RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 RNF141Q8WVD5 230 aa9.3□□□□□ -0.92
NIF3L1-201ENST00000359683 FXYD5Q96DB9 178 aa9.3□□□□□ -0.92
NIF3L1-201ENST00000359683 ZNF586Q9NXT0 402 aa9.3□□□□□ -0.92
NIF3L1-201ENST00000359683 G3V4G9 280 aa9.29□□□□□ -0.92
NIF3L1-201ENST00000359683 K7EQG2 157 aa9.29□□□□□ -0.92
NIF3L1-201ENST00000359683 CXorf1O96002 111 aa9.29□□□□□ -0.92
NIF3L1-201ENST00000359683 MEOX2P50222 304 aa9.29□□□□□ -0.92
NIF3L1-201ENST00000359683 GUK1Q16774 197 aa9.29□□□□□ -0.92
NIF3L1-201ENST00000359683 BEAN1Q3B7T3 259 aa9.29□□□□□ -0.92
NIF3L1-201ENST00000359683 LCN15Q6UWW0 184 aa9.29□□□□□ -0.92
NIF3L1-201ENST00000359683 SUN5Q8TC36 379 aa9.29□□□□□ -0.92
NIF3L1-201ENST00000359683 ZNF256Q9Y2P7 627 aaPredicted RBP9.29□□□□□ -0.92
NIF3L1-201ENST00000359683 PRKDCP78527 4128 aaKnown RBP9.28□□□□□ -0.92
NIF3L1-201ENST00000359683 MAP1LC3B2A6NCE7 125 aa9.28□□□□□ -0.92
NIF3L1-201ENST00000359683 DNASE2O00115 360 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-201ENST00000359683 SOCS3O14543 225 aa9.28□□□□□ -0.92
NIF3L1-201ENST00000359683 IFNA7P01567 189 aa9.28□□□□□ -0.92
NIF3L1-201ENST00000359683 H2AFB1P0C5Y9 115 aa9.28□□□□□ -0.92
NIF3L1-201ENST00000359683 NBEAP1P0C6P0 100 aa9.28□□□□□ -0.92
NIF3L1-201ENST00000359683 ARL14EPLP0DKL9 152 aa9.28□□□□□ -0.92
NIF3L1-201ENST00000359683 GUCA2BQ16661 112 aa9.28□□□□□ -0.92
NIF3L1-201ENST00000359683 WFDC3Q8IUB2 231 aa9.28□□□□□ -0.92
NIF3L1-201ENST00000359683 SFT2D1Q8WV19 159 aa9.28□□□□□ -0.92
NIF3L1-201ENST00000359683 SAT2Q96F10 170 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-201ENST00000359683 MAP1LC3BQ9GZQ8 125 aa9.28□□□□□ -0.92
NIF3L1-201ENST00000359683 ZMAT5Q9UDW3 170 aaKnown RBP9.28□□□□□ -0.92
NIF3L1-201ENST00000359683 NOTCH1P46531 2555 aa9.28□□□□□ -0.92
NIF3L1-201ENST00000359683 TRBV19A0A075B6N1 114 aa9.27□□□□□ -0.92
NIF3L1-201ENST00000359683 TRAV1-1A0A0B4J248 108 aa9.27□□□□□ -0.92
NIF3L1-201ENST00000359683 OR4C46A6NHA9 309 aa9.27□□□□□ -0.92
NIF3L1-201ENST00000359683 ZNF705EA8MWA4 302 aaPredicted RBP9.27□□□□□ -0.92
NIF3L1-201ENST00000359683 SNRPCP09234 159 aaKnown RBP9.27□□□□□ -0.92
NIF3L1-201ENST00000359683 OR10J4P0C629 311 aa9.27□□□□□ -0.92
NIF3L1-201ENST00000359683 GCHFRP30047 84 aa9.27□□□□□ -0.92
NIF3L1-201ENST00000359683 TFPI2P48307 235 aa9.27□□□□□ -0.92
NIF3L1-201ENST00000359683 TGP01266 2768 aa9.27□□□□□ -0.93
NIF3L1-201ENST00000359683 ZNF253O75346 499 aa9.27□□□□□ -0.93
NIF3L1-201ENST00000359683 NDUFB4O95168 129 aa9.27□□□□□ -0.93
NIF3L1-201ENST00000359683 FGF8P55075 233 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-201ENST00000359683 KRTAP10-11P60412 298 aa9.27□□□□□ -0.93
NIF3L1-201ENST00000359683 UBE2L3P68036 154 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-201ENST00000359683 BLOC1S1P78537 153 aa9.27□□□□□ -0.93
NIF3L1-201ENST00000359683 IFITM2Q01629 132 aa9.27□□□□□ -0.93
NIF3L1-201ENST00000359683 PDE6HQ13956 83 aa9.27□□□□□ -0.93
NIF3L1-201ENST00000359683 SAMD13Q5VXD3 122 aa9.27□□□□□ -0.93
NIF3L1-201ENST00000359683 LRRC20Q8TCA0 184 aa9.27□□□□□ -0.93
NIF3L1-201ENST00000359683 ZNF331Q9NQX6 463 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-201ENST00000359683 TMEM167BQ9NRX6 74 aa9.27□□□□□ -0.93
NIF3L1-201ENST00000359683 TRAV8-2A0A0B4J237 113 aa9.26□□□□□ -0.93
NIF3L1-201ENST00000359683 H3BTX0 84 aa9.26□□□□□ -0.93
NIF3L1-201ENST00000359683 ISLRO14498 428 aa9.26□□□□□ -0.93
NIF3L1-201ENST00000359683 KPRPQ5T749 579 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-201ENST00000359683 FAM24BQ8N5W8 94 aa9.26□□□□□ -0.93
NIF3L1-201ENST00000359683 BLNKQ8WV28 456 aa9.26□□□□□ -0.93
NIF3L1-201ENST00000359683 SLC50A1Q9BRV3 221 aa9.26□□□□□ -0.93
NIF3L1-201ENST00000359683 TMPRSS5Q9H3S3 457 aa9.26□□□□□ -0.93
NIF3L1-201ENST00000359683 UBQLN2Q9UHD9 624 aa9.26□□□□□ -0.93
NIF3L1-201ENST00000359683 SLC17A3O00476 420 aa9.25□□□□□ -0.93
NIF3L1-201ENST00000359683 HBE1P02100 147 aa9.25□□□□□ -0.93
NIF3L1-201ENST00000359683 ID1P41134 155 aa9.25□□□□□ -0.93
NIF3L1-201ENST00000359683 PSMB3P49720 205 aa9.25□□□□□ -0.93
NIF3L1-201ENST00000359683 CMC4P56277 68 aaPredicted RBP9.25□□□□□ -0.93
NIF3L1-201ENST00000359683 C16orf92Q96LL3 132 aa9.25□□□□□ -0.93
NIF3L1-201ENST00000359683 FAM110AQ9BQ89 295 aa9.25□□□□□ -0.93
NIF3L1-201ENST00000359683 CD7P09564 240 aa9.24□□□□□ -0.93
NIF3L1-201ENST00000359683 CCL20P78556 96 aa9.24□□□□□ -0.93
NIF3L1-201ENST00000359683 PSG9Q00887 426 aa9.24□□□□□ -0.93
NIF3L1-201ENST00000359683 IGFL4Q6B9Z1 124 aa9.24□□□□□ -0.93
NIF3L1-201ENST00000359683 LYPD1Q8N2G4 141 aa9.24□□□□□ -0.93
NIF3L1-201ENST00000359683 LYPD6BQ8NI32 183 aa9.24□□□□□ -0.93
NIF3L1-201ENST00000359683 C19orf73Q9NVV2 129 aa9.24□□□□□ -0.93
NIF3L1-201ENST00000359683 CLEC5AQ9NY25 188 aa9.24□□□□□ -0.93
NIF3L1-201ENST00000359683 TEX46H3BTG2 121 aa9.23□□□□□ -0.93
NIF3L1-201ENST00000359683 SNRPD3P62318 126 aaKnown RBP9.23□□□□□ -0.93
NIF3L1-201ENST00000359683 RANP62826 216 aaKnown RBP9.23□□□□□ -0.93
NIF3L1-201ENST00000359683 PMS2P11Q13670 270 aa9.23□□□□□ -0.93
NIF3L1-201ENST00000359683 ZNF767PQ75MW2 155 aa9.23□□□□□ -0.93
NIF3L1-201ENST00000359683 C20orf173Q96LM9 149 aa9.23□□□□□ -0.93
NIF3L1-201ENST00000359683 A0A1B0GV50 99 aa9.23□□□□□ -0.93
NIF3L1-201ENST00000359683 ZNF688P0C7X2 276 aa9.23□□□□□ -0.93
NIF3L1-201ENST00000359683 HLA-DMBP28068 263 aa9.23□□□□□ -0.93
NIF3L1-201ENST00000359683 PSG3Q16557 428 aa9.23□□□□□ -0.93
NIF3L1-201ENST00000359683 ODF3L2Q3SX64 289 aa9.23□□□□□ -0.93
NIF3L1-201ENST00000359683 IQCF2Q8IXL9 164 aa9.23□□□□□ -0.93
NIF3L1-201ENST00000359683 Q8N1Y9 231 aa9.23□□□□□ -0.93
NIF3L1-201ENST00000359683 MAP6D1Q9H9H5 199 aa9.23□□□□□ -0.93
NIF3L1-201ENST00000359683 A0A1W2PRE2 83 aa9.22□□□□□ -0.93
NIF3L1-201ENST00000359683 NMBP08949 121 aa9.22□□□□□ -0.93
NIF3L1-201ENST00000359683 PPT1P50897 306 aa9.22□□□□□ -0.93
NIF3L1-201ENST00000359683 DEFB131AP59861 70 aa9.22□□□□□ -0.93
NIF3L1-201ENST00000359683 CD81P60033 236 aa9.22□□□□□ -0.93
NIF3L1-201ENST00000359683 PSMG4Q5JS54 123 aa9.22□□□□□ -0.93
NIF3L1-201ENST00000359683 GTSCR1Q86UQ5 136 aa9.22□□□□□ -0.93
NIF3L1-201ENST00000359683 EXOC3-AS1Q8N2X6 119 aa9.22□□□□□ -0.93
NIF3L1-201ENST00000359683 RNF182Q8N6D2 247 aa9.22□□□□□ -0.93
NIF3L1-201ENST00000359683 LINC00052Q96N35 136 aa9.22□□□□□ -0.93
NIF3L1-201ENST00000359683 PRR25Q96S07 402 aa9.22□□□□□ -0.93
NIF3L1-201ENST00000359683 Q9H3A6 140 aa9.22□□□□□ -0.93
NIF3L1-201ENST00000359683 AAMDCQ9H7C9 122 aa9.22□□□□□ -0.93
NIF3L1-201ENST00000359683 OTORQ9NRC9 128 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms