRPF18-202ENST00000378572 PPT1P50897 306 aa10.28□□□□□ -0.76
PRPF18-202ENST00000378572 EIF4E3Q8N5X7 224 aaKnown RBP10.28□□□□□ -0.76
PRPF18-202ENST00000378572 TMEM190Q8WZ59 177 aa10.28□□□□□ -0.76
PRPF18-202ENST00000378572 IGHV3-35A0A0C4DH35 117 aa10.27□□□□□ -0.76
PRPF18-202ENST00000378572 HMGB3O15347 200 aaKnown RBP10.27□□□□□ -0.76
PRPF18-202ENST00000378572 ARL14EPLP0DKL9 152 aa10.27□□□□□ -0.76
PRPF18-202ENST00000378572 FGF8P55075 233 aaPredicted RBP10.27□□□□□ -0.76
PRPF18-202ENST00000378572 MORN5Q5VZ52 161 aa10.27□□□□□ -0.76
PRPF18-202ENST00000378572 COMMD7Q86VX2 200 aa10.27□□□□□ -0.76
PRPF18-202ENST00000378572 SLC25A2Q9BXI2 301 aa10.27□□□□□ -0.76
PRPF18-202ENST00000378572 EPPK1P58107 5090 aaKnown RBP10.27□□□□□ -0.77
PRPF18-202ENST00000378572 ZNF98A6NK75 572 aa10.27□□□□□ -0.77
PRPF18-202ENST00000378572 LGALS9O00182 355 aa10.27□□□□□ -0.77
PRPF18-202ENST00000378572 EIF3GO75821 320 aaKnown RBP eCLIP10.27□□□□□ -0.77
PRPF18-202ENST00000378572 S100A1P23297 94 aa10.27□□□□□ -0.77
PRPF18-202ENST00000378572 CBLN1P23435 193 aa10.27□□□□□ -0.77
PRPF18-202ENST00000378572 TAGLN2P37802 199 aaKnown RBP10.27□□□□□ -0.77
PRPF18-202ENST00000378572 CCL20P78556 96 aa10.27□□□□□ -0.77
PRPF18-202ENST00000378572 TMEM61Q8N0U2 210 aa10.27□□□□□ -0.77
PRPF18-202ENST00000378572 SUN5Q8TC36 379 aa10.27□□□□□ -0.77
PRPF18-202ENST00000378572 ZNF503Q96F45 646 aa10.27□□□□□ -0.77
PRPF18-202ENST00000378572 METTL26Q96S19 204 aa10.27□□□□□ -0.77
PRPF18-202ENST00000378572 TMEM167BQ9NRX6 74 aa10.27□□□□□ -0.77
PRPF18-202ENST00000378572 TMEM14CQ9P0S9 112 aa10.27□□□□□ -0.77
PRPF18-202ENST00000378572 U3KQE9 123 aa10.27□□□□□ -0.77
PRPF18-202ENST00000378572 A0A1B0GV50 99 aa10.26□□□□□ -0.77
PRPF18-202ENST00000378572 K7EMT4 169 aa10.26□□□□□ -0.77
PRPF18-202ENST00000378572 IFNA1P01562 189 aa10.26□□□□□ -0.77
PRPF18-202ENST00000378572 CRYBB3P26998 211 aa10.26□□□□□ -0.77
PRPF18-202ENST00000378572 GCHFRP30047 84 aa10.26□□□□□ -0.77
PRPF18-202ENST00000378572 LINC00322Q6ZN03 302 aaPredicted RBP10.26□□□□□ -0.77
PRPF18-202ENST00000378572 SCRT1Q9BWW7 348 aa10.26□□□□□ -0.77
PRPF18-202ENST00000378572 MANBALQ9NQG1 85 aa10.26□□□□□ -0.77
PRPF18-202ENST00000378572 ARL2-SNX15V9GYD0 113 aa10.26□□□□□ -0.77
PRPF18-202ENST00000378572 DNAH1Q9P2D7 4330 aa10.25□□□□□ -0.77
PRPF18-202ENST00000378572 TRAV5A0A0B4J249 113 aa10.25□□□□□ -0.77
PRPF18-202ENST00000378572 OR7C2O60412 319 aa10.25□□□□□ -0.77
PRPF18-202ENST00000378572 NPPCP23582 126 aa10.25□□□□□ -0.77
PRPF18-202ENST00000378572 UQCC3Q6UW78 93 aa10.25□□□□□ -0.77
PRPF18-202ENST00000378572 UNQ9165/PRO28630Q6UXU0 137 aa10.25□□□□□ -0.77
PRPF18-202ENST00000378572 RBPMS2Q6ZRY4 209 aaKnown RBP10.25□□□□□ -0.77
PRPF18-202ENST00000378572 PAXXQ9BUH6 204 aa10.25□□□□□ -0.77
PRPF18-202ENST00000378572 OR51M1Q9H341 326 aa10.25□□□□□ -0.77
PRPF18-202ENST00000378572 SMDT1Q9H4I9 107 aa10.25□□□□□ -0.77
PRPF18-202ENST00000378572 MLXQ9UH92 298 aa10.25□□□□□ -0.77
PRPF18-202ENST00000378572 TMEM213A2RRL7 107 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 A8MWP6 167 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 BUB3O43684 328 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 NDUFS6O75380 124 aaKnown RBP10.24□□□□□ -0.77
PRPF18-202ENST00000378572 GUK1Q16774 197 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 TM4SF20Q53R12 229 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 C1orf194Q5T5A4 169 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 BPIFA4PQ86YQ2 179 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 SLC7A5P1Q8MH63 180 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 GPR82Q96P67 336 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 C20orf24Q9BUV8 137 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 TMPRSS5Q9H3S3 457 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 UFC1Q9Y3C8 167 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 BIRC6Q9NR09 4857 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 LOC102724200A0A096LPH7 203 aaPredicted RBP10.24□□□□□ -0.77
PRPF18-202ENST00000378572 RBFOX3A6NFN3 312 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 MRPS12O15235 138 aaKnown RBP10.24□□□□□ -0.77
PRPF18-202ENST00000378572 BCL2P10415 239 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 RPL7P18124 248 aaKnown RBP10.24□□□□□ -0.77
PRPF18-202ENST00000378572 ZNF506Q5JVG8 444 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 IQCF2Q8IXL9 164 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 NARS2Q96I59 477 aaKnown RBP10.24□□□□□ -0.77
PRPF18-202ENST00000378572 TXNDC17Q9BRA2 123 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 DAZ1Q9NQZ3 744 aaKnown RBP10.24□□□□□ -0.77
PRPF18-202ENST00000378572 GNG13Q9P2W3 67 aa10.24□□□□□ -0.77
PRPF18-202ENST00000378572 LOC102723971A0A1B0GUV8 181 aa10.23□□□□□ -0.77
PRPF18-202ENST00000378572 A0A1W2PS18 150 aa10.23□□□□□ -0.77
PRPF18-202ENST00000378572 CXorf65A6NEN9 183 aa10.23□□□□□ -0.77
PRPF18-202ENST00000378572 CD5P06127 495 aa10.23□□□□□ -0.77
PRPF18-202ENST00000378572 UBE2L3P68036 154 aaKnown RBP10.23□□□□□ -0.77
PRPF18-202ENST00000378572 FXYD5Q96DB9 178 aa10.23□□□□□ -0.77
PRPF18-202ENST00000378572 IGHV3OR16-8A0A075B7F1 116 aa10.22□□□□□ -0.77
PRPF18-202ENST00000378572 HIST1H1EP10412 219 aaKnown RBP10.22□□□□□ -0.77
PRPF18-202ENST00000378572 TOR2AQ5JU69 321 aa10.22□□□□□ -0.77
PRPF18-202ENST00000378572 LEMD1Q68G75 181 aa10.22□□□□□ -0.77
PRPF18-202ENST00000378572 IGHV7-4-1A0A0J9YVY3 117 aa10.21□□□□□ -0.77
PRPF18-202ENST00000378572 A0A1W2PRE2 83 aa10.21□□□□□ -0.77
PRPF18-202ENST00000378572 IGLC2P0DOY2 106 aa10.21□□□□□ -0.77
PRPF18-202ENST00000378572 PYYP10082 97 aa10.21□□□□□ -0.77
PRPF18-202ENST00000378572 PEA15Q15121 130 aa10.21□□□□□ -0.77
PRPF18-202ENST00000378572 OR8I2Q8N0Y5 310 aa10.21□□□□□ -0.77
PRPF18-202ENST00000378572 GRAMD2BQ96HH9 432 aa10.21□□□□□ -0.77
PRPF18-202ENST00000378572 EIF5A2Q9GZV4 153 aaKnown RBP10.21□□□□□ -0.77
PRPF18-202ENST00000378572 TMEM231Q9H6L2 316 aa10.21□□□□□ -0.77
PRPF18-202ENST00000378572 VAX2Q9UIW0 290 aa10.21□□□□□ -0.77
PRPF18-202ENST00000378572 OR10J4P0C629 311 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms