RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 RNF125Q96EQ8 232 aa10.42□□□□□ -0.74
ACTN1-202ENST00000376839 C8orf49Q96NF6 230 aa10.42□□□□□ -0.74
ACTN1-202ENST00000376839 SCRT2Q9NQ03 307 aa10.42□□□□□ -0.74
ACTN1-202ENST00000376839 ONECUT1Q9UBC0 465 aa10.42□□□□□ -0.74
ACTN1-202ENST00000376839 ABCA4P78363 2273 aa10.42□□□□□ -0.74
ACTN1-202ENST00000376839 B9A039 149 aa10.41□□□□□ -0.74
ACTN1-202ENST00000376839 RIGQ13278 110 aa10.41□□□□□ -0.74
ACTN1-202ENST00000376839 CBY1Q9Y3M2 126 aa10.41□□□□□ -0.74
ACTN1-202ENST00000376839 TLN1Q9Y490 2541 aaKnown RBP10.41□□□□□ -0.74
ACTN1-202ENST00000376839 LOC105371242A0A075B767 164 aa10.41□□□□□ -0.74
ACTN1-202ENST00000376839 FCGR2BP31994 310 aaPredicted RBP10.41□□□□□ -0.74
ACTN1-202ENST00000376839 ZNF414Q96IQ9 312 aa10.41□□□□□ -0.74
ACTN1-202ENST00000376839 AP5S1Q9NUS5 200 aa10.41□□□□□ -0.74
ACTN1-202ENST00000376839 HSPB8Q9UJY1 196 aa10.41□□□□□ -0.74
ACTN1-202ENST00000376839 HSBP1L1C9JCN9 74 aa10.4□□□□□ -0.74
ACTN1-202ENST00000376839 NCR2O95944 276 aa10.4□□□□□ -0.74
ACTN1-202ENST00000376839 FAM106CPP0CH98 169 aa10.4□□□□□ -0.74
ACTN1-202ENST00000376839 FOXE3Q13461 319 aa10.4□□□□□ -0.74
ACTN1-202ENST00000376839 C21orf62-AS1Q17RA5 79 aa10.4□□□□□ -0.74
ACTN1-202ENST00000376839 FAM106AQ4KMX7 169 aa10.4□□□□□ -0.74
ACTN1-202ENST00000376839 BVES-AS1Q5T3Y7 98 aa10.4□□□□□ -0.74
ACTN1-202ENST00000376839 HILPDAQ9Y5L2 63 aa10.4□□□□□ -0.74
ACTN1-202ENST00000376839 CD3EP07766 207 aa10.4□□□□□ -0.74
ACTN1-202ENST00000376839 TMSB15BA0A087X1C1 80 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 MUC21A0A0G2JKD1 596 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 MUC21A0A140T8X8 626 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 A0A1W2PRD5 423 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 A0A1W2PRF3 423 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 A0A1W2PRM7 423 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 LOXL1Q08397 574 aaPredicted RBP10.39□□□□□ -0.75
ACTN1-202ENST00000376839 MUC21Q5SSG8 566 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 LINC01545Q5VT33 79 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 GATD1Q8NB37 220 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 LINC01560Q8TB33 94 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 IGHV2-70DA0A0C4DH43 119 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 TAX1BP3O14907 124 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 LY6HO94772 140 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 ZNF747Q9BV97 191 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 SVEP1Q4LDE5 3571 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 A0A087X0K7 114 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 K7EQM0 130 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 RNF5Q99942 180 aa10.39□□□□□ -0.75
ACTN1-202ENST00000376839 SRSF8Q9BRL6 282 aaKnown RBP10.39□□□□□ -0.75
ACTN1-202ENST00000376839 ANKHD1Q8IWZ3 2542 aaKnown RBP10.38□□□□□ -0.75
ACTN1-202ENST00000376839 WI2-2373I1.2A0A1W2PRP0 233 aa10.38□□□□□ -0.75
ACTN1-202ENST00000376839 TMEM213A2RRL7 107 aa10.38□□□□□ -0.75
ACTN1-202ENST00000376839 NBR2O15453 112 aa10.38□□□□□ -0.75
ACTN1-202ENST00000376839 IFI27P40305 119 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-202ENST00000376839 KLRD1Q13241 179 aa10.38□□□□□ -0.75
ACTN1-202ENST00000376839 VAMP3Q15836 100 aa10.38□□□□□ -0.75
ACTN1-202ENST00000376839 FA2HQ7L5A8 372 aa10.38□□□□□ -0.75
ACTN1-202ENST00000376839 LYPD1Q8N2G4 141 aa10.38□□□□□ -0.75
ACTN1-202ENST00000376839 PRSS3P2Q8NHM4 247 aa10.38□□□□□ -0.75
ACTN1-202ENST00000376839 A0A096LNJ9 63 aa10.38□□□□□ -0.75
ACTN1-202ENST00000376839 ARF6P62330 175 aa10.38□□□□□ -0.75
ACTN1-202ENST00000376839 CFHR4Q92496 578 aa10.38□□□□□ -0.75
ACTN1-202ENST00000376839 RNF24Q9Y225 148 aa10.38□□□□□ -0.75
ACTN1-202ENST00000376839 LOC389332A0A1B0GUA5 103 aa10.37□□□□□ -0.75
ACTN1-202ENST00000376839 GRNP28799 593 aaKnown RBP10.37□□□□□ -0.75
ACTN1-202ENST00000376839 ZNF672Q499Z4 452 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-202ENST00000376839 LYZL1Q6UWQ5 148 aa10.37□□□□□ -0.75
ACTN1-202ENST00000376839 CEP295Q9C0D2 2601 aa10.37□□□□□ -0.75
ACTN1-202ENST00000376839 SERTM2A0A1B0GWG4 89 aa10.37□□□□□ -0.75
ACTN1-202ENST00000376839 D6R8Y8 96 aa10.37□□□□□ -0.75
ACTN1-202ENST00000376839 SNAI2O43623 268 aa10.37□□□□□ -0.75
ACTN1-202ENST00000376839 GNG7O60262 68 aa10.37□□□□□ -0.75
ACTN1-202ENST00000376839 FANCD2OSQ96PS1 177 aa10.37□□□□□ -0.75
ACTN1-202ENST00000376839 MS4A6AQ9H2W1 248 aa10.37□□□□□ -0.75
ACTN1-202ENST00000376839 IGKV2-40A0A087WW87 121 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-202ENST00000376839 OR2T8A6NH00 312 aa10.36□□□□□ -0.75
ACTN1-202ENST00000376839 F8W735 103 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-202ENST00000376839 IGKV2D-40P01614 121 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-202ENST00000376839 IGHV3-23P01764 117 aa10.36□□□□□ -0.75
ACTN1-202ENST00000376839 CT45A10P0DMU9 189 aa10.36□□□□□ -0.75
ACTN1-202ENST00000376839 RBX1P62877 108 aa10.36□□□□□ -0.75
ACTN1-202ENST00000376839 AMN1Q8IY45 258 aa10.36□□□□□ -0.75
ACTN1-202ENST00000376839 DEFB125Q8N687 156 aa10.36□□□□□ -0.75
ACTN1-202ENST00000376839 OR4C5Q8NGB2 326 aa10.36□□□□□ -0.75
ACTN1-202ENST00000376839 A0A1B0GW15 77 aa10.36□□□□□ -0.75
ACTN1-202ENST00000376839 SH2D1AO60880 128 aa10.36□□□□□ -0.75
ACTN1-202ENST00000376839 LY6G5BQ8NDX9 201 aa10.36□□□□□ -0.75
ACTN1-202ENST00000376839 OR10AG1Q8NH19 301 aa10.36□□□□□ -0.75
ACTN1-202ENST00000376839 DPM3Q9P2X0 92 aa10.36□□□□□ -0.75
ACTN1-202ENST00000376839 CBY3A6NI87 242 aa10.35□□□□□ -0.75
ACTN1-202ENST00000376839 FXYD7P58549 80 aa10.35□□□□□ -0.75
ACTN1-202ENST00000376839 NDPQ00604 133 aa10.35□□□□□ -0.75
ACTN1-202ENST00000376839 HES1Q14469 280 aa10.35□□□□□ -0.75
ACTN1-202ENST00000376839 Q6AWC8 147 aa10.35□□□□□ -0.75
ACTN1-202ENST00000376839 ZNF493Q6ZR52 646 aa10.35□□□□□ -0.75
ACTN1-202ENST00000376839 C2orf91Q6ZV80 131 aa10.35□□□□□ -0.75
ACTN1-202ENST00000376839 PIP4P2Q8N4L2 257 aa10.35□□□□□ -0.75
ACTN1-202ENST00000376839 SIGLEC8Q9NYZ4 499 aa10.35□□□□□ -0.75
ACTN1-202ENST00000376839 K7EP13 123 aa10.35□□□□□ -0.75
ACTN1-202ENST00000376839 NDUFA3O95167 84 aa10.35□□□□□ -0.75
ACTN1-202ENST00000376839 CSN1S1P47710 185 aa10.35□□□□□ -0.75
ACTN1-202ENST00000376839 C12orf54Q6X4T0 127 aa10.35□□□□□ -0.75
ACTN1-202ENST00000376839 OR8A1Q8NGG7 326 aa10.35□□□□□ -0.75
ACTN1-202ENST00000376839 AAMDCQ9H7C9 122 aa10.35□□□□□ -0.75
ACTN1-202ENST00000376839 IGLV11-55A0A075B6I3 123 aa10.34□□□□□ -0.75
ACTN1-202ENST00000376839 TMEM189A5PLL7 270 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms