RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 Q86TA4 180 aa13.94□□□□□ -0.18
HLA-DQB1-201ENST00000374943 ARL6IP6Q8N6S5 226 aa13.94□□□□□ -0.18
HLA-DQB1-201ENST00000374943 TMEM75Q8N9X5 138 aa13.94□□□□□ -0.18
HLA-DQB1-201ENST00000374943 OR5R1Q8NH85 324 aa13.94□□□□□ -0.18
HLA-DQB1-201ENST00000374943 LINC00527Q9UJ94 153 aa13.94□□□□□ -0.18
HLA-DQB1-201ENST00000374943 SMIM27A0A1W2PRY6 76 aa13.93□□□□□ -0.18
HLA-DQB1-201ENST00000374943 IGLV2-11P01706 119 aa13.93□□□□□ -0.18
HLA-DQB1-201ENST00000374943 IER3P46695 156 aa13.93□□□□□ -0.18
HLA-DQB1-201ENST00000374943 NDUFA6P56556 154 aa13.93□□□□□ -0.18
HLA-DQB1-201ENST00000374943 BLCAPP62952 87 aa13.93□□□□□ -0.18
HLA-DQB1-201ENST00000374943 PSG9Q00887 426 aa13.93□□□□□ -0.18
HLA-DQB1-201ENST00000374943 USMG5Q96IX5 58 aa13.93□□□□□ -0.18
HLA-DQB1-201ENST00000374943 Q96MF0 132 aa13.93□□□□□ -0.18
HLA-DQB1-201ENST00000374943 ZNF492Q9P255 531 aa13.93□□□□□ -0.18
HLA-DQB1-201ENST00000374943 IGHV4-59P01825 116 aa13.92□□□□□ -0.18
HLA-DQB1-201ENST00000374943 AKR1D1P51857 326 aa13.92□□□□□ -0.18
HLA-DQB1-201ENST00000374943 CFHR3Q02985 330 aa13.92□□□□□ -0.18
HLA-DQB1-201ENST00000374943 OR8I2Q8N0Y5 310 aa13.92□□□□□ -0.18
HLA-DQB1-201ENST00000374943 GNB4Q9HAV0 340 aa13.92□□□□□ -0.18
HLA-DQB1-201ENST00000374943 CLPSL1A2RUU4 121 aa13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 ZNF705GA8MUZ8 300 aaPredicted RBP13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 IGLV1-40P01703 118 aa13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 TPPP2P59282 170 aa13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 GOLT1AQ6ZVE7 132 aa13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 NUDT10Q8NFP7 164 aa13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 NUDT11Q96G61 164 aa13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 AAMDCQ9H7C9 122 aa13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 ZANQ9Y493 2812 aa13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 A0A087X0K7 114 aa13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 SERTM2A0A1B0GWG4 89 aa13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 K7EQM0 130 aa13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 BUB3O43684 328 aa13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 GATCO43716 136 aaKnown RBP13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 RPL19P84098 196 aaKnown RBP13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 C1orf194Q5T5A4 169 aa13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 TMEM183AQ8IXX5 376 aa13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 GRAMD2BQ96HH9 432 aa13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 NOL4LQ96MY1 436 aaPredicted RBP13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 SMAD5-AS1Q9Y6J3 95 aa13.91□□□□□ -0.18
HLA-DQB1-201ENST00000374943 IGHV3-35A0A0C4DH35 117 aa13.9□□□□□ -0.18
HLA-DQB1-201ENST00000374943 DIRC3C9JPN6 131 aa13.9□□□□□ -0.18
HLA-DQB1-201ENST00000374943 S100A8P05109 93 aa13.9□□□□□ -0.18
HLA-DQB1-201ENST00000374943 CDX1P47902 265 aaPredicted RBP13.9□□□□□ -0.18
HLA-DQB1-201ENST00000374943 Q6ZS46 218 aa13.9□□□□□ -0.18
HLA-DQB1-201ENST00000374943 LINC00518Q8N0U6 118 aa13.9□□□□□ -0.18
HLA-DQB1-201ENST00000374943 SGK494Q96LW2 274 aa13.9□□□□□ -0.18
HLA-DQB1-201ENST00000374943 TRAPPC1Q9Y5R8 145 aa13.9□□□□□ -0.18
HLA-DQB1-201ENST00000374943 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.89□□□□□ -0.19
HLA-DQB1-201ENST00000374943 C19orf71A6NCJ1 209 aa13.89□□□□□ -0.19
HLA-DQB1-201ENST00000374943 CYB5R2Q6BCY4 276 aa13.89□□□□□ -0.19
HLA-DQB1-201ENST00000374943 SERTAD4Q9NUC0 356 aa13.89□□□□□ -0.19
HLA-DQB1-201ENST00000374943 U3KQE9 123 aa13.89□□□□□ -0.19
HLA-DQB1-201ENST00000374943 ARL3P36405 182 aa13.88□□□□□ -0.19
HLA-DQB1-201ENST00000374943 PSG3Q16557 428 aa13.88□□□□□ -0.19
HLA-DQB1-201ENST00000374943 COX19Q49B96 90 aa13.88□□□□□ -0.19
HLA-DQB1-201ENST00000374943 CT83Q5H943 113 aa13.88□□□□□ -0.19
HLA-DQB1-201ENST00000374943 COA6Q5JTJ3 125 aaKnown RBP13.88□□□□□ -0.19
HLA-DQB1-201ENST00000374943 Q6YL49 198 aa13.88□□□□□ -0.19
HLA-DQB1-201ENST00000374943 METTL26Q96S19 204 aa13.88□□□□□ -0.19
HLA-DQB1-201ENST00000374943 PRSS22Q9GZN4 317 aa13.88□□□□□ -0.19
HLA-DQB1-201ENST00000374943 PRDM13Q9H4Q3 707 aa13.88□□□□□ -0.19
HLA-DQB1-201ENST00000374943 ZFP30Q9Y2G7 519 aa13.88□□□□□ -0.19
HLA-DQB1-201ENST00000374943 ITPR2Q14571 2701 aa13.88□□□□□ -0.19
HLA-DQB1-201ENST00000374943 TRAV8-1A0A0A6YYK1 113 aa13.88□□□□□ -0.19
HLA-DQB1-201ENST00000374943 PRR27Q6MZM9 219 aa13.88□□□□□ -0.19
HLA-DQB1-201ENST00000374943 VPREB3Q9UKI3 123 aa13.88□□□□□ -0.19
HLA-DQB1-201ENST00000374943 IGHV3OR16-8A0A075B7F1 116 aa13.87□□□□□ -0.19
HLA-DQB1-201ENST00000374943 A0A0G2JLM5 398 aa13.87□□□□□ -0.19
HLA-DQB1-201ENST00000374943 IZUMO1RA6ND01 250 aa13.87□□□□□ -0.19
HLA-DQB1-201ENST00000374943 M0R3E3 92 aa13.87□□□□□ -0.19
HLA-DQB1-201ENST00000374943 CSN1S1P47710 185 aa13.87□□□□□ -0.19
HLA-DQB1-201ENST00000374943 PRNTQ86SH4 94 aa13.87□□□□□ -0.19
HLA-DQB1-201ENST00000374943 TSKUQ8WUA8 353 aa13.87□□□□□ -0.19
HLA-DQB1-201ENST00000374943 TMEM89A2RUT3 159 aa13.86□□□□□ -0.19
HLA-DQB1-201ENST00000374943 FBLL1A6NHQ2 334 aaKnown RBP13.86□□□□□ -0.19
HLA-DQB1-201ENST00000374943 NDUFA4O00483 81 aa13.86□□□□□ -0.19
HLA-DQB1-201ENST00000374943 PF4V1P10720 104 aa13.86□□□□□ -0.19
HLA-DQB1-201ENST00000374943 WDR73Q6P4I2 378 aa13.86□□□□□ -0.19
HLA-DQB1-201ENST00000374943 HIST3H2BBQ8N257 126 aa13.86□□□□□ -0.19
HLA-DQB1-201ENST00000374943 GNB1LQ9BYB4 327 aa13.86□□□□□ -0.19
HLA-DQB1-201ENST00000374943 RPP21Q9H633 154 aaKnown RBP13.86□□□□□ -0.19
HLA-DQB1-201ENST00000374943 ZNF331Q9NQX6 463 aaPredicted RBP13.86□□□□□ -0.19
HLA-DQB1-201ENST00000374943 PSG8Q9UQ74 426 aa13.86□□□□□ -0.19
HLA-DQB1-201ENST00000374943 NPIPB6E9PJ23 425 aa13.85□□□□□ -0.19
HLA-DQB1-201ENST00000374943 MT-ND6P03923 174 aa13.85□□□□□ -0.19
HLA-DQB1-201ENST00000374943 MEOX2P50222 304 aa13.85□□□□□ -0.19
HLA-DQB1-201ENST00000374943 LINC00322Q6ZN03 302 aaPredicted RBP13.85□□□□□ -0.19
HLA-DQB1-201ENST00000374943 KLK15Q9H2R5 256 aa13.85□□□□□ -0.19
HLA-DQB1-201ENST00000374943 IFITM10A6NMD0 228 aa13.85□□□□□ -0.19
HLA-DQB1-201ENST00000374943 CA1P00915 261 aaPredicted RBP13.85□□□□□ -0.19
HLA-DQB1-201ENST00000374943 IGHG4P01861 327 aa13.85□□□□□ -0.19
HLA-DQB1-201ENST00000374943 CBLN1P23435 193 aa13.85□□□□□ -0.19
HLA-DQB1-201ENST00000374943 TCL1AP56279 114 aa13.85□□□□□ -0.19
HLA-DQB1-201ENST00000374943 RASL11AQ6T310 242 aa13.85□□□□□ -0.19
HLA-DQB1-201ENST00000374943 OR4B1Q8NGF8 309 aa13.85□□□□□ -0.19
HLA-DQB1-201ENST00000374943 NAT8BQ9UHF3 227 aa13.85□□□□□ -0.19
HLA-DQB1-201ENST00000374943 TEP1Q99973 2627 aaKnown RBP13.84□□□□□ -0.19
HLA-DQB1-201ENST00000374943 P01737 135 aa13.84□□□□□ -0.19
HLA-DQB1-201ENST00000374943 FAM209BQ5JX69 171 aa13.84□□□□□ -0.19
HLA-DQB1-201ENST00000374943 C16orf54Q6UWD8 224 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms