RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 DEFB1P60022 68 aa13.82□□□□□ -0.2
TRAPPC3-204ENST00000373166 BAXQ07812 192 aa13.82□□□□□ -0.2
TRAPPC3-204ENST00000373166 FGL1Q08830 312 aa13.82□□□□□ -0.2
TRAPPC3-204ENST00000373166 VWC2Q2TAL6 325 aa13.82□□□□□ -0.2
TRAPPC3-204ENST00000373166 LRRC37A5PQ49AS3 106 aa13.82□□□□□ -0.2
TRAPPC3-204ENST00000373166 GDF5OSQ5U4N7 250 aa13.82□□□□□ -0.2
TRAPPC3-204ENST00000373166 POM121L12Q8N7R1 296 aa13.82□□□□□ -0.2
TRAPPC3-204ENST00000373166 E5RGE8 158 aa13.81□□□□□ -0.2
TRAPPC3-204ENST00000373166 IGKV3-20P01619 116 aa13.81□□□□□ -0.2
TRAPPC3-204ENST00000373166 ATP6V1FQ16864 119 aa13.81□□□□□ -0.2
TRAPPC3-204ENST00000373166 PATE2Q6UY27 113 aa13.81□□□□□ -0.2
TRAPPC3-204ENST00000373166 LINC00305Q7Z4B0 112 aa13.81□□□□□ -0.2
TRAPPC3-204ENST00000373166 OR4B1Q8NGF8 309 aa13.81□□□□□ -0.2
TRAPPC3-204ENST00000373166 XCL2Q9UBD3 114 aa13.81□□□□□ -0.2
TRAPPC3-204ENST00000373166 ELOA3CA0A087WX78 387 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC3-204ENST00000373166 ZNF705EA8MWA4 302 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC3-204ENST00000373166 RTL8CO15255 209 aa13.8□□□□□ -0.2
TRAPPC3-204ENST00000373166 C10orf113Q5VZT2 155 aa13.8□□□□□ -0.2
TRAPPC3-204ENST00000373166 Q6ZRG5 221 aa13.8□□□□□ -0.2
TRAPPC3-204ENST00000373166 C20orf173Q96LM9 149 aa13.8□□□□□ -0.2
TRAPPC3-204ENST00000373166 C17orf77Q96MU5 243 aa13.8□□□□□ -0.2
TRAPPC3-204ENST00000373166 CLUHP3Q96NS8 147 aa13.8□□□□□ -0.2
TRAPPC3-204ENST00000373166 SLC25A31Q9H0C2 315 aa13.8□□□□□ -0.2
TRAPPC3-204ENST00000373166 A0A087X0K7 114 aa13.79□□□□□ -0.2
TRAPPC3-204ENST00000373166 A0A0J9YX75 114 aa13.79□□□□□ -0.2
TRAPPC3-204ENST00000373166 F6UB75 175 aa13.79□□□□□ -0.2
TRAPPC3-204ENST00000373166 AMBPP02760 352 aa13.79□□□□□ -0.2
TRAPPC3-204ENST00000373166 CSNK1G2-AS1Q8NCQ2 148 aa13.79□□□□□ -0.2
TRAPPC3-204ENST00000373166 LRRC20Q8TCA0 184 aa13.79□□□□□ -0.2
TRAPPC3-204ENST00000373166 X6R8D5 127 aa13.79□□□□□ -0.2
TRAPPC3-204ENST00000373166 DEFB131BA0A096LNP1 70 aa13.78□□□□□ -0.2
TRAPPC3-204ENST00000373166 M0R2N4 97 aa13.78□□□□□ -0.2
TRAPPC3-204ENST00000373166 PET100P0DJ07 73 aa13.78□□□□□ -0.2
TRAPPC3-204ENST00000373166 FGF7P21781 194 aa13.78□□□□□ -0.2
TRAPPC3-204ENST00000373166 H2BFSP57053 126 aa13.78□□□□□ -0.2
TRAPPC3-204ENST00000373166 FAM78BQ5VT40 261 aa13.78□□□□□ -0.2
TRAPPC3-204ENST00000373166 MIC13Q5XKP0 118 aa13.78□□□□□ -0.2
TRAPPC3-204ENST00000373166 RNF182Q8N6D2 247 aa13.78□□□□□ -0.2
TRAPPC3-204ENST00000373166 OR1L4Q8NGR5 311 aa13.78□□□□□ -0.2
TRAPPC3-204ENST00000373166 PFDN5Q99471 154 aa13.78□□□□□ -0.2
TRAPPC3-204ENST00000373166 OR5AC2Q9NZP5 309 aa13.78□□□□□ -0.2
TRAPPC3-204ENST00000373166 TRAV8-2A0A0B4J237 113 aa13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 MPDU1O75352 247 aa13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 PTTG1O95997 202 aa13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 CXCL2P19875 107 aa13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 RPL29P47914 159 aaKnown RBP13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 FXYD7P58549 80 aa13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 B2MP61769 119 aa13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 PSG9Q00887 426 aa13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 OPCMLQ14982 345 aa13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 IGFL4Q6B9Z1 124 aa13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 BPIFA4PQ86YQ2 179 aa13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 ZNF738Q8NE65 137 aa13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 PPP1R1CQ8WVI7 109 aa13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 TMEM37Q8WXS4 190 aa13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 NDUFAF3Q9BU61 184 aa13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 DNAJC4Q9NNZ3 241 aa13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 SLC39A9Q9NUM3 307 aa13.77□□□□□ -0.21
TRAPPC3-204ENST00000373166 LGALS9BQ3B8N2 356 aa13.76□□□□□ -0.21
TRAPPC3-204ENST00000373166 LCN15Q6UWW0 184 aa13.76□□□□□ -0.21
TRAPPC3-204ENST00000373166 OR5C1Q8NGR4 320 aa13.76□□□□□ -0.21
TRAPPC3-204ENST00000373166 SLC35B3Q9H1N7 401 aa13.76□□□□□ -0.21
TRAPPC3-204ENST00000373166 H0YIZ8 118 aa13.75□□□□□ -0.21
TRAPPC3-204ENST00000373166 MRPS12O15235 138 aaKnown RBP13.75□□□□□ -0.21
TRAPPC3-204ENST00000373166 DUSP14O95147 198 aaKnown RBP13.75□□□□□ -0.21
TRAPPC3-204ENST00000373166 NHLH2Q02577 135 aa13.75□□□□□ -0.21
TRAPPC3-204ENST00000373166 C12orf74Q32Q52 190 aa13.75□□□□□ -0.21
TRAPPC3-204ENST00000373166 ZNF709Q8N972 641 aa13.75□□□□□ -0.21
TRAPPC3-204ENST00000373166 CHAC2Q8WUX2 184 aa13.75□□□□□ -0.21
TRAPPC3-204ENST00000373166 PXMP4Q9Y6I8 212 aa13.75□□□□□ -0.21
TRAPPC3-204ENST00000373166 CXCL3P19876 107 aa13.74□□□□□ -0.21
TRAPPC3-204ENST00000373166 CLINT1Q14677 625 aa13.74□□□□□ -0.21
TRAPPC3-204ENST00000373166 MORN5Q5VZ52 161 aa13.74□□□□□ -0.21
TRAPPC3-204ENST00000373166 ZNF767PQ75MW2 155 aa13.74□□□□□ -0.21
TRAPPC3-204ENST00000373166 THAP6Q8TBB0 222 aa13.74□□□□□ -0.21
TRAPPC3-204ENST00000373166 SLC50A1Q9BRV3 221 aa13.74□□□□□ -0.21
TRAPPC3-204ENST00000373166 NPCDR1Q9BY65 106 aa13.74□□□□□ -0.21
TRAPPC3-204ENST00000373166 KCNIP2Q9NS61 270 aa13.74□□□□□ -0.21
TRAPPC3-204ENST00000373166 CELA1Q9UNI1 258 aa13.74□□□□□ -0.21
TRAPPC3-204ENST00000373166 A8MTW9 85 aa13.73□□□□□ -0.21
TRAPPC3-204ENST00000373166 MPC2O95563 127 aa13.73□□□□□ -0.21
TRAPPC3-204ENST00000373166 CNN1P51911 297 aaKnown RBP13.73□□□□□ -0.21
TRAPPC3-204ENST00000373166 GOLT1BQ9Y3E0 138 aa13.73□□□□□ -0.21
TRAPPC3-204ENST00000373166 ALG5Q9Y673 324 aa13.73□□□□□ -0.21
TRAPPC3-204ENST00000373166 IGHV3OR16-12A0A075B7B8 117 aa13.72□□□□□ -0.21
TRAPPC3-204ENST00000373166 PSG3Q16557 428 aa13.72□□□□□ -0.21
TRAPPC3-204ENST00000373166 ZNF705AQ6ZN79 300 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC3-204ENST00000373166 KRTAP4-5Q9BYR2 181 aa13.72□□□□□ -0.21
TRAPPC3-204ENST00000373166 ZNF705FA8MVS1 300 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC3-204ENST00000373166 ZNF705DP0CH99 300 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC3-204ENST00000373166 ZNF705BP0CI00 300 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC3-204ENST00000373166 HIST1H1AQ02539 215 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC3-204ENST00000373166 GUK1Q16774 197 aa13.71□□□□□ -0.21
TRAPPC3-204ENST00000373166 NEU1Q99519 415 aa13.71□□□□□ -0.21
TRAPPC3-204ENST00000373166 ZNF331Q9NQX6 463 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC3-204ENST00000373166 TRAV5A0A0B4J249 113 aa13.7□□□□□ -0.22
TRAPPC3-204ENST00000373166 SMIM9A6NGZ8 99 aa13.7□□□□□ -0.22
TRAPPC3-204ENST00000373166 SNRPCP09234 159 aaKnown RBP13.7□□□□□ -0.22
TRAPPC3-204ENST00000373166 IGLC2P0DOY2 106 aa13.7□□□□□ -0.22
TRAPPC3-204ENST00000373166 SOHLH1Q5JUK2 328 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms