RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 KLHDC3Q9BQ90 382 aa10.47□□□□□ -0.73
NLRC3-202ENST00000359128 U3KQA8 63 aa10.47□□□□□ -0.73
NLRC3-202ENST00000359128 C22orf46C9J442 243 aa10.47□□□□□ -0.73
NLRC3-202ENST00000359128 NTF4P34130 210 aa10.47□□□□□ -0.73
NLRC3-202ENST00000359128 TIMM21Q9BVV7 248 aa10.47□□□□□ -0.73
NLRC3-202ENST00000359128 LIME1Q9H400 295 aa10.46□□□□□ -0.73
NLRC3-202ENST00000359128 NDUFA4O00483 81 aa10.46□□□□□ -0.73
NLRC3-202ENST00000359128 C5orf24Q7Z6I8 188 aa10.46□□□□□ -0.73
NLRC3-202ENST00000359128 ANK1P16157 1881 aa10.46□□□□□ -0.73
NLRC3-202ENST00000359128 SRSF4Q08170 494 aaKnown RBP10.46□□□□□ -0.73
NLRC3-202ENST00000359128 AGMATQ9BSE5 352 aa10.46□□□□□ -0.73
NLRC3-202ENST00000359128 CABIN1Q9Y6J0 2220 aa10.46□□□□□ -0.74
NLRC3-202ENST00000359128 PRIMA1Q86XR5 153 aa10.46□□□□□ -0.74
NLRC3-202ENST00000359128 TMEM126AQ9H061 195 aa10.46□□□□□ -0.74
NLRC3-202ENST00000359128 A0A1W2PPI3 338 aa10.46□□□□□ -0.74
NLRC3-202ENST00000359128 A0A1B0GV90 55 aa10.45□□□□□ -0.74
NLRC3-202ENST00000359128 BTCP35070 178 aa10.45□□□□□ -0.74
NLRC3-202ENST00000359128 VWC2LB2RUY7 222 aa10.45□□□□□ -0.74
NLRC3-202ENST00000359128 ZNF833PQ6ZTB9 187 aa10.45□□□□□ -0.74
NLRC3-202ENST00000359128 LY6G6FQ5SQ64 297 aa10.45□□□□□ -0.74
NLRC3-202ENST00000359128 FAM120AOSQ5T036 256 aa10.45□□□□□ -0.74
NLRC3-202ENST00000359128 C9orf66Q5T8R8 295 aa10.45□□□□□ -0.74
NLRC3-202ENST00000359128 SPXQ9BT56 116 aa10.45□□□□□ -0.74
NLRC3-202ENST00000359128 PDE6HQ13956 83 aa10.45□□□□□ -0.74
NLRC3-202ENST00000359128 LY6G5BQ8NDX9 201 aa10.45□□□□□ -0.74
NLRC3-202ENST00000359128 IGF2BP2-AS1Q96M15 143 aa10.45□□□□□ -0.74
NLRC3-202ENST00000359128 PRR31Q5SQ13 230 aa10.45□□□□□ -0.74
NLRC3-202ENST00000359128 FNDC4Q9H6D8 234 aaPredicted RBP10.44□□□□□ -0.74
NLRC3-202ENST00000359128 A8MXK9 166 aa10.44□□□□□ -0.74
NLRC3-202ENST00000359128 FNDC10F2Z333 226 aa10.44□□□□□ -0.74
NLRC3-202ENST00000359128 TMEM158Q8WZ71 300 aa10.44□□□□□ -0.74
NLRC3-202ENST00000359128 H0YIZ8 118 aa10.44□□□□□ -0.74
NLRC3-202ENST00000359128 IGHV1OR15-1A0A075B7D0 117 aa10.44□□□□□ -0.74
NLRC3-202ENST00000359128 TMEM75Q8N9X5 138 aa10.44□□□□□ -0.74
NLRC3-202ENST00000359128 FRMPD3Q5JV73 1810 aa10.44□□□□□ -0.74
NLRC3-202ENST00000359128 A8MWV9 139 aa10.44□□□□□ -0.74
NLRC3-202ENST00000359128 ELANEP08246 267 aa10.44□□□□□ -0.74
NLRC3-202ENST00000359128 ARMS2P0C7Q2 107 aa10.44□□□□□ -0.74
NLRC3-202ENST00000359128 TMEM14EPQ6UXP3 125 aa10.44□□□□□ -0.74
NLRC3-202ENST00000359128 ORAOV1Q8WV07 137 aa10.44□□□□□ -0.74
NLRC3-202ENST00000359128 KIAA1671Q9BY89 1806 aa10.44□□□□□ -0.74
NLRC3-202ENST00000359128 GAGE6Q13070 117 aa10.43□□□□□ -0.74
NLRC3-202ENST00000359128 LHFPL1Q86WI0 220 aa10.43□□□□□ -0.74
NLRC3-202ENST00000359128 NUP35Q8NFH5 326 aa10.43□□□□□ -0.74
NLRC3-202ENST00000359128 VPREB3Q9UKI3 123 aa10.43□□□□□ -0.74
NLRC3-202ENST00000359128 PLXNA3P51805 1871 aa10.43□□□□□ -0.74
NLRC3-202ENST00000359128 A0A096LPF7 62 aa10.43□□□□□ -0.74
NLRC3-202ENST00000359128 DKK4Q9UBT3 224 aa10.43□□□□□ -0.74
NLRC3-202ENST00000359128 TMEM243Q9BU79 118 aa10.43□□□□□ -0.74
NLRC3-202ENST00000359128 SNHG12Q9BXW3 62 aa10.43□□□□□ -0.74
NLRC3-202ENST00000359128 SMKR1H3BMG3 65 aa10.43□□□□□ -0.74
NLRC3-202ENST00000359128 YPEL3P61236 119 aaPredicted RBP10.43□□□□□ -0.74
NLRC3-202ENST00000359128 MLANAQ16655 118 aa10.43□□□□□ -0.74
NLRC3-202ENST00000359128 Q86TA4 180 aa10.43□□□□□ -0.74
NLRC3-202ENST00000359128 MRPL27Q9P0M9 148 aaKnown RBP10.43□□□□□ -0.74
NLRC3-202ENST00000359128 TRAV8-1A0A0A6YYK1 113 aa10.43□□□□□ -0.74
NLRC3-202ENST00000359128 HOXB4P17483 251 aaPredicted RBP10.43□□□□□ -0.74
NLRC3-202ENST00000359128 HIST1H4AP62805 103 aaKnown RBP10.43□□□□□ -0.74
NLRC3-202ENST00000359128 SRSF3P84103 164 aaKnown RBP10.43□□□□□ -0.74
NLRC3-202ENST00000359128 TRAV12-2A0A075B6T6 113 aa10.42□□□□□ -0.74
NLRC3-202ENST00000359128 C15orf62A8K5M9 175 aa10.42□□□□□ -0.74
NLRC3-202ENST00000359128 I3L3M4 83 aa10.42□□□□□ -0.74
NLRC3-202ENST00000359128 DEFB112Q30KQ8 113 aa10.42□□□□□ -0.74
NLRC3-202ENST00000359128 C8orf49Q96NF6 230 aa10.42□□□□□ -0.74
NLRC3-202ENST00000359128 CCL24O00175 119 aa10.42□□□□□ -0.74
NLRC3-202ENST00000359128 DNAJC30Q96LL9 226 aa10.42□□□□□ -0.74
NLRC3-202ENST00000359128 TCF15Q12870 199 aa10.42□□□□□ -0.74
NLRC3-202ENST00000359128 PMVKQ15126 192 aa10.42□□□□□ -0.74
NLRC3-202ENST00000359128 CDKN1BP46527 198 aa10.42□□□□□ -0.74
NLRC3-202ENST00000359128 IFITM2Q01629 132 aa10.42□□□□□ -0.74
NLRC3-202ENST00000359128 TEX36Q5VZQ5 186 aa10.42□□□□□ -0.74
NLRC3-202ENST00000359128 RPP25LQ8N5L8 163 aaKnown RBP10.42□□□□□ -0.74
NLRC3-202ENST00000359128 DERL1Q9BUN8 251 aa10.42□□□□□ -0.74
NLRC3-202ENST00000359128 C8orf86Q6ZUL3 223 aa10.42□□□□□ -0.74
NLRC3-202ENST00000359128 ZNF114Q8NC26 417 aa10.42□□□□□ -0.74
NLRC3-202ENST00000359128 HSD52Q0P140 79 aa10.41□□□□□ -0.74
NLRC3-202ENST00000359128 DMRTC2Q8IXT2 367 aaPredicted RBP10.41□□□□□ -0.74
NLRC3-202ENST00000359128 ZNF581Q9P0T4 197 aa10.41□□□□□ -0.74
NLRC3-202ENST00000359128 CLDN16Q9Y5I7 305 aa10.41□□□□□ -0.74
NLRC3-202ENST00000359128 DNAJC13O75165 2243 aa10.41□□□□□ -0.74
NLRC3-202ENST00000359128 ZNRF2Q8NHG8 242 aa10.41□□□□□ -0.74
NLRC3-202ENST00000359128 LMO1P25800 156 aa10.41□□□□□ -0.74
NLRC3-202ENST00000359128 LOXP28300 417 aaPredicted RBP10.41□□□□□ -0.74
NLRC3-202ENST00000359128 C1orf194Q5T5A4 169 aa10.41□□□□□ -0.74
NLRC3-202ENST00000359128 KLF2Q9Y5W3 355 aaPredicted RBP10.41□□□□□ -0.74
NLRC3-202ENST00000359128 SPTBP11277 2137 aa10.41□□□□□ -0.74
NLRC3-202ENST00000359128 TRIOBPQ9H2D6 2365 aa10.41□□□□□ -0.74
NLRC3-202ENST00000359128 IGHV2-5P01817 119 aa10.41□□□□□ -0.74
NLRC3-202ENST00000359128 Q6ZS49 121 aa10.41□□□□□ -0.74
NLRC3-202ENST00000359128 HS3ST6Q96QI5 342 aa10.4□□□□□ -0.74
NLRC3-202ENST00000359128 EDA2RQ9HAV5 297 aa10.4□□□□□ -0.74
NLRC3-202ENST00000359128 FGF16O43320 207 aa10.4□□□□□ -0.74
NLRC3-202ENST00000359128 C17orf58Q2M2W7 97 aa10.4□□□□□ -0.74
NLRC3-202ENST00000359128 ZNF479Q96JC4 524 aa10.4□□□□□ -0.74
NLRC3-202ENST00000359128 DUX4L9Q6RFH8 374 aaPredicted RBP10.4□□□□□ -0.74
NLRC3-202ENST00000359128 PKIGQ9Y2B9 76 aa10.4□□□□□ -0.74
NLRC3-202ENST00000359128 PFN1P07737 140 aaKnown RBP10.4□□□□□ -0.75
NLRC3-202ENST00000359128 RNF144BQ7Z419 303 aa10.4□□□□□ -0.75
NLRC3-202ENST00000359128 LAMTOR2Q9Y2Q5 125 aa10.4□□□□□ -0.75
NLRC3-202ENST00000359128 IGHV7-4-1A0A0J9YVY3 117 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms