RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 ODF3L2Q3SX64 289 aa8.91□□□□□ -0.98
LSM2-208ENST00000375661 LGALSLQ3ZCW2 172 aaPredicted RBP8.91□□□□□ -0.98
LSM2-208ENST00000375661 SPATA31B1PQ5VZV4 182 aa8.91□□□□□ -0.98
LSM2-208ENST00000375661 STXBP6Q8NFX7 210 aa8.91□□□□□ -0.98
LSM2-208ENST00000375661 PFDN5Q99471 154 aa8.91□□□□□ -0.98
LSM2-208ENST00000375661 KCNIP2Q9NS61 270 aa8.91□□□□□ -0.98
LSM2-208ENST00000375661 BORCS7-ASMTA0A0B4J1R7 106 aa8.9□□□□□ -0.98
LSM2-208ENST00000375661 DNASE2O00115 360 aaPredicted RBP8.9□□□□□ -0.98
LSM2-208ENST00000375661 CMC4P56277 68 aaPredicted RBP8.9□□□□□ -0.98
LSM2-208ENST00000375661 FFAR4Q5NUL3 377 aa8.9□□□□□ -0.98
LSM2-208ENST00000375661 FAM78BQ5VT40 261 aa8.9□□□□□ -0.98
LSM2-208ENST00000375661 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.9□□□□□ -0.98
LSM2-208ENST00000375661 TMUB2Q71RG4 321 aa8.9□□□□□ -0.98
LSM2-208ENST00000375661 S100A7AQ86SG5 101 aa8.9□□□□□ -0.98
LSM2-208ENST00000375661 ARPC5LQ9BPX5 153 aa8.9□□□□□ -0.98
LSM2-208ENST00000375661 PSMG3Q9BT73 122 aaPredicted RBP8.9□□□□□ -0.98
LSM2-208ENST00000375661 SH3BGRL3Q9H299 93 aa8.9□□□□□ -0.98
LSM2-208ENST00000375661 C11orf68Q9H3H3 251 aaKnown RBP8.9□□□□□ -0.98
LSM2-208ENST00000375661 SEPSECSQ9HD40 501 aaKnown RBP8.9□□□□□ -0.98
LSM2-208ENST00000375661 NRN1Q9NPD7 142 aa8.9□□□□□ -0.98
LSM2-208ENST00000375661 UBQLN2Q9UHD9 624 aa8.9□□□□□ -0.98
LSM2-208ENST00000375661 HECTD4Q9Y4D8 3996 aa8.9□□□□□ -0.99
LSM2-208ENST00000375661 SOCS3O14543 225 aa8.89□□□□□ -0.99
LSM2-208ENST00000375661 BCL2L11O43521 198 aa8.89□□□□□ -0.99
LSM2-208ENST00000375661 RPL7P18124 248 aaKnown RBP8.89□□□□□ -0.99
LSM2-208ENST00000375661 GALR1P47211 349 aa8.89□□□□□ -0.99
LSM2-208ENST00000375661 MIR17HGQ75NE6 70 aa8.89□□□□□ -0.99
LSM2-208ENST00000375661 OR2G3Q8NGZ4 309 aa8.89□□□□□ -0.99
LSM2-208ENST00000375661 C11orf45Q8TAV5 145 aa8.89□□□□□ -0.99
LSM2-208ENST00000375661 HYLS1Q96M11 299 aa8.89□□□□□ -0.99
LSM2-208ENST00000375661 GPR82Q96P67 336 aa8.89□□□□□ -0.99
LSM2-208ENST00000375661 RPL35AP18077 110 aaKnown RBP8.88□□□□□ -0.99
LSM2-208ENST00000375661 RAB2AP61019 212 aa8.88□□□□□ -0.99
LSM2-208ENST00000375661 BPIFA4PQ86YQ2 179 aa8.88□□□□□ -0.99
LSM2-208ENST00000375661 C2CD4CQ8TF44 421 aa8.88□□□□□ -0.99
LSM2-208ENST00000375661 FAM167A-AS1Q96KT0 104 aa8.88□□□□□ -0.99
LSM2-208ENST00000375661 FUT9Q9Y231 359 aa8.88□□□□□ -0.99
LSM2-208ENST00000375661 A0A087X0K7 114 aa8.87□□□□□ -0.99
LSM2-208ENST00000375661 KANTRA0A1W2PQU2 76 aa8.87□□□□□ -0.99
LSM2-208ENST00000375661 EIF3GO75821 320 aaKnown RBP eCLIP8.87□□□□□ -0.99
LSM2-208ENST00000375661 SNRPCP09234 159 aaKnown RBP8.87□□□□□ -0.99
LSM2-208ENST00000375661 M6PRP20645 277 aa8.87□□□□□ -0.99
LSM2-208ENST00000375661 DEFB131AP59861 70 aa8.87□□□□□ -0.99
LSM2-208ENST00000375661 SERF2P84101 59 aa8.87□□□□□ -0.99
LSM2-208ENST00000375661 ZNF124Q15973 351 aa8.87□□□□□ -0.99
LSM2-208ENST00000375661 ACOT6Q3I5F7 207 aaPredicted RBP8.87□□□□□ -0.99
LSM2-208ENST00000375661 ZFP69Q49AA0 526 aa8.87□□□□□ -0.99
LSM2-208ENST00000375661 LINC00336Q6ZUF6 198 aa8.87□□□□□ -0.99
LSM2-208ENST00000375661 APRG1Q8IVJ8 170 aa8.87□□□□□ -0.99
LSM2-208ENST00000375661 C9orf62Q8N4C0 152 aa8.87□□□□□ -0.99
LSM2-208ENST00000375661 GNPNAT1Q96EK6 184 aaPredicted RBP8.87□□□□□ -0.99
LSM2-208ENST00000375661 RARRES2Q99969 163 aa8.87□□□□□ -0.99
LSM2-208ENST00000375661 SLC25A2Q9BXI2 301 aa8.87□□□□□ -0.99
LSM2-208ENST00000375661 MRPL32Q9BYC8 188 aaKnown RBP8.87□□□□□ -0.99
LSM2-208ENST00000375661 CSTL1Q9H114 145 aa8.87□□□□□ -0.99
LSM2-208ENST00000375661 PLA2G2EQ9NZK7 142 aa8.87□□□□□ -0.99
LSM2-208ENST00000375661 RNF24Q9Y225 148 aa8.87□□□□□ -0.99
LSM2-208ENST00000375661 PCLOQ9Y6V0 5065 aa8.87□□□□□ -0.99
LSM2-208ENST00000375661 DNAH10Q8IVF4 4471 aa8.86□□□□□ -0.99
LSM2-208ENST00000375661 TRAV8-2A0A0B4J237 113 aa8.86□□□□□ -0.99
LSM2-208ENST00000375661 H3BQ15 152 aa8.86□□□□□ -0.99
LSM2-208ENST00000375661 ZNF688P0C7X2 276 aa8.86□□□□□ -0.99
LSM2-208ENST00000375661 IGLC2P0DOY2 106 aa8.86□□□□□ -0.99
LSM2-208ENST00000375661 SPP1P10451 314 aa8.86□□□□□ -0.99
LSM2-208ENST00000375661 NANOS2P60321 138 aaKnown RBP8.86□□□□□ -0.99
LSM2-208ENST00000375661 RHOBP62745 196 aa8.86□□□□□ -0.99
LSM2-208ENST00000375661 OR10G4Q8NGN3 311 aa8.86□□□□□ -0.99
LSM2-208ENST00000375661 OR10G9Q8NGN4 311 aa8.86□□□□□ -0.99
LSM2-208ENST00000375661 OR10G7Q8NGN6 311 aa8.86□□□□□ -0.99
LSM2-208ENST00000375661 ZNF503Q96F45 646 aa8.86□□□□□ -0.99
LSM2-208ENST00000375661 ZNF471Q9BX82 626 aaPredicted RBP8.86□□□□□ -0.99
LSM2-208ENST00000375661 TMEM14CQ9P0S9 112 aa8.86□□□□□ -0.99
LSM2-208ENST00000375661 C11orf94C9JXX5 98 aa8.85□□□□□ -0.99
LSM2-208ENST00000375661 H3BTX0 84 aa8.85□□□□□ -0.99
LSM2-208ENST00000375661 PFDN1O60925 122 aa8.85□□□□□ -0.99
LSM2-208ENST00000375661 PYYP10082 97 aa8.85□□□□□ -0.99
LSM2-208ENST00000375661 MEOX2P50222 304 aa8.85□□□□□ -0.99
LSM2-208ENST00000375661 PSMG4Q5JS54 123 aa8.85□□□□□ -0.99
LSM2-208ENST00000375661 IGFL4Q6B9Z1 124 aa8.85□□□□□ -0.99
LSM2-208ENST00000375661 FAM122CQ6P4D5 195 aa8.85□□□□□ -0.99
LSM2-208ENST00000375661 C16orf92Q96LL3 132 aa8.85□□□□□ -0.99
LSM2-208ENST00000375661 C20orf173Q96LM9 149 aa8.85□□□□□ -0.99
LSM2-208ENST00000375661 RPRMQ9NS64 109 aa8.85□□□□□ -0.99
LSM2-208ENST00000375661 ZNF586Q9NXT0 402 aa8.85□□□□□ -0.99
LSM2-208ENST00000375661 ISLRO14498 428 aa8.84□□□□□ -0.99
LSM2-208ENST00000375661 MBP02144 154 aa8.84□□□□□ -0.99
LSM2-208ENST00000375661 HIST1H1EP10412 219 aaKnown RBP8.84□□□□□ -0.99
LSM2-208ENST00000375661 PSMB3P49720 205 aa8.84□□□□□ -0.99
LSM2-208ENST00000375661 NKX2-5P52952 324 aaPredicted RBP8.84□□□□□ -0.99
LSM2-208ENST00000375661 DEFB1P60022 68 aa8.84□□□□□ -0.99
LSM2-208ENST00000375661 TMEM41BQ5BJD5 291 aa8.84□□□□□ -0.99
LSM2-208ENST00000375661 SAMD13Q5VXD3 122 aa8.84□□□□□ -0.99
LSM2-208ENST00000375661 BAP18Q8IXM2 172 aa8.84□□□□□ -0.99
LSM2-208ENST00000375661 OR11H2Q8NH07 326 aa8.84□□□□□ -0.99
LSM2-208ENST00000375661 STOML3Q8TAV4 291 aa8.84□□□□□ -0.99
LSM2-208ENST00000375661 SAT2Q96F10 170 aaPredicted RBP8.84□□□□□ -0.99
LSM2-208ENST00000375661 OR51M1Q9H341 326 aa8.84□□□□□ -0.99
LSM2-208ENST00000375661 HRH4Q9H3N8 390 aa8.84□□□□□ -0.99
LSM2-208ENST00000375661 APLNQ9ULZ1 77 aa8.84□□□□□ -0.99
LSM2-208ENST00000375661 DNAH6Q9C0G6 4158 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 249.8 ms