RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 H3BTX0 84 aa16.31■□□□□ 0.2
ECHDC1-203ENST00000368291 SLC17A3O00476 420 aa16.31■□□□□ 0.2
ECHDC1-203ENST00000368291 CXCL2P19875 107 aa16.31■□□□□ 0.2
ECHDC1-203ENST00000368291 EBLN2Q6P2I7 272 aa16.31■□□□□ 0.2
ECHDC1-203ENST00000368291 LCN15Q6UWW0 184 aa16.31■□□□□ 0.2
ECHDC1-203ENST00000368291 ZNF709Q8N972 641 aa16.31■□□□□ 0.2
ECHDC1-203ENST00000368291 SAT2Q96F10 170 aaPredicted RBP16.31■□□□□ 0.2
ECHDC1-203ENST00000368291 AQP10Q96PS8 301 aa16.31■□□□□ 0.2
ECHDC1-203ENST00000368291 PARD6GQ9BYG4 376 aaPredicted RBP16.31■□□□□ 0.2
ECHDC1-203ENST00000368291 HRH4Q9H3N8 390 aa16.31■□□□□ 0.2
ECHDC1-203ENST00000368291 ZNF331Q9NQX6 463 aaPredicted RBP16.31■□□□□ 0.2
ECHDC1-203ENST00000368291 NUTF2P61970 127 aaKnown RBP16.3■□□□□ 0.2
ECHDC1-203ENST00000368291 PSG3Q16557 428 aa16.3■□□□□ 0.2
ECHDC1-203ENST00000368291 OR4B1Q8NGF8 309 aa16.3■□□□□ 0.2
ECHDC1-203ENST00000368291 XCL2Q9UBD3 114 aa16.3■□□□□ 0.2
ECHDC1-203ENST00000368291 RFNGQ9Y644 331 aa16.3■□□□□ 0.2
ECHDC1-203ENST00000368291 STARD9Q9P2P6 4700 aa16.29■□□□□ 0.2
ECHDC1-203ENST00000368291 C17orf112F2Z3M2 114 aa16.29■□□□□ 0.2
ECHDC1-203ENST00000368291 G3V3Q6 166 aa16.29■□□□□ 0.2
ECHDC1-203ENST00000368291 FXYD7P58549 80 aa16.29■□□□□ 0.2
ECHDC1-203ENST00000368291 ZFAND6Q6FIF0 208 aa16.29■□□□□ 0.2
ECHDC1-203ENST00000368291 SLC35B3Q9H1N7 401 aa16.29■□□□□ 0.2
ECHDC1-203ENST00000368291 KCNIP2Q9NS61 270 aa16.29■□□□□ 0.2
ECHDC1-203ENST00000368291 ZNF586Q9NXT0 402 aa16.29■□□□□ 0.2
ECHDC1-203ENST00000368291 ZNF705EA8MWA4 302 aaPredicted RBP16.28■□□□□ 0.2
ECHDC1-203ENST00000368291 IFNA5P01569 189 aa16.28■□□□□ 0.2
ECHDC1-203ENST00000368291 ZNF705DP0CH99 300 aaPredicted RBP16.28■□□□□ 0.2
ECHDC1-203ENST00000368291 ZNF705BP0CI00 300 aaPredicted RBP16.28■□□□□ 0.2
ECHDC1-203ENST00000368291 AMTNQ6UX39 209 aa16.28■□□□□ 0.2
ECHDC1-203ENST00000368291 MIR17HGQ75NE6 70 aa16.28■□□□□ 0.2
ECHDC1-203ENST00000368291 ZNF738Q8NE65 137 aa16.28■□□□□ 0.2
ECHDC1-203ENST00000368291 IL17DQ8TAD2 202 aa16.28■□□□□ 0.2
ECHDC1-203ENST00000368291 LRRC20Q8TCA0 184 aa16.28■□□□□ 0.2
ECHDC1-203ENST00000368291 FAM167A-AS1Q96KT0 104 aa16.28■□□□□ 0.2
ECHDC1-203ENST00000368291 SLC50A1Q9BRV3 221 aa16.28■□□□□ 0.2
ECHDC1-203ENST00000368291 TMEM14CQ9P0S9 112 aa16.28■□□□□ 0.2
ECHDC1-203ENST00000368291 X6R8D5 127 aa16.28■□□□□ 0.2
ECHDC1-203ENST00000368291 PRB4P10163 310 aaPredicted RBP16.27■□□□□ 0.2
ECHDC1-203ENST00000368291 OR2T35Q8NGX2 323 aa16.27■□□□□ 0.2
ECHDC1-203ENST00000368291 SCGB1C1Q8TD33 95 aa16.27■□□□□ 0.2
ECHDC1-203ENST00000368291 SLC25A2Q9BXI2 301 aa16.27■□□□□ 0.2
ECHDC1-203ENST00000368291 C1QTNF4Q9BXJ3 329 aa16.27■□□□□ 0.2
ECHDC1-203ENST00000368291 RNF222A6NCQ9 220 aa16.26■□□□□ 0.19
ECHDC1-203ENST00000368291 PYYP10082 97 aa16.26■□□□□ 0.19
ECHDC1-203ENST00000368291 CNN1P51911 297 aaKnown RBP16.26■□□□□ 0.19
ECHDC1-203ENST00000368291 PSG9Q00887 426 aa16.26■□□□□ 0.19
ECHDC1-203ENST00000368291 Q8NAQ8 132 aa16.26■□□□□ 0.19
ECHDC1-203ENST00000368291 C11orf68Q9H3H3 251 aaKnown RBP16.26■□□□□ 0.19
ECHDC1-203ENST00000368291 FFAR4Q5NUL3 377 aa16.26■□□□□ 0.19
ECHDC1-203ENST00000368291 ZNF705FA8MVS1 300 aaPredicted RBP16.25■□□□□ 0.19
ECHDC1-203ENST00000368291 DEFB4AO15263 64 aa16.25■□□□□ 0.19
ECHDC1-203ENST00000368291 HIST1H1EP10412 219 aaKnown RBP16.25■□□□□ 0.19
ECHDC1-203ENST00000368291 GUK1Q16774 197 aa16.25■□□□□ 0.19
ECHDC1-203ENST00000368291 OR8A1Q8NGG7 326 aa16.25■□□□□ 0.19
ECHDC1-203ENST00000368291 RPUSD4Q96CM3 377 aaKnown RBP16.25■□□□□ 0.19
ECHDC1-203ENST00000368291 MRPL32Q9BYC8 188 aaKnown RBP16.25■□□□□ 0.19
ECHDC1-203ENST00000368291 MFFQ9GZY8 342 aa16.25■□□□□ 0.19
ECHDC1-203ENST00000368291 TNFSF18Q9UNG2 199 aa16.25■□□□□ 0.19
ECHDC1-203ENST00000368291 TRBV19A0A075B6N1 114 aa16.24■□□□□ 0.19
ECHDC1-203ENST00000368291 FXYD6-FXYD2A0A087WZ82 144 aa16.24■□□□□ 0.19
ECHDC1-203ENST00000368291 DUSP14O95147 198 aaKnown RBP16.24■□□□□ 0.19
ECHDC1-203ENST00000368291 NDUFB4O95168 129 aa16.24■□□□□ 0.19
ECHDC1-203ENST00000368291 RBMY1A1P0DJD3 496 aaKnown RBP16.24■□□□□ 0.19
ECHDC1-203ENST00000368291 RBMY1CP0DJD4 496 aa16.24■□□□□ 0.19
ECHDC1-203ENST00000368291 RBMY1FQ15415 496 aaKnown RBP16.24■□□□□ 0.19
ECHDC1-203ENST00000368291 ZNF705AQ6ZN79 300 aaPredicted RBP16.24■□□□□ 0.19
ECHDC1-203ENST00000368291 FUT9Q9Y231 359 aa16.24■□□□□ 0.19
ECHDC1-203ENST00000368291 KMT2CQ8NEZ4 4911 aaKnown RBP16.23■□□□□ 0.19
ECHDC1-203ENST00000368291 ZNF253O75346 499 aa16.23■□□□□ 0.19
ECHDC1-203ENST00000368291 IGHV4-28A0A0C4DH34 117 aa16.22■□□□□ 0.19
ECHDC1-203ENST00000368291 PRAC2D3DTV9 90 aa16.22■□□□□ 0.19
ECHDC1-203ENST00000368291 MIFP14174 115 aa16.22■□□□□ 0.19
ECHDC1-203ENST00000368291 HIST1H1AQ02539 215 aaPredicted RBP16.22■□□□□ 0.19
ECHDC1-203ENST00000368291 ZNF503Q96F45 646 aa16.22■□□□□ 0.19
ECHDC1-203ENST00000368291 TIMM9Q9Y5J7 89 aa16.22■□□□□ 0.19
ECHDC1-203ENST00000368291 ZNF266Q14584 549 aa16.21■□□□□ 0.19
ECHDC1-203ENST00000368291 C1orf158Q8N1D5 194 aa16.21■□□□□ 0.19
ECHDC1-203ENST00000368291 INO80EQ8NBZ0 244 aaPredicted RBP16.21■□□□□ 0.19
ECHDC1-203ENST00000368291 OR51M1Q9H341 326 aa16.21■□□□□ 0.19
ECHDC1-203ENST00000368291 DYNC2H1Q8NCM8 4307 aaKnown RBP16.21■□□□□ 0.19
ECHDC1-203ENST00000368291 SMLR1H3BR10 107 aa16.2■□□□□ 0.18
ECHDC1-203ENST00000368291 M0R2Z0 102 aa16.2■□□□□ 0.18
ECHDC1-203ENST00000368291 CRXO43186 299 aaPredicted RBP16.2■□□□□ 0.18
ECHDC1-203ENST00000368291 PDE6HQ13956 83 aa16.2■□□□□ 0.18
ECHDC1-203ENST00000368291 SPINK13Q1W4C9 94 aa16.2■□□□□ 0.18
ECHDC1-203ENST00000368291 BLNKQ8WV28 456 aa16.2■□□□□ 0.18
ECHDC1-203ENST00000368291 FXYD5Q96DB9 178 aa16.2■□□□□ 0.18
ECHDC1-203ENST00000368291 HSD17B11Q8NBQ5 300 aa16.19■□□□□ 0.18
ECHDC1-203ENST00000368291 NEU1Q99519 415 aa16.19■□□□□ 0.18
ECHDC1-203ENST00000368291 PAXXQ9BUH6 204 aa16.19■□□□□ 0.18
ECHDC1-203ENST00000368291 TENM2Q9NT68 2774 aa16.18■□□□□ 0.18
ECHDC1-203ENST00000368291 M0R3E3 92 aa16.18■□□□□ 0.18
ECHDC1-203ENST00000368291 EIF3GO75821 320 aaKnown RBP eCLIP16.18■□□□□ 0.18
ECHDC1-203ENST00000368291 OR10J4P0C629 311 aa16.18■□□□□ 0.18
ECHDC1-203ENST00000368291 NBEAP1P0C6P0 100 aa16.18■□□□□ 0.18
ECHDC1-203ENST00000368291 M6PRP20645 277 aa16.18■□□□□ 0.18
ECHDC1-203ENST00000368291 ATP6V0CP27449 155 aa16.18■□□□□ 0.18
ECHDC1-203ENST00000368291 RAB2AP61019 212 aa16.18■□□□□ 0.18
ECHDC1-203ENST00000368291 IGF2BP2-AS1Q96M15 143 aa16.18■□□□□ 0.18
ECHDC1-203ENST00000368291 BOLA2-SMG1P6H3BVE0 249 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms