RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 FOXC2Q99958 501 aa13.02□□□□□ -0.32
PTPN20-203ENST00000374342 IL36BQ9NZH7 164 aa13.02□□□□□ -0.32
PTPN20-203ENST00000374342 FLNAP21333 2647 aaKnown RBP13.02□□□□□ -0.33
PTPN20-203ENST00000374342 IGHV3-49A0A0A0MS15 119 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 A0A0G2JLM5 398 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 M0R3E3 92 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 BUB3O43684 328 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 RPEL1Q2QD12 228 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 OR4X2Q8NGF9 303 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 DUX5Q96PT3 197 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 PRSS22Q9GZN4 317 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 NPFFR1Q9GZQ6 430 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 BIN3Q9NQY0 253 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 SMAD5-AS1Q9Y6J3 95 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 LTAP01374 205 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 APOHP02749 345 aaPredicted RBP13.01□□□□□ -0.33
PTPN20-203ENST00000374342 PSG9Q00887 426 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 FOXL1Q12952 345 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 GPR82Q96P67 336 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 PRDM13Q9H4Q3 707 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 SRD5A3Q9H8P0 318 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 ZNF702PQ9H963 129 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 SERTAD4Q9NUC0 356 aa13.01□□□□□ -0.33
PTPN20-203ENST00000374342 CCDC168Q8NDH2 2452 aa13□□□□□ -0.33
PTPN20-203ENST00000374342 IGHG4P01861 327 aa13□□□□□ -0.33
PTPN20-203ENST00000374342 S100A6P06703 90 aa13□□□□□ -0.33
PTPN20-203ENST00000374342 C10orf99Q6UWK7 81 aa13□□□□□ -0.33
PTPN20-203ENST00000374342 MXRA5Q9NR99 2828 aa13□□□□□ -0.33
PTPN20-203ENST00000374342 ZNF320A2RRD8 509 aa13□□□□□ -0.33
PTPN20-203ENST00000374342 ZNF705GA8MUZ8 300 aaPredicted RBP13□□□□□ -0.33
PTPN20-203ENST00000374342 PRNTQ86SH4 94 aa13□□□□□ -0.33
PTPN20-203ENST00000374342 TEX29Q8N6K0 151 aa13□□□□□ -0.33
PTPN20-203ENST00000374342 SMIM12Q96EX1 92 aa13□□□□□ -0.33
PTPN20-203ENST00000374342 UNC79Q9P2D8 2635 aa12.99□□□□□ -0.33
PTPN20-203ENST00000374342 ZNF785A8K8V0 405 aa12.99□□□□□ -0.33
PTPN20-203ENST00000374342 DIRC3C9JPN6 131 aa12.99□□□□□ -0.33
PTPN20-203ENST00000374342 K7EQM0 130 aa12.99□□□□□ -0.33
PTPN20-203ENST00000374342 NDUFA4O00483 81 aa12.99□□□□□ -0.33
PTPN20-203ENST00000374342 IGLV2-11P01706 119 aa12.99□□□□□ -0.33
PTPN20-203ENST00000374342 PSMB8P28062 276 aa12.99□□□□□ -0.33
PTPN20-203ENST00000374342 UNQ9165/PRO28630Q6UXU0 137 aa12.99□□□□□ -0.33
PTPN20-203ENST00000374342 TMEM75Q8N9X5 138 aa12.99□□□□□ -0.33
PTPN20-203ENST00000374342 TYMSP04818 313 aa12.98□□□□□ -0.33
PTPN20-203ENST00000374342 SNRPEP62304 92 aaKnown RBP12.98□□□□□ -0.33
PTPN20-203ENST00000374342 BTF3L4Q96K17 158 aa12.98□□□□□ -0.33
PTPN20-203ENST00000374342 A0A087X0K7 114 aa12.98□□□□□ -0.33
PTPN20-203ENST00000374342 ZNF253O75346 499 aa12.98□□□□□ -0.33
PTPN20-203ENST00000374342 CSN1S1P47710 185 aa12.98□□□□□ -0.33
PTPN20-203ENST00000374342 TCL1AP56279 114 aa12.98□□□□□ -0.33
PTPN20-203ENST00000374342 KRTAP1-1Q07627 177 aa12.98□□□□□ -0.33
PTPN20-203ENST00000374342 C1orf194Q5T5A4 169 aa12.98□□□□□ -0.33
PTPN20-203ENST00000374342 IGFL4Q6B9Z1 124 aa12.98□□□□□ -0.33
PTPN20-203ENST00000374342 FAM231DQ6ZW35 169 aa12.98□□□□□ -0.33
PTPN20-203ENST00000374342 Q71RC1 249 aaPredicted RBP12.98□□□□□ -0.33
PTPN20-203ENST00000374342 FRZBQ92765 325 aa12.98□□□□□ -0.33
PTPN20-203ENST00000374342 ITPR2Q14571 2701 aa12.97□□□□□ -0.33
PTPN20-203ENST00000374342 ZNF469Q96JG9 3925 aaPredicted RBP12.97□□□□□ -0.33
PTPN20-203ENST00000374342 GATCO43716 136 aaKnown RBP12.97□□□□□ -0.33
PTPN20-203ENST00000374342 CA1P00915 261 aaPredicted RBP12.97□□□□□ -0.33
PTPN20-203ENST00000374342 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.97□□□□□ -0.33
PTPN20-203ENST00000374342 ASCL2Q99929 193 aa12.97□□□□□ -0.33
PTPN20-203ENST00000374342 MLST8Q9BVC4 326 aa12.97□□□□□ -0.33
PTPN20-203ENST00000374342 U3KQE9 123 aa12.97□□□□□ -0.33
PTPN20-203ENST00000374342 TRAV9-1A0A075B6T8 112 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 HIST1H2BKO60814 126 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 HIST1H2BJP06899 126 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 HIST1H2BOP23527 126 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 HLA-DMBP28068 263 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 HIST1H2BBP33778 126 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 HIST1H2BDP58876 126 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 HIST1H2BCP62807 126 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 SLC35B1P78383 322 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 PSG3Q16557 428 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 HIST2H2BEQ16778 126 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 FAM209BQ5JX69 171 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.96□□□□□ -0.33
PTPN20-203ENST00000374342 NUDT10Q8NFP7 164 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 HIST1H2BHQ93079 126 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 NUDT11Q96G61 164 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 HIST1H2BNQ99877 126 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 HIST1H2BMQ99879 126 aa12.96□□□□□ -0.33
PTPN20-203ENST00000374342 ZNF331Q9NQX6 463 aaPredicted RBP12.96□□□□□ -0.33
PTPN20-203ENST00000374342 TLN2Q9Y4G6 2542 aa12.96□□□□□ -0.34
PTPN20-203ENST00000374342 TRBV6-1A0A0K0K1D8 114 aa12.96□□□□□ -0.34
PTPN20-203ENST00000374342 TMEM89A2RUT3 159 aa12.96□□□□□ -0.34
PTPN20-203ENST00000374342 CD5LO43866 347 aa12.96□□□□□ -0.34
PTPN20-203ENST00000374342 TMEM183AQ8IXX5 376 aa12.96□□□□□ -0.34
PTPN20-203ENST00000374342 YAE1D1Q9NRH1 226 aa12.96□□□□□ -0.34
PTPN20-203ENST00000374342 PSG8Q9UQ74 426 aa12.96□□□□□ -0.34
PTPN20-203ENST00000374342 IGKV2-40A0A087WW87 121 aaPredicted RBP12.95□□□□□ -0.34
PTPN20-203ENST00000374342 PHOX2AO14813 284 aa12.95□□□□□ -0.34
PTPN20-203ENST00000374342 IGKV2D-40P01614 121 aaPredicted RBP12.95□□□□□ -0.34
PTPN20-203ENST00000374342 RPLP1P05386 114 aaKnown RBP12.95□□□□□ -0.34
PTPN20-203ENST00000374342 TRGC1P0CF51 173 aa12.95□□□□□ -0.34
PTPN20-203ENST00000374342 ACTL10Q5JWF8 245 aa12.95□□□□□ -0.34
PTPN20-203ENST00000374342 PEF1Q9UBV8 284 aaKnown RBP12.95□□□□□ -0.34
PTPN20-203ENST00000374342 C5orf52A6NGY3 159 aa12.94□□□□□ -0.34
PTPN20-203ENST00000374342 CHEK1O14757 476 aa12.94□□□□□ -0.34
PTPN20-203ENST00000374342 C16orf54Q6UWD8 224 aa12.94□□□□□ -0.34
PTPN20-203ENST00000374342 SLC50A1Q9BRV3 221 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms