RNA–Protein interactions for RNA: ENST00000358933.9

EDC4-201, Transcript of enhancer of mRNA decapping 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC4, Length 4,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-201ENST00000358933 LINC01560Q8TB33 94 aa16.57■□□□□ 0.24
EDC4-201ENST00000358933 RNF5Q99942 180 aa16.57■□□□□ 0.24
EDC4-201ENST00000358933 HEATR1Q9H583 2144 aaKnown RBP16.57■□□□□ 0.24
EDC4-201ENST00000358933 PDE6HQ13956 83 aa16.57■□□□□ 0.24
EDC4-201ENST00000358933 TRAV8-3A0A0A6YYJ7 113 aa16.57■□□□□ 0.24
EDC4-201ENST00000358933 H3BMG7 143 aa16.57■□□□□ 0.24
EDC4-201ENST00000358933 SIGLEC15Q6ZMC9 328 aa16.57■□□□□ 0.24
EDC4-201ENST00000358933 TMEM200BQ69YZ2 307 aa16.56■□□□□ 0.24
EDC4-201ENST00000358933 SPRR3Q9UBC9 169 aa16.56■□□□□ 0.24
EDC4-201ENST00000358933 HEATR5AQ86XA9 2040 aa16.56■□□□□ 0.24
EDC4-201ENST00000358933 IGKV1D-17A0A075B6S4 117 aa16.56■□□□□ 0.24
EDC4-201ENST00000358933 PRSS46E5RG02 174 aa16.56■□□□□ 0.24
EDC4-201ENST00000358933 NPC2P61916 151 aa16.56■□□□□ 0.24
EDC4-201ENST00000358933 LINC01587Q99440 93 aa16.56■□□□□ 0.24
EDC4-201ENST00000358933 HIST1H4AP62805 103 aaKnown RBP16.56■□□□□ 0.24
EDC4-201ENST00000358933 TDRG1Q3Y452 100 aa16.56■□□□□ 0.24
EDC4-201ENST00000358933 C14orf178Q8N769 122 aaPredicted RBP16.56■□□□□ 0.24
EDC4-201ENST00000358933 TMEM75Q8N9X5 138 aa16.56■□□□□ 0.24
EDC4-201ENST00000358933 NEU4Q8WWR8 484 aaPredicted RBP16.56■□□□□ 0.24
EDC4-201ENST00000358933 CITED1Q99966 193 aa16.56■□□□□ 0.24
EDC4-201ENST00000358933 IGHV1-8P0DP01 117 aa16.55■□□□□ 0.24
EDC4-201ENST00000358933 CENPVQ7Z7K6 275 aaPredicted RBP16.55■□□□□ 0.24
EDC4-201ENST00000358933 FAM57AQ8TBR7 257 aa16.55■□□□□ 0.24
EDC4-201ENST00000358933 SHANK2-AS3Q9BTD1 123 aa16.55■□□□□ 0.24
EDC4-201ENST00000358933 ETV2O00321 342 aaPredicted RBP16.55■□□□□ 0.24
EDC4-201ENST00000358933 DUSP14O95147 198 aaKnown RBP16.55■□□□□ 0.24
EDC4-201ENST00000358933 NUPR1O60356 82 aa16.55■□□□□ 0.24
EDC4-201ENST00000358933 TAL2Q16559 108 aa16.55■□□□□ 0.24
EDC4-201ENST00000358933 ZNF876PQ49A33 203 aa16.55■□□□□ 0.24
EDC4-201ENST00000358933 CACNA1GO43497 2377 aa16.55■□□□□ 0.24
EDC4-201ENST00000358933 CNOT1A5YKK6 2376 aaKnown RBP16.55■□□□□ 0.24
EDC4-201ENST00000358933 IGHV1-3A0A0C4DH29 117 aa16.54■□□□□ 0.24
EDC4-201ENST00000358933 CREBBPQ92793 2442 aa16.54■□□□□ 0.24
EDC4-201ENST00000358933 DOCK10Q96BY6 2186 aa16.54■□□□□ 0.24
EDC4-201ENST00000358933 PAX8Q06710 450 aa16.54■□□□□ 0.24
EDC4-201ENST00000358933 FER1L5A0AVI2 2057 aa16.54■□□□□ 0.24
EDC4-201ENST00000358933 H3BMM0 161 aa16.54■□□□□ 0.24
EDC4-201ENST00000358933 UBE2WQ96B02 151 aa16.54■□□□□ 0.24
EDC4-201ENST00000358933 PIMREGQ9BSJ6 248 aa16.54■□□□□ 0.24
EDC4-201ENST00000358933 SIGLEC9Q9Y336 463 aa16.54■□□□□ 0.24
EDC4-201ENST00000358933 K7EN84 100 aa16.54■□□□□ 0.24
EDC4-201ENST00000358933 TRGV11A0A075B6L2 103 aa16.53■□□□□ 0.24
EDC4-201ENST00000358933 C9orf172C9J069 976 aa16.53■□□□□ 0.24
EDC4-201ENST00000358933 LMO1P25800 156 aa16.53■□□□□ 0.24
EDC4-201ENST00000358933 B3GALT5-AS1P59052 145 aa16.53■□□□□ 0.24
EDC4-201ENST00000358933 CEND1Q8N111 149 aa16.53■□□□□ 0.24
EDC4-201ENST00000358933 Q8N8P6 123 aa16.53■□□□□ 0.24
EDC4-201ENST00000358933 WNT2P09544 360 aa16.53■□□□□ 0.24
EDC4-201ENST00000358933 IFITM1P13164 125 aa16.53■□□□□ 0.24
EDC4-201ENST00000358933 C15orf32Q32M92 178 aa16.53■□□□□ 0.24
EDC4-201ENST00000358933 C9orf139Q6ZV77 190 aa16.53■□□□□ 0.24
EDC4-201ENST00000358933 SIGLEC8Q9NYZ4 499 aa16.53■□□□□ 0.24
EDC4-201ENST00000358933 MYMXA0A1B0GTQ4 84 aa16.52■□□□□ 0.24
EDC4-201ENST00000358933 SLC25A20O43772 301 aa16.52■□□□□ 0.24
EDC4-201ENST00000358933 KLF5Q13887 457 aaPredicted RBP16.52■□□□□ 0.24
EDC4-201ENST00000358933 ZNF474Q6S9Z5 364 aaPredicted RBP16.52■□□□□ 0.24
EDC4-201ENST00000358933 WIPF2Q8TF74 440 aaPredicted RBP16.52■□□□□ 0.24
EDC4-201ENST00000358933 ZFP36L1Q07352 338 aaKnown RBP16.52■□□□□ 0.23
EDC4-201ENST00000358933 MRPL51Q4U2R6 128 aaKnown RBP16.52■□□□□ 0.23
EDC4-201ENST00000358933 ABHD17AQ96GS6 310 aa16.52■□□□□ 0.23
EDC4-201ENST00000358933 MYLKQ15746 1914 aa16.52■□□□□ 0.23
EDC4-201ENST00000358933 S100A7L2Q5SY68 101 aa16.52■□□□□ 0.23
EDC4-201ENST00000358933 SLC25A16P16260 332 aa16.51■□□□□ 0.23
EDC4-201ENST00000358933 CFAP161Q6P656 301 aa16.51■□□□□ 0.23
EDC4-201ENST00000358933 AMTNQ6UX39 209 aa16.51■□□□□ 0.23
EDC4-201ENST00000358933 ZNF524Q96C55 264 aa16.51■□□□□ 0.23
EDC4-201ENST00000358933 SCN5AQ14524 2016 aa16.51■□□□□ 0.23
EDC4-201ENST00000358933 ITLN2Q8WWU7 325 aaPredicted RBP16.51■□□□□ 0.23
EDC4-201ENST00000358933 LINC00477Q96M19 166 aa16.51■□□□□ 0.23
EDC4-201ENST00000358933 A0A1W2PPI3 338 aa16.51■□□□□ 0.23
EDC4-201ENST00000358933 SHANK1Q9Y566 2161 aa16.51■□□□□ 0.23
EDC4-201ENST00000358933 WISP1O95388 367 aa16.51■□□□□ 0.23
EDC4-201ENST00000358933 CRPP02741 224 aa16.51■□□□□ 0.23
EDC4-201ENST00000358933 NEGR1Q7Z3B1 354 aa16.51■□□□□ 0.23
EDC4-201ENST00000358933 TMEM86BQ8N661 226 aa16.51■□□□□ 0.23
EDC4-201ENST00000358933 ZNF883P0CG24 379 aa16.5■□□□□ 0.23
EDC4-201ENST00000358933 TRPM7Q96QT4 1865 aa16.5■□□□□ 0.23
EDC4-201ENST00000358933 K7ERJ3 54 aa16.5■□□□□ 0.23
EDC4-201ENST00000358933 IGFL4Q6B9Z1 124 aa16.5■□□□□ 0.23
EDC4-201ENST00000358933 DEFB104AQ8WTQ1 72 aa16.5■□□□□ 0.23
EDC4-201ENST00000358933 RNASE6Q93091 150 aaKnown RBP16.5■□□□□ 0.23
EDC4-201ENST00000358933 GAFA1Q96PS6 74 aa16.5■□□□□ 0.23
EDC4-201ENST00000358933 ZNF747Q9BV97 191 aa16.5■□□□□ 0.23
EDC4-201ENST00000358933 C2orf66Q6UXQ4 117 aa16.49■□□□□ 0.23
EDC4-201ENST00000358933 TIMM21Q9BVV7 248 aa16.49■□□□□ 0.23
EDC4-201ENST00000358933 TRIOBPQ9H2D6 2365 aa16.49■□□□□ 0.23
EDC4-201ENST00000358933 GAGE12JA6NER3 117 aa16.49■□□□□ 0.23
EDC4-201ENST00000358933 GAGE7O76087 117 aa16.49■□□□□ 0.23
EDC4-201ENST00000358933 GAGE12FP0CL80 117 aa16.49■□□□□ 0.23
EDC4-201ENST00000358933 GAGE12GP0CL81 117 aa16.49■□□□□ 0.23
EDC4-201ENST00000358933 GAGE12IP0CL82 117 aa16.49■□□□□ 0.23
EDC4-201ENST00000358933 GAGE4Q13068 117 aa16.49■□□□□ 0.23
EDC4-201ENST00000358933 XIRP1Q702N8 1843 aaKnown RBP16.49■□□□□ 0.23
EDC4-201ENST00000358933 SRRM4A7MD48 611 aaKnown RBP16.49■□□□□ 0.23
EDC4-201ENST00000358933 LINC00158P58513 81 aa16.49■□□□□ 0.23
EDC4-201ENST00000358933 NDUFA4L2Q9NRX3 87 aa16.49■□□□□ 0.23
EDC4-201ENST00000358933 ZNF688P0C7X2 276 aa16.48■□□□□ 0.23
EDC4-201ENST00000358933 RSPO1Q2MKA7 263 aaPredicted RBP16.48■□□□□ 0.23
EDC4-201ENST00000358933 GATD1Q8NB37 220 aa16.48■□□□□ 0.23
EDC4-201ENST00000358933 MRPL35Q9NZE8 188 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms