RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 COX7A2P2O60397 106 aa13.66□□□□□ -0.22
CBWD3-204ENST00000377349 H2AFB2P0C5Z0 115 aa13.66□□□□□ -0.22
CBWD3-204ENST00000377349 P0DMU3 169 aa13.66□□□□□ -0.22
CBWD3-204ENST00000377349 FAM231AP0DMU4 169 aa13.66□□□□□ -0.22
CBWD3-204ENST00000377349 FAM231CP0DMU5 169 aa13.66□□□□□ -0.22
CBWD3-204ENST00000377349 HIST1H1AQ02539 215 aaPredicted RBP13.66□□□□□ -0.22
CBWD3-204ENST00000377349 DMRTA1Q5VZB9 504 aa13.66□□□□□ -0.22
CBWD3-204ENST00000377349 ZNF546Q86UE3 836 aa13.66□□□□□ -0.22
CBWD3-204ENST00000377349 C12orf45Q8N5I9 185 aaPredicted RBP13.66□□□□□ -0.22
CBWD3-204ENST00000377349 NDUFAF3Q9BU61 184 aa13.66□□□□□ -0.22
CBWD3-204ENST00000377349 SMIM9A6NGZ8 99 aa13.65□□□□□ -0.22
CBWD3-204ENST00000377349 K7EPK0 472 aa13.65□□□□□ -0.22
CBWD3-204ENST00000377349 AGPAT2O15120 278 aa13.65□□□□□ -0.22
CBWD3-204ENST00000377349 CST7O76096 145 aa13.65□□□□□ -0.22
CBWD3-204ENST00000377349 DUSP14O95147 198 aaKnown RBP13.65□□□□□ -0.22
CBWD3-204ENST00000377349 RHOBP62745 196 aa13.65□□□□□ -0.22
CBWD3-204ENST00000377349 RRN3P1Q2M238 152 aa13.65□□□□□ -0.22
CBWD3-204ENST00000377349 FAM222AQ5U5X8 452 aa13.65□□□□□ -0.22
CBWD3-204ENST00000377349 C1orf158Q8N1D5 194 aa13.65□□□□□ -0.22
CBWD3-204ENST00000377349 CCDC32Q9BV29 185 aa13.65□□□□□ -0.22
CBWD3-204ENST00000377349 LINC00305Q7Z4B0 112 aa13.64□□□□□ -0.23
CBWD3-204ENST00000377349 CLUHP3Q96NS8 147 aa13.64□□□□□ -0.23
CBWD3-204ENST00000377349 PLA2G2EQ9NZK7 142 aa13.64□□□□□ -0.23
CBWD3-204ENST00000377349 YTHDF2Q9Y5A9 579 aaKnown RBP13.64□□□□□ -0.23
CBWD3-204ENST00000377349 TRAV12-2A0A075B6T6 113 aa13.64□□□□□ -0.23
CBWD3-204ENST00000377349 PRSS29PA6NIE9 313 aa13.64□□□□□ -0.23
CBWD3-204ENST00000377349 FNDC10F2Z333 226 aa13.64□□□□□ -0.23
CBWD3-204ENST00000377349 H3BTX0 84 aa13.64□□□□□ -0.23
CBWD3-204ENST00000377349 M0R2N4 97 aa13.64□□□□□ -0.23
CBWD3-204ENST00000377349 INSP01308 110 aa13.64□□□□□ -0.23
CBWD3-204ENST00000377349 PVALBP20472 110 aaPredicted RBP13.64□□□□□ -0.23
CBWD3-204ENST00000377349 MZT2BQ6NZ67 158 aa13.64□□□□□ -0.23
CBWD3-204ENST00000377349 PATE2Q6UY27 113 aa13.64□□□□□ -0.23
CBWD3-204ENST00000377349 BAP18Q8IXM2 172 aa13.64□□□□□ -0.23
CBWD3-204ENST00000377349 OR11H7Q8NGC8 314 aa13.64□□□□□ -0.23
CBWD3-204ENST00000377349 MGST2Q99735 147 aa13.64□□□□□ -0.23
CBWD3-204ENST00000377349 FAM24AA6NFZ4 105 aa13.63□□□□□ -0.23
CBWD3-204ENST00000377349 MED14OSP0DP75 135 aa13.63□□□□□ -0.23
CBWD3-204ENST00000377349 PLP1P60201 277 aa13.63□□□□□ -0.23
CBWD3-204ENST00000377349 LGALS9BQ3B8N2 356 aa13.63□□□□□ -0.23
CBWD3-204ENST00000377349 AMTNQ6UX39 209 aa13.63□□□□□ -0.23
CBWD3-204ENST00000377349 C2orf50Q96LR7 162 aa13.63□□□□□ -0.23
CBWD3-204ENST00000377349 IGF2BP2-AS1Q96M15 143 aa13.63□□□□□ -0.23
CBWD3-204ENST00000377349 NIPSNAP3BQ9BS92 247 aa13.63□□□□□ -0.23
CBWD3-204ENST00000377349 LRP1BQ9NZR2 4599 aa13.62□□□□□ -0.23
CBWD3-204ENST00000377349 UBE2L5PA0A1B0GUS4 154 aa13.62□□□□□ -0.23
CBWD3-204ENST00000377349 ZNF705GA8MUZ8 300 aaPredicted RBP13.62□□□□□ -0.23
CBWD3-204ENST00000377349 PRM2P04554 102 aa13.62□□□□□ -0.23
CBWD3-204ENST00000377349 CAMLGP49069 296 aa13.62□□□□□ -0.23
CBWD3-204ENST00000377349 RAB31Q13636 194 aa13.62□□□□□ -0.23
CBWD3-204ENST00000377349 C10orf113Q5VZT2 155 aa13.62□□□□□ -0.23
CBWD3-204ENST00000377349 GGACTQ9BVM4 153 aa13.62□□□□□ -0.23
CBWD3-204ENST00000377349 DKK2Q9UBU2 259 aa13.62□□□□□ -0.23
CBWD3-204ENST00000377349 BOLA2-SMG1P6H3BVE0 249 aa13.61□□□□□ -0.23
CBWD3-204ENST00000377349 HTN1P15515 57 aa13.61□□□□□ -0.23
CBWD3-204ENST00000377349 CXCL3P19876 107 aa13.61□□□□□ -0.23
CBWD3-204ENST00000377349 BAXQ07812 192 aa13.61□□□□□ -0.23
CBWD3-204ENST00000377349 Q6ZR54 194 aa13.61□□□□□ -0.23
CBWD3-204ENST00000377349 ENKURQ8TC29 256 aa13.61□□□□□ -0.23
CBWD3-204ENST00000377349 RNF24Q9Y225 148 aa13.61□□□□□ -0.23
CBWD3-204ENST00000377349 A0A087X0K7 114 aa13.6□□□□□ -0.23
CBWD3-204ENST00000377349 TEX48A0A1B0GUV7 120 aa13.6□□□□□ -0.23
CBWD3-204ENST00000377349 DAD1P61803 113 aa13.6□□□□□ -0.23
CBWD3-204ENST00000377349 PSG3Q16557 428 aa13.6□□□□□ -0.23
CBWD3-204ENST00000377349 PXDC1Q5TGL8 231 aa13.6□□□□□ -0.23
CBWD3-204ENST00000377349 MIC13Q5XKP0 118 aa13.6□□□□□ -0.23
CBWD3-204ENST00000377349 NRARPQ7Z6K4 114 aa13.6□□□□□ -0.23
CBWD3-204ENST00000377349 OR8A1Q8NGG7 326 aa13.6□□□□□ -0.23
CBWD3-204ENST00000377349 S100ZQ8WXG8 99 aa13.6□□□□□ -0.23
CBWD3-204ENST00000377349 RPUSD4Q96CM3 377 aaKnown RBP13.6□□□□□ -0.23
CBWD3-204ENST00000377349 UQCC1Q9NVA1 299 aa13.6□□□□□ -0.23
CBWD3-204ENST00000377349 RAB32Q13637 225 aa13.59□□□□□ -0.23
CBWD3-204ENST00000377349 MORN5Q5VZ52 161 aa13.59□□□□□ -0.23
CBWD3-204ENST00000377349 LCN15Q6UWW0 184 aa13.59□□□□□ -0.23
CBWD3-204ENST00000377349 Q6ZRG5 221 aa13.59□□□□□ -0.23
CBWD3-204ENST00000377349 STX12Q86Y82 276 aa13.59□□□□□ -0.23
CBWD3-204ENST00000377349 BPIFA4PQ86YQ2 179 aa13.59□□□□□ -0.23
CBWD3-204ENST00000377349 UBE2DNLQ8IWF7 75 aa13.59□□□□□ -0.23
CBWD3-204ENST00000377349 OPCMLQ14982 345 aa13.58□□□□□ -0.24
CBWD3-204ENST00000377349 TMEM37Q8WXS4 190 aa13.58□□□□□ -0.24
CBWD3-204ENST00000377349 FAM210BQ96KR6 192 aa13.58□□□□□ -0.24
CBWD3-204ENST00000377349 LINC01587Q99440 93 aa13.58□□□□□ -0.24
CBWD3-204ENST00000377349 GPN1Q9HCN4 374 aaPredicted RBP13.58□□□□□ -0.24
CBWD3-204ENST00000377349 IGSF23A1L1A6 192 aa13.57□□□□□ -0.24
CBWD3-204ENST00000377349 LYRM2Q9NU23 88 aaPredicted RBP13.57□□□□□ -0.24
CBWD3-204ENST00000377349 IGLV2-18A0A075B6J9 118 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 A8MTW9 85 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 SLC17A3O00476 420 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 CRXO43186 299 aaPredicted RBP13.56□□□□□ -0.24
CBWD3-204ENST00000377349 DEFB130BP0DP73 79 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 DEFB130AP0DP74 79 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 FGF7P21781 194 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 SULT1A1P50225 295 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 HBG1P69891 147 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 HBG2P69892 147 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 ASAH1Q13510 395 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 SLC50A1Q9BRV3 221 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 TRAV5A0A0B4J249 113 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 J3KRW8 73 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 MRPS12O15235 138 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms