RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 PNRC2Q9NPJ4 139 aaKnown RBP7.22□□□□□ -1.25
LIG3-202ENST00000378526 HAX1O00165 279 aa7.21□□□□□ -1.25
LIG3-202ENST00000378526 RNASE8Q8TDE3 154 aaKnown RBP7.21□□□□□ -1.25
LIG3-202ENST00000378526 I3L3M4 83 aa7.21□□□□□ -1.25
LIG3-202ENST00000378526 SPINK14Q6IE38 97 aa7.21□□□□□ -1.25
LIG3-202ENST00000378526 DTX4Q9Y2E6 619 aa7.21□□□□□ -1.25
LIG3-202ENST00000378526 LINC00271P0C7V0 271 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 RPL39P5Q59GN2 51 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 LRRC75A-AS1Q8N1F1 130 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 WDR83OSQ9Y284 106 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 DENND4CQ5VZ89 1909 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 AGFG2O95081 481 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 PRSS46E5RG02 174 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 H0YIZ8 118 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 IGLC1P0CG04 106 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 ZNF493Q6ZR52 646 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 ZNF784Q8NCA9 323 aaPredicted RBP7.21□□□□□ -1.26
LIG3-202ENST00000378526 CCL4L1Q8NHW4 92 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 ZPLD1Q8TCW7 415 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 SPTY2D1-AS1A0A0U1RR47 76 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.21□□□□□ -1.26
LIG3-202ENST00000378526 SH2D1AO60880 128 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 LINC01555Q8NAE3 123 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 C1orf159Q96HA4 380 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 PCNX1Q96RV3 2341 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 C17orf98A8MV24 154 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 CTSBP07858 339 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 PRSS57Q6UWY2 283 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 SLC25A28Q96A46 364 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 IMMP1LQ96LU5 166 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 UCN2Q96RP3 112 aa7.21□□□□□ -1.26
LIG3-202ENST00000378526 CACNA1EQ15878 2313 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 IGHV3-66A0A0C4DH42 116 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 CXCL10P02778 98 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 HERVK_113P63121 156 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 CCL8P80075 99 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 ATP5EP2Q5VTU8 51 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 CTGFP29279 349 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 PEBP1P30086 187 aaKnown RBP7.2□□□□□ -1.26
LIG3-202ENST00000378526 LINC01620Q4KN68 170 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 Q6ZNB5 142 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 DPM3Q9P2X0 92 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 H3BT86 120 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 ZNF492Q9P255 531 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 LTBP4Q8N2S1 1624 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 RICTORQ6R327 1708 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 KLK10O43240 276 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 VWA8A3KMH1 1905 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 TRBV19A0A075B6N1 114 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 ZNF474Q6S9Z5 364 aaPredicted RBP7.2□□□□□ -1.26
LIG3-202ENST00000378526 AMTNQ6UX39 209 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 CLEC19AQ6UXS0 136 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 ITLN1Q8WWA0 313 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 PYGO2Q9BRQ0 406 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 NDUFA12Q9UI09 145 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 BMPERQ8N8U9 685 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 SMIM2Q9BVW6 85 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 TP53TG1Q9Y2A0 90 aa7.2□□□□□ -1.26
LIG3-202ENST00000378526 IGHV5-51A0A0C4DH38 117 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 A6NED7 52 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 CD55P08174 381 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 CR1LQ2VPA4 569 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 SMIM27A0A1W2PRY6 76 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 ZNF561-AS1K7EIQ3 104 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 NDUFA7O95182 113 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 NOVP48745 357 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 NRN1LQ496H8 165 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 SH2D6Q7Z4S9 175 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 Q8NFD4 153 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 WFDC1Q9HC57 220 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 J3QQQ9 107 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 NREPQ16612 68 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 TREML4Q6UXN2 200 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 RNF183Q96D59 192 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 LILRA1O75019 489 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 MRPS36P82909 103 aaKnown RBP7.19□□□□□ -1.26
LIG3-202ENST00000378526 ZIC4Q8N9L1 334 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 LINC00312Q9Y6C7 94 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 LTBP3Q9NS15 1303 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 M0R1W7 72 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 ELANEP08246 267 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 KLF14Q8TD94 323 aaPredicted RBP7.19□□□□□ -1.26
LIG3-202ENST00000378526 NBR2O15453 112 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 HMGA1P17096 107 aaKnown RBP7.19□□□□□ -1.26
LIG3-202ENST00000378526 PPIFP30405 207 aaKnown RBP7.19□□□□□ -1.26
LIG3-202ENST00000378526 CYTL1Q9NRR1 136 aa7.19□□□□□ -1.26
LIG3-202ENST00000378526 HIGD2BQ4VC39 106 aa7.18□□□□□ -1.26
LIG3-202ENST00000378526 CRYGSP22914 178 aa7.18□□□□□ -1.26
LIG3-202ENST00000378526 PRB3Q04118 309 aaPredicted RBP7.18□□□□□ -1.26
LIG3-202ENST00000378526 SLC25A29Q8N8R3 303 aa7.18□□□□□ -1.26
LIG3-202ENST00000378526 CFHR4Q92496 578 aa7.18□□□□□ -1.26
LIG3-202ENST00000378526 IMUPQ9GZP8 106 aa7.18□□□□□ -1.26
LIG3-202ENST00000378526 PRR33A8MZF0 331 aa7.18□□□□□ -1.26
LIG3-202ENST00000378526 IGKV1D-33P01593 117 aa7.18□□□□□ -1.26
LIG3-202ENST00000378526 IGKV1-33P01594 117 aa7.18□□□□□ -1.26
LIG3-202ENST00000378526 PLXNB3Q9ULL4 1909 aa7.18□□□□□ -1.26
LIG3-202ENST00000378526 F5H768 121 aa7.18□□□□□ -1.26
LIG3-202ENST00000378526 TMEM256-PLSCR3K7ERE1 68 aa7.18□□□□□ -1.26
LIG3-202ENST00000378526 HGFACQ04756 655 aa7.18□□□□□ -1.26
LIG3-202ENST00000378526 PRR30Q53SZ7 412 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms