RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 RHOGP84095 191 aa13.58□□□□□ -0.24
VARS-215ENST00000375663 PSG3Q16557 428 aa13.58□□□□□ -0.24
VARS-215ENST00000375663 Q8TAT8 98 aa13.58□□□□□ -0.24
VARS-215ENST00000375663 A0A0G2JLM5 398 aa13.58□□□□□ -0.24
VARS-215ENST00000375663 FAM106AQ4KMX7 169 aa13.58□□□□□ -0.24
VARS-215ENST00000375663 CD5LO43866 347 aa13.57□□□□□ -0.24
VARS-215ENST00000375663 IGKCP01834 107 aa13.57□□□□□ -0.24
VARS-215ENST00000375663 TDRG1Q3Y452 100 aa13.57□□□□□ -0.24
VARS-215ENST00000375663 GFRA4Q9GZZ7 299 aa13.57□□□□□ -0.24
VARS-215ENST00000375663 GATA4P43694 442 aa13.57□□□□□ -0.24
VARS-215ENST00000375663 NEU4Q8WWR8 484 aaPredicted RBP13.57□□□□□ -0.24
VARS-215ENST00000375663 ADAMTS9Q9P2N4 1935 aa13.57□□□□□ -0.24
VARS-215ENST00000375663 IGKV3-20P01619 116 aa13.57□□□□□ -0.24
VARS-215ENST00000375663 IGLV1-44P01699 117 aa13.57□□□□□ -0.24
VARS-215ENST00000375663 COX6CP09669 75 aa13.57□□□□□ -0.24
VARS-215ENST00000375663 TDGF1P13385 188 aa13.57□□□□□ -0.24
VARS-215ENST00000375663 IFI27P40305 119 aaPredicted RBP13.57□□□□□ -0.24
VARS-215ENST00000375663 GAGE1Q13065 139 aa13.57□□□□□ -0.24
VARS-215ENST00000375663 ZNF56Q15929 161 aa13.57□□□□□ -0.24
VARS-215ENST00000375663 CT83Q5H943 113 aa13.57□□□□□ -0.24
VARS-215ENST00000375663 NUP37Q8NFH4 326 aa13.57□□□□□ -0.24
VARS-215ENST00000375663 ZNF492Q9P255 531 aa13.57□□□□□ -0.24
VARS-215ENST00000375663 PPP1R17O96001 155 aa13.56□□□□□ -0.24
VARS-215ENST00000375663 POU2AF1Q16633 256 aa13.56□□□□□ -0.24
VARS-215ENST00000375663 SAMD5Q5TGI4 173 aa13.56□□□□□ -0.24
VARS-215ENST00000375663 LYPD1Q8N2G4 141 aa13.56□□□□□ -0.24
VARS-215ENST00000375663 TMEM190Q8WZ59 177 aa13.56□□□□□ -0.24
VARS-215ENST00000375663 VKORC1Q9BQB6 163 aa13.56□□□□□ -0.24
VARS-215ENST00000375663 GAGE12BA1L429 117 aa13.56□□□□□ -0.24
VARS-215ENST00000375663 FAM231BA6NCW3 169 aa13.56□□□□□ -0.24
VARS-215ENST00000375663 SH2D1AO60880 128 aa13.56□□□□□ -0.24
VARS-215ENST00000375663 ZNF672Q499Z4 452 aaPredicted RBP13.56□□□□□ -0.24
VARS-215ENST00000375663 ODF3L1Q8IXM7 274 aa13.56□□□□□ -0.24
VARS-215ENST00000375663 ZNF418Q8TF45 676 aaPredicted RBP13.56□□□□□ -0.24
VARS-215ENST00000375663 FAM168AQ92567 244 aa13.56□□□□□ -0.24
VARS-215ENST00000375663 BUB1B-PAK6H3BSN5 160 aa13.55□□□□□ -0.24
VARS-215ENST00000375663 IGLV2-14P01704 120 aa13.55□□□□□ -0.24
VARS-215ENST00000375663 BCL6BQ8N143 479 aaPredicted RBP13.55□□□□□ -0.24
VARS-215ENST00000375663 RNF5Q99942 180 aa13.55□□□□□ -0.24
VARS-215ENST00000375663 EML6Q6ZMW3 1958 aa13.55□□□□□ -0.24
VARS-215ENST00000375663 SFTA2Q6UW10 78 aa13.55□□□□□ -0.24
VARS-215ENST00000375663 SRSF1Q07955 248 aaKnown RBP eCLIP13.55□□□□□ -0.24
VARS-215ENST00000375663 CLEC2AQ6UVW9 174 aa13.55□□□□□ -0.24
VARS-215ENST00000375663 ZNF833PQ6ZTB9 187 aa13.55□□□□□ -0.24
VARS-215ENST00000375663 LAMA3Q16787 3333 aa13.55□□□□□ -0.24
VARS-215ENST00000375663 MKI67P46013 3256 aaKnown RBP13.55□□□□□ -0.24
VARS-215ENST00000375663 GTSCR1Q86UQ5 136 aa13.55□□□□□ -0.24
VARS-215ENST00000375663 SMKR1H3BMG3 65 aa13.54□□□□□ -0.24
VARS-215ENST00000375663 ANKHD1Q8IWZ3 2542 aaKnown RBP13.54□□□□□ -0.24
VARS-215ENST00000375663 NPIPB6E9PJ23 425 aa13.54□□□□□ -0.24
VARS-215ENST00000375663 ZNF479Q96JC4 524 aa13.54□□□□□ -0.24
VARS-215ENST00000375663 SHANK2-AS3Q9BTD1 123 aa13.54□□□□□ -0.24
VARS-215ENST00000375663 A0A0G2JNJ9 132 aa13.53□□□□□ -0.24
VARS-215ENST00000375663 MAJINQ3KP22 176 aa13.53□□□□□ -0.24
VARS-215ENST00000375663 Q9UFV3 132 aa13.53□□□□□ -0.24
VARS-215ENST00000375663 C5orf64Q2M2E5 130 aa13.53□□□□□ -0.24
VARS-215ENST00000375663 IGFL4Q6B9Z1 124 aa13.53□□□□□ -0.24
VARS-215ENST00000375663 IGF2RP11717 2491 aa13.53□□□□□ -0.24
VARS-215ENST00000375663 KIR3DS1Q14943 382 aa13.53□□□□□ -0.24
VARS-215ENST00000375663 Q6ZS92 163 aa13.53□□□□□ -0.24
VARS-215ENST00000375663 BEX4Q9NWD9 120 aaPredicted RBP13.53□□□□□ -0.24
VARS-215ENST00000375663 KLRD1Q13241 179 aa13.53□□□□□ -0.24
VARS-215ENST00000375663 SAMD13Q5VXD3 122 aa13.53□□□□□ -0.24
VARS-215ENST00000375663 FXYD5Q96DB9 178 aa13.53□□□□□ -0.24
VARS-215ENST00000375663 C2CD3Q4AC94 2353 aa13.52□□□□□ -0.24
VARS-215ENST00000375663 TMEM131Q92545 1883 aa13.52□□□□□ -0.24
VARS-215ENST00000375663 IGHV1-24A0A0C4DH33 117 aa13.52□□□□□ -0.24
VARS-215ENST00000375663 A0A1B0GV72 72 aa13.52□□□□□ -0.24
VARS-215ENST00000375663 C15orf32Q32M92 178 aa13.52□□□□□ -0.24
VARS-215ENST00000375663 IGHV3-11P01762 117 aa13.52□□□□□ -0.25
VARS-215ENST00000375663 CNTFRP26992 372 aa13.52□□□□□ -0.25
VARS-215ENST00000375663 PLA2G5P39877 138 aa13.52□□□□□ -0.25
VARS-215ENST00000375663 TPSG1Q9NRR2 321 aa13.52□□□□□ -0.25
VARS-215ENST00000375663 SMPXQ9UHP9 88 aa13.52□□□□□ -0.25
VARS-215ENST00000375663 TMEM155Q4W5P6 130 aa13.52□□□□□ -0.25
VARS-215ENST00000375663 GLMPQ8WWB7 406 aa13.51□□□□□ -0.25
VARS-215ENST00000375663 TMEM213A2RRL7 107 aa13.51□□□□□ -0.25
VARS-215ENST00000375663 RNASE4P34096 147 aaKnown RBP13.51□□□□□ -0.25
VARS-215ENST00000375663 ZC2HC1BQ5TFG8 222 aa13.51□□□□□ -0.25
VARS-215ENST00000375663 IGLV3-9A0A075B6K5 115 aa13.51□□□□□ -0.25
VARS-215ENST00000375663 Q8TCH9 128 aa13.51□□□□□ -0.25
VARS-215ENST00000375663 KMT2EQ8IZD2 1858 aa13.51□□□□□ -0.25
VARS-215ENST00000375663 CEACAM4O75871 244 aa13.5□□□□□ -0.25
VARS-215ENST00000375663 PAPPA-AS1Q5QFB9 102 aa13.5□□□□□ -0.25
VARS-215ENST00000375663 ZNF295-AS1Q8N0V1 137 aa13.5□□□□□ -0.25
VARS-215ENST00000375663 JMJD8Q96S16 334 aa13.5□□□□□ -0.25
VARS-215ENST00000375663 DIAPH2-AS1Q14236 149 aa13.5□□□□□ -0.25
VARS-215ENST00000375663 ORMDL2Q53FV1 153 aa13.5□□□□□ -0.25
VARS-215ENST00000375663 DYNLRB2Q8TF09 96 aa13.5□□□□□ -0.25
VARS-215ENST00000375663 LINC01559Q495D7 138 aa13.5□□□□□ -0.25
VARS-215ENST00000375663 CST9LQ9H4G1 147 aa13.5□□□□□ -0.25
VARS-215ENST00000375663 SMAD7O15105 426 aaKnown RBP13.49□□□□□ -0.25
VARS-215ENST00000375663 TRAV21A0A0B4J279 112 aa13.49□□□□□ -0.25
VARS-215ENST00000375663 TGFAP01135 160 aa13.49□□□□□ -0.25
VARS-215ENST00000375663 LAGE3Q14657 143 aa13.49□□□□□ -0.25
VARS-215ENST00000375663 Q6ZVH6 145 aa13.49□□□□□ -0.25
VARS-215ENST00000375663 ZNF256Q9Y2P7 627 aaPredicted RBP13.49□□□□□ -0.25
VARS-215ENST00000375663 TRBV19A0A075B6N1 114 aa13.49□□□□□ -0.25
VARS-215ENST00000375663 SNRPD3P62318 126 aaKnown RBP13.49□□□□□ -0.25
VARS-215ENST00000375663 SSBP2P81877 361 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms