RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 RBP4P02753 201 aa11.19□□□□□ -0.62
CLCNKA-202ENST00000375692 DLX6P56179 175 aa11.19□□□□□ -0.62
CLCNKA-202ENST00000375692 TCTAP57738 103 aa11.19□□□□□ -0.62
CLCNKA-202ENST00000375692 PSG9Q00887 426 aa11.19□□□□□ -0.62
CLCNKA-202ENST00000375692 SAPCD1Q5SSQ6 148 aa11.19□□□□□ -0.62
CLCNKA-202ENST00000375692 FAM231BA6NCW3 169 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 IGLC1P0CG04 106 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 IGHV1-8P0DP01 117 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 LINC01545Q5VT33 79 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 FAM71F2Q6NXP2 309 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 TMEM108Q6UXF1 575 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 NUP37Q8NFH4 326 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 CST9LQ9H4G1 147 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 TRAV8-6A0A0B4J262 113 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 C16orf97H3BN30 126 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 GRNP28799 593 aaKnown RBP11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 GPR183P32249 361 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 PLP1P60201 277 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 LOXL1Q08397 574 aaPredicted RBP11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 ZNF747Q9BV97 191 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 AP5S1Q9NUS5 200 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 JKAMPQ9P055 326 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 SIGLEC9Q9Y336 463 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 SELENOKQ9Y6D0 94 aa11.18□□□□□ -0.62
CLCNKA-202ENST00000375692 TNFRSF13BO14836 293 aaPredicted RBP11.17□□□□□ -0.62
CLCNKA-202ENST00000375692 CRIP1P50238 77 aa11.17□□□□□ -0.62
CLCNKA-202ENST00000375692 BSPH1Q075Z2 132 aa11.17□□□□□ -0.62
CLCNKA-202ENST00000375692 C2orf91Q6ZV80 131 aa11.17□□□□□ -0.62
CLCNKA-202ENST00000375692 F11RQ9Y624 299 aaKnown RBP11.17□□□□□ -0.62
CLCNKA-202ENST00000375692 LOC389332A0A1B0GUA5 103 aa11.17□□□□□ -0.62
CLCNKA-202ENST00000375692 TMEM8BA6NDV4 472 aa11.17□□□□□ -0.62
CLCNKA-202ENST00000375692 TEX22C9J3V5 150 aa11.17□□□□□ -0.62
CLCNKA-202ENST00000375692 CRYGBP07316 175 aa11.17□□□□□ -0.62
CLCNKA-202ENST00000375692 C16orf54Q6UWD8 224 aa11.17□□□□□ -0.62
CLCNKA-202ENST00000375692 PRSS3P2Q8NHM4 247 aa11.17□□□□□ -0.62
CLCNKA-202ENST00000375692 MS4A6AQ9H2W1 248 aa11.17□□□□□ -0.62
CLCNKA-202ENST00000375692 FBXL15Q9H469 300 aa11.17□□□□□ -0.62
CLCNKA-202ENST00000375692 SPTAN1Q13813 2472 aaKnown RBP11.16□□□□□ -0.62
CLCNKA-202ENST00000375692 THBDP07204 575 aa11.16□□□□□ -0.62
CLCNKA-202ENST00000375692 FXYD7P58549 80 aa11.16□□□□□ -0.62
CLCNKA-202ENST00000375692 HIST1H1AQ02539 215 aaPredicted RBP11.16□□□□□ -0.62
CLCNKA-202ENST00000375692 TMEM155Q4W5P6 130 aa11.16□□□□□ -0.62
CLCNKA-202ENST00000375692 FAM90A27PA6NNH2 459 aa11.16□□□□□ -0.62
CLCNKA-202ENST00000375692 CD5LO43866 347 aa11.16□□□□□ -0.62
CLCNKA-202ENST00000375692 IFI27P40305 119 aaPredicted RBP11.16□□□□□ -0.62
CLCNKA-202ENST00000375692 OCIAD2Q56VL3 154 aa11.16□□□□□ -0.62
CLCNKA-202ENST00000375692 C8orf31Q8N9H6 132 aa11.16□□□□□ -0.62
CLCNKA-202ENST00000375692 TMEM133Q9H2Q1 129 aa11.16□□□□□ -0.62
CLCNKA-202ENST00000375692 TMSB15BA0A087X1C1 80 aa11.15□□□□□ -0.62
CLCNKA-202ENST00000375692 IGKV1-17P01599 117 aa11.15□□□□□ -0.62
CLCNKA-202ENST00000375692 COX8AP10176 69 aa11.15□□□□□ -0.62
CLCNKA-202ENST00000375692 HOXB4P17483 251 aaPredicted RBP11.15□□□□□ -0.62
CLCNKA-202ENST00000375692 UQCRFS1P47985 274 aa11.15□□□□□ -0.62
CLCNKA-202ENST00000375692 ADORA2A-AS1P86434 159 aa11.15□□□□□ -0.62
CLCNKA-202ENST00000375692 RIGQ13278 110 aa11.15□□□□□ -0.62
CLCNKA-202ENST00000375692 FA2HQ7L5A8 372 aa11.15□□□□□ -0.62
CLCNKA-202ENST00000375692 PPP1R27Q86WC6 154 aa11.15□□□□□ -0.62
CLCNKA-202ENST00000375692 OR8A1Q8NGG7 326 aa11.15□□□□□ -0.62
CLCNKA-202ENST00000375692 RASL11BQ9BPW5 248 aa11.15□□□□□ -0.62
CLCNKA-202ENST00000375692 LRBAP50851 2863 aa11.15□□□□□ -0.62
CLCNKA-202ENST00000375692 ABCA4P78363 2273 aa11.15□□□□□ -0.62
CLCNKA-202ENST00000375692 SERTM2A0A1B0GWG4 89 aa11.15□□□□□ -0.63
CLCNKA-202ENST00000375692 M0R3E3 92 aa11.15□□□□□ -0.63
CLCNKA-202ENST00000375692 VPS25Q9BRG1 176 aa11.15□□□□□ -0.63
CLCNKA-202ENST00000375692 NGBQ9NPG2 151 aa11.15□□□□□ -0.63
CLCNKA-202ENST00000375692 TMEM14CQ9P0S9 112 aa11.15□□□□□ -0.63
CLCNKA-202ENST00000375692 PSG8Q9UQ74 426 aa11.15□□□□□ -0.63
CLCNKA-202ENST00000375692 INSIG2Q9Y5U4 225 aa11.15□□□□□ -0.63
CLCNKA-202ENST00000375692 S4R3C0 116 aa11.15□□□□□ -0.63
CLCNKA-202ENST00000375692 TRBV19A0A075B6N1 114 aa11.14□□□□□ -0.63
CLCNKA-202ENST00000375692 A0A1W2PRD5 423 aa11.14□□□□□ -0.63
CLCNKA-202ENST00000375692 A0A1W2PRF3 423 aa11.14□□□□□ -0.63
CLCNKA-202ENST00000375692 A0A1W2PRM7 423 aa11.14□□□□□ -0.63
CLCNKA-202ENST00000375692 I3L2K1 104 aa11.14□□□□□ -0.63
CLCNKA-202ENST00000375692 BPIFA4PQ86YQ2 179 aa11.14□□□□□ -0.63
CLCNKA-202ENST00000375692 BCL6BQ8N143 479 aaPredicted RBP11.14□□□□□ -0.63
CLCNKA-202ENST00000375692 A0A096LNJ9 63 aa11.14□□□□□ -0.63
CLCNKA-202ENST00000375692 COTL1Q14019 142 aa11.14□□□□□ -0.63
CLCNKA-202ENST00000375692 PIP4P2Q8N4L2 257 aa11.14□□□□□ -0.63
CLCNKA-202ENST00000375692 IGFBPL1Q8WX77 278 aa11.14□□□□□ -0.63
CLCNKA-202ENST00000375692 C8orf49Q96NF6 230 aa11.14□□□□□ -0.63
CLCNKA-202ENST00000375692 C7orf71A4D174 169 aa11.13□□□□□ -0.63
CLCNKA-202ENST00000375692 OR10AG1Q8NH19 301 aa11.13□□□□□ -0.63
CLCNKA-202ENST00000375692 LINC01560Q8TB33 94 aa11.13□□□□□ -0.63
CLCNKA-202ENST00000375692 ANKHD1Q8IWZ3 2542 aaKnown RBP11.13□□□□□ -0.63
CLCNKA-202ENST00000375692 IGHV1-3A0A0C4DH29 117 aa11.13□□□□□ -0.63
CLCNKA-202ENST00000375692 GAGE12BA1L429 117 aa11.13□□□□□ -0.63
CLCNKA-202ENST00000375692 TMEM213A2RRL7 107 aa11.13□□□□□ -0.63
CLCNKA-202ENST00000375692 COX7A1P24310 79 aa11.13□□□□□ -0.63
CLCNKA-202ENST00000375692 CSN1S1P47710 185 aa11.13□□□□□ -0.63
CLCNKA-202ENST00000375692 SIGLEC15Q6ZMC9 328 aa11.13□□□□□ -0.63
CLCNKA-202ENST00000375692 RALYQ9UKM9 306 aaKnown RBP11.13□□□□□ -0.63
CLCNKA-202ENST00000375692 D6R8Y8 96 aa11.12□□□□□ -0.63
CLCNKA-202ENST00000375692 TMEM97Q5BJF2 176 aa11.12□□□□□ -0.63
CLCNKA-202ENST00000375692 NAA38Q9BRA0 125 aaKnown RBP11.12□□□□□ -0.63
CLCNKA-202ENST00000375692 LYNX1G3V0Z9 82 aa11.12□□□□□ -0.63
CLCNKA-202ENST00000375692 LYNX1P0DP58 116 aa11.12□□□□□ -0.63
CLCNKA-202ENST00000375692 PLGLAQ15195 96 aa11.12□□□□□ -0.63
CLCNKA-202ENST00000375692 PSG3Q16557 428 aa11.12□□□□□ -0.63
CLCNKA-202ENST00000375692 SIGLEC8Q9NYZ4 499 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms