RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 RNF5Q99942 180 aa11.32□□□□□ -0.6
SIRPA-202ENST00000358771 BMI1P35226 326 aa11.32□□□□□ -0.6
SIRPA-202ENST00000358771 SLAQ13239 276 aa11.32□□□□□ -0.6
SIRPA-202ENST00000358771 FAM167A-AS1Q96KT0 104 aa11.32□□□□□ -0.6
SIRPA-202ENST00000358771 PYGO2Q9BRQ0 406 aa11.32□□□□□ -0.6
SIRPA-202ENST00000358771 MCRIP2Q9BUT9 160 aaKnown RBP11.32□□□□□ -0.6
SIRPA-202ENST00000358771 CFAP47Q6ZTR5 3102 aa11.31□□□□□ -0.6
SIRPA-202ENST00000358771 F5H697 171 aa11.31□□□□□ -0.6
SIRPA-202ENST00000358771 NDUFS6O75380 124 aaKnown RBP11.31□□□□□ -0.6
SIRPA-202ENST00000358771 TMEM249Q2WGJ8 235 aa11.31□□□□□ -0.6
SIRPA-202ENST00000358771 FAM120AOSQ5T036 256 aa11.31□□□□□ -0.6
SIRPA-202ENST00000358771 GLMPQ8WWB7 406 aa11.31□□□□□ -0.6
SIRPA-202ENST00000358771 AP5S1Q9NUS5 200 aa11.31□□□□□ -0.6
SIRPA-202ENST00000358771 SRD5A1P18405 259 aa11.31□□□□□ -0.6
SIRPA-202ENST00000358771 Q8N7P7 452 aa11.31□□□□□ -0.6
SIRPA-202ENST00000358771 OR4B1Q8NGF8 309 aa11.31□□□□□ -0.6
SIRPA-202ENST00000358771 JKAMPQ9P055 326 aa11.31□□□□□ -0.6
SIRPA-202ENST00000358771 TET2Q6N021 2002 aaPredicted RBP11.31□□□□□ -0.6
SIRPA-202ENST00000358771 ZNF462Q96JM2 2506 aa11.3□□□□□ -0.6
SIRPA-202ENST00000358771 ATP6V0E1O15342 81 aa11.3□□□□□ -0.6
SIRPA-202ENST00000358771 TGFAP01135 160 aa11.3□□□□□ -0.6
SIRPA-202ENST00000358771 APOHP02749 345 aaPredicted RBP11.3□□□□□ -0.6
SIRPA-202ENST00000358771 FCER1GP30273 86 aa11.3□□□□□ -0.6
SIRPA-202ENST00000358771 SNAI2O43623 268 aa11.3□□□□□ -0.6
SIRPA-202ENST00000358771 FXYD7P58549 80 aa11.3□□□□□ -0.6
SIRPA-202ENST00000358771 VAMP3Q15836 100 aa11.3□□□□□ -0.6
SIRPA-202ENST00000358771 SAPCD1Q5SSQ6 148 aa11.3□□□□□ -0.6
SIRPA-202ENST00000358771 NPFFO15130 113 aa11.29□□□□□ -0.6
SIRPA-202ENST00000358771 NIT1Q86X76 327 aa11.29□□□□□ -0.6
SIRPA-202ENST00000358771 THAP8Q8NA92 274 aa11.29□□□□□ -0.6
SIRPA-202ENST00000358771 C18orf15Q96N68 181 aa11.29□□□□□ -0.6
SIRPA-202ENST00000358771 IGKV1-17P01599 117 aa11.29□□□□□ -0.6
SIRPA-202ENST00000358771 SHANK2-AS3Q9BTD1 123 aa11.29□□□□□ -0.6
SIRPA-202ENST00000358771 NDUFAF3Q9BU61 184 aa11.29□□□□□ -0.6
SIRPA-202ENST00000358771 H3BUX3 64 aa11.29□□□□□ -0.6
SIRPA-202ENST00000358771 MGPP08493 103 aa11.29□□□□□ -0.6
SIRPA-202ENST00000358771 LINC00574Q9H8X3 128 aa11.29□□□□□ -0.6
SIRPA-202ENST00000358771 YPEL3P61236 119 aaPredicted RBP11.28□□□□□ -0.6
SIRPA-202ENST00000358771 MINOS1Q5TGZ0 78 aa11.28□□□□□ -0.6
SIRPA-202ENST00000358771 WFDC12Q8WWY7 111 aa11.28□□□□□ -0.6
SIRPA-202ENST00000358771 C1orf159Q96HA4 380 aa11.28□□□□□ -0.6
SIRPA-202ENST00000358771 RCHY1Q96PM5 261 aa11.28□□□□□ -0.6
SIRPA-202ENST00000358771 MINOS1-NBL1R4GNA1 71 aa11.28□□□□□ -0.6
SIRPA-202ENST00000358771 ZFP36P26651 326 aaKnown RBP11.28□□□□□ -0.6
SIRPA-202ENST00000358771 HIST1H1AQ02539 215 aaPredicted RBP11.28□□□□□ -0.6
SIRPA-202ENST00000358771 Q86TA4 180 aa11.28□□□□□ -0.6
SIRPA-202ENST00000358771 YPEL4Q96NS1 127 aa11.28□□□□□ -0.6
SIRPA-202ENST00000358771 ZMAT5Q9UDW3 170 aaKnown RBP11.28□□□□□ -0.6
SIRPA-202ENST00000358771 HSPB8Q9UJY1 196 aa11.28□□□□□ -0.6
SIRPA-202ENST00000358771 TOMM40O96008 361 aa11.28□□□□□ -0.6
SIRPA-202ENST00000358771 GPX1P07203 203 aa11.28□□□□□ -0.6
SIRPA-202ENST00000358771 COX6B1P14854 86 aa11.28□□□□□ -0.6
SIRPA-202ENST00000358771 BTF3P20290 206 aaKnown RBP11.28□□□□□ -0.6
SIRPA-202ENST00000358771 TMEM70Q9BUB7 260 aa11.28□□□□□ -0.6
SIRPA-202ENST00000358771 PRDM13Q9H4Q3 707 aa11.28□□□□□ -0.6
SIRPA-202ENST00000358771 MTORP42345 2549 aa11.28□□□□□ -0.6
SIRPA-202ENST00000358771 A6NNC1 897 aa11.27□□□□□ -0.6
SIRPA-202ENST00000358771 TM4SF20Q53R12 229 aa11.27□□□□□ -0.6
SIRPA-202ENST00000358771 ZNF491Q8N8L2 437 aa11.27□□□□□ -0.6
SIRPA-202ENST00000358771 DUX5Q96PT3 197 aa11.27□□□□□ -0.6
SIRPA-202ENST00000358771 ZFP30Q9Y2G7 519 aa11.27□□□□□ -0.6
SIRPA-202ENST00000358771 IGKV1D-37A0A075B6S9 117 aa11.27□□□□□ -0.61
SIRPA-202ENST00000358771 ARMS2P0C7Q2 107 aa11.27□□□□□ -0.61
SIRPA-202ENST00000358771 SMIM17P0DL12 118 aa11.27□□□□□ -0.61
SIRPA-202ENST00000358771 ZNF841Q6ZN19 808 aa11.27□□□□□ -0.61
SIRPA-202ENST00000358771 Q6ZWC4 215 aa11.27□□□□□ -0.61
SIRPA-202ENST00000358771 RNF182Q8N6D2 247 aa11.27□□□□□ -0.61
SIRPA-202ENST00000358771 C3orf79P0CE67 100 aa11.27□□□□□ -0.61
SIRPA-202ENST00000358771 C8orf31Q8N9H6 132 aa11.27□□□□□ -0.61
SIRPA-202ENST00000358771 KLK15Q9H2R5 256 aa11.27□□□□□ -0.61
SIRPA-202ENST00000358771 K7EIM0 57 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 HLA-DMBP28068 263 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 TRBV19A0A075B6N1 114 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 OR4C46A6NHA9 309 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 TEX22C9J3V5 150 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 M0R381 172 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 LCNL1Q6ZST4 164 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 FER1L6-AS1Q8NA97 138 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 PRELID3AQ96N28 172 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 C8orf49Q96NF6 230 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 UQCR10Q9UDW1 63 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 A0A1W2PS18 150 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 NCR2O95944 276 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 OR10J6PQ8NGY7 276 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 TRAV41A0A0B4J266 112 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 LINC00614P0C842 121 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 ERCC8Q13216 396 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 OR10J3Q5JRS4 329 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 C18orf32Q8TCD1 76 aa11.26□□□□□ -0.61
SIRPA-202ENST00000358771 RPLP1P05386 114 aaKnown RBP11.25□□□□□ -0.61
SIRPA-202ENST00000358771 LYZL1Q6UWQ5 148 aa11.25□□□□□ -0.61
SIRPA-202ENST00000358771 PSG3Q16557 428 aa11.25□□□□□ -0.61
SIRPA-202ENST00000358771 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.25□□□□□ -0.61
SIRPA-202ENST00000358771 POLR3KQ9Y2Y1 108 aaPredicted RBP11.25□□□□□ -0.61
SIRPA-202ENST00000358771 IGHV2-70DA0A0C4DH43 119 aa11.25□□□□□ -0.61
SIRPA-202ENST00000358771 I3L2K1 104 aa11.25□□□□□ -0.61
SIRPA-202ENST00000358771 FCN3O75636 299 aa11.25□□□□□ -0.61
SIRPA-202ENST00000358771 NMUP48645 174 aa11.25□□□□□ -0.61
SIRPA-202ENST00000358771 UBE2E1P51965 193 aa11.25□□□□□ -0.61
SIRPA-202ENST00000358771 FBLN7Q53RD9 439 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms