RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 MORN5Q5VZ52 161 aa9.17□□□□□ -0.94
USF1-201ENST00000368019 RBPMS2Q6ZRY4 209 aaKnown RBP9.17□□□□□ -0.94
USF1-201ENST00000368019 NUP37Q8NFH4 326 aa9.17□□□□□ -0.94
USF1-201ENST00000368019 C22orf15Q8WYQ4 148 aa9.17□□□□□ -0.94
USF1-201ENST00000368019 LEAP2Q969E1 77 aa9.17□□□□□ -0.94
USF1-201ENST00000368019 URB1-AS1Q96HZ7 61 aa9.17□□□□□ -0.94
USF1-201ENST00000368019 SSBP3Q9BWW4 388 aaPredicted RBP9.17□□□□□ -0.94
USF1-201ENST00000368019 TMEM14CQ9P0S9 112 aa9.17□□□□□ -0.94
USF1-201ENST00000368019 WASHC3Q9Y3C0 194 aa9.17□□□□□ -0.94
USF1-201ENST00000368019 TRAV5A0A0B4J249 113 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 IGHV4-61A0A0C4DH41 118 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 OR4C46A6NHA9 309 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 HAX1O00165 279 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 SPRY3O43610 288 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 IGHV1-46P01743 117 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 IGKV1-16P04430 117 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 SLC25A5P05141 298 aaKnown RBP9.16□□□□□ -0.94
USF1-201ENST00000368019 TNFRSF1AP19438 455 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 LGALS7P47929 136 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 PCP4P48539 62 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 HINT1P49773 126 aaPredicted RBP9.16□□□□□ -0.94
USF1-201ENST00000368019 GNG10P50151 68 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 RBX1P62877 108 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 FBLN7Q53RD9 439 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 Q56UQ5 140 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 UTF1Q5T230 341 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 MRPL20Q9BYC9 149 aaKnown RBP9.16□□□□□ -0.94
USF1-201ENST00000368019 FNDC4Q9H6D8 234 aaPredicted RBP9.16□□□□□ -0.94
USF1-201ENST00000368019 HSPB8Q9UJY1 196 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 RNF24Q9Y225 148 aa9.16□□□□□ -0.94
USF1-201ENST00000368019 CGB1A6NKQ9 187 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 HSBP1L1C9JCN9 74 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 TOX4O94842 621 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 LEPROTL1O95214 131 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 CA1P00915 261 aaPredicted RBP9.15□□□□□ -0.94
USF1-201ENST00000368019 IGLV2-23P01705 113 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 P01737 135 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 IGHV3-7P01780 117 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 PPBPP02775 128 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 NBEAP1P0C6P0 100 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 PYYP10082 97 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 SRD5A1P18405 259 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 SRSF2Q01130 221 aaKnown RBP9.15□□□□□ -0.94
USF1-201ENST00000368019 SPRNQ5BIV9 151 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 LCN12Q6JVE5 192 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 SLC25A34Q6PIV7 304 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 ZNF841Q6ZN19 808 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 IL17RELQ6ZVW7 336 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 LINC00305Q7Z4B0 112 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 SPATA12Q7Z6I5 190 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 TEX45Q8NA69 505 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 OR10W1Q8NGF6 305 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 OR2T6Q8NHC8 308 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 NPIPB3Q92617 1050 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 PIMREGQ9BSJ6 248 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 OTORQ9NRC9 128 aa9.15□□□□□ -0.94
USF1-201ENST00000368019 LOC102724200A0A096LPH7 203 aaPredicted RBP9.14□□□□□ -0.95
USF1-201ENST00000368019 PGPA6NDG6 321 aa9.14□□□□□ -0.95
USF1-201ENST00000368019 B9A039 149 aa9.14□□□□□ -0.95
USF1-201ENST00000368019 MOSP00540 346 aa9.14□□□□□ -0.95
USF1-201ENST00000368019 TCRAP04437 139 aa9.14□□□□□ -0.95
USF1-201ENST00000368019 GP9P14770 177 aa9.14□□□□□ -0.95
USF1-201ENST00000368019 HIST1H1AQ02539 215 aaPredicted RBP9.14□□□□□ -0.95
USF1-201ENST00000368019 WT1-ASQ06250 92 aa9.14□□□□□ -0.95
USF1-201ENST00000368019 ADIPOQQ15848 244 aa9.14□□□□□ -0.95
USF1-201ENST00000368019 Q6AWC8 147 aa9.14□□□□□ -0.95
USF1-201ENST00000368019 UNQ5815/PRO19632Q6UWF5 114 aa9.14□□□□□ -0.95
USF1-201ENST00000368019 DEFB125Q8N687 156 aa9.14□□□□□ -0.95
USF1-201ENST00000368019 TMEM116Q8NCL8 245 aa9.14□□□□□ -0.95
USF1-201ENST00000368019 TNFRSF14Q92956 283 aa9.14□□□□□ -0.95
USF1-201ENST00000368019 ST6GALNAC6Q969X2 333 aa9.14□□□□□ -0.95
USF1-201ENST00000368019 CCL13Q99616 98 aa9.14□□□□□ -0.95
USF1-201ENST00000368019 SRSF8Q9BRL6 282 aaKnown RBP9.14□□□□□ -0.95
USF1-201ENST00000368019 MAP1LC3CQ9BXW4 147 aa9.14□□□□□ -0.95
USF1-201ENST00000368019 LOC105371242A0A075B767 164 aa9.13□□□□□ -0.95
USF1-201ENST00000368019 IGHV1-24A0A0C4DH33 117 aa9.13□□□□□ -0.95
USF1-201ENST00000368019 MLANAQ16655 118 aa9.13□□□□□ -0.95
USF1-201ENST00000368019 BVES-AS1Q5T3Y7 98 aa9.13□□□□□ -0.95
USF1-201ENST00000368019 LINC01545Q5VT33 79 aa9.13□□□□□ -0.95
USF1-201ENST00000368019 C8orf46Q8TAG6 207 aa9.13□□□□□ -0.95
USF1-201ENST00000368019 H1FXQ92522 213 aaKnown RBP9.13□□□□□ -0.95
USF1-201ENST00000368019 DAZAP1Q96EP5 407 aaKnown RBP9.13□□□□□ -0.95
USF1-201ENST00000368019 LINC00479Q96M42 142 aa9.13□□□□□ -0.95
USF1-201ENST00000368019 BPESC1Q9GZL8 116 aa9.13□□□□□ -0.95
USF1-201ENST00000368019 SCRT2Q9NQ03 307 aa9.13□□□□□ -0.95
USF1-201ENST00000368019 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.12□□□□□ -0.95
USF1-201ENST00000368019 TRAV34A0A0B4J273 112 aa9.12□□□□□ -0.95
USF1-201ENST00000368019 A0A1W2PPI3 338 aa9.12□□□□□ -0.95
USF1-201ENST00000368019 CHEK1O14757 476 aa9.12□□□□□ -0.95
USF1-201ENST00000368019 TGFAP01135 160 aa9.12□□□□□ -0.95
USF1-201ENST00000368019 APOHP02749 345 aaPredicted RBP9.12□□□□□ -0.95
USF1-201ENST00000368019 CAMPP49913 170 aa9.12□□□□□ -0.95
USF1-201ENST00000368019 RIGQ13278 110 aa9.12□□□□□ -0.95
USF1-201ENST00000368019 PSMG4Q5JS54 123 aa9.12□□□□□ -0.95
USF1-201ENST00000368019 Q86TA4 180 aa9.12□□□□□ -0.95
USF1-201ENST00000368019 ATOH7Q8N100 152 aa9.12□□□□□ -0.95
USF1-201ENST00000368019 LYPD1Q8N2G4 141 aa9.12□□□□□ -0.95
USF1-201ENST00000368019 FAM216BQ8N7L0 139 aa9.12□□□□□ -0.95
USF1-201ENST00000368019 OR4C5Q8NGB2 326 aa9.12□□□□□ -0.95
USF1-201ENST00000368019 RNASE8Q8TDE3 154 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms