RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 SLURP1P55000 103 aa13.83□□□□□ -0.2
SMARCD3-202ENST00000356800 SYNJ2BPP57105 145 aa13.83□□□□□ -0.2
SMARCD3-202ENST00000356800 PDE6HQ13956 83 aa13.83□□□□□ -0.2
SMARCD3-202ENST00000356800 RHEBQ15382 184 aa13.83□□□□□ -0.2
SMARCD3-202ENST00000356800 TMEM241Q24JQ0 296 aa13.83□□□□□ -0.2
SMARCD3-202ENST00000356800 AWAT1Q58HT5 328 aa13.83□□□□□ -0.2
SMARCD3-202ENST00000356800 OR8I2Q8N0Y5 310 aa13.83□□□□□ -0.2
SMARCD3-202ENST00000356800 OR1N2Q8NGR9 330 aa13.83□□□□□ -0.2
SMARCD3-202ENST00000356800 GPR82Q96P67 336 aa13.83□□□□□ -0.2
SMARCD3-202ENST00000356800 DAZ1Q9NQZ3 744 aaKnown RBP13.83□□□□□ -0.2
SMARCD3-202ENST00000356800 SMAD5-AS1Q9Y6J3 95 aa13.83□□□□□ -0.2
SMARCD3-202ENST00000356800 ADARB2-AS1A8MUL3 147 aa13.82□□□□□ -0.2
SMARCD3-202ENST00000356800 LINC01619G3V211 115 aa13.82□□□□□ -0.2
SMARCD3-202ENST00000356800 K7EMT4 169 aa13.82□□□□□ -0.2
SMARCD3-202ENST00000356800 KLF5Q13887 457 aaPredicted RBP13.82□□□□□ -0.2
SMARCD3-202ENST00000356800 REC114Q7Z4M0 266 aa13.82□□□□□ -0.2
SMARCD3-202ENST00000356800 LYPD1Q8N2G4 141 aa13.82□□□□□ -0.2
SMARCD3-202ENST00000356800 RAX2Q96IS3 184 aa13.82□□□□□ -0.2
SMARCD3-202ENST00000356800 C17orf77Q96MU5 243 aa13.82□□□□□ -0.2
SMARCD3-202ENST00000356800 DERL1Q9BUN8 251 aa13.82□□□□□ -0.2
SMARCD3-202ENST00000356800 A0A1B0GUS0 222 aa13.82□□□□□ -0.2
SMARCD3-202ENST00000356800 C2CD4CQ8TF44 421 aa13.82□□□□□ -0.2
SMARCD3-202ENST00000356800 Q9H3A6 140 aa13.82□□□□□ -0.2
SMARCD3-202ENST00000356800 OTORQ9NRC9 128 aa13.82□□□□□ -0.2
SMARCD3-202ENST00000356800 IGHV7-4-1A0A0J9YVY3 117 aa13.81□□□□□ -0.2
SMARCD3-202ENST00000356800 TMEM213A2RRL7 107 aa13.81□□□□□ -0.2
SMARCD3-202ENST00000356800 C7orf77A4D0Y5 90 aa13.81□□□□□ -0.2
SMARCD3-202ENST00000356800 LGALS9O00182 355 aa13.81□□□□□ -0.2
SMARCD3-202ENST00000356800 C16orf54Q6UWD8 224 aa13.81□□□□□ -0.2
SMARCD3-202ENST00000356800 C1QL4Q86Z23 238 aa13.81□□□□□ -0.2
SMARCD3-202ENST00000356800 GLMPQ8WWB7 406 aa13.81□□□□□ -0.2
SMARCD3-202ENST00000356800 HIST1H2BAQ96A08 127 aa13.81□□□□□ -0.2
SMARCD3-202ENST00000356800 UFC1Q9Y3C8 167 aa13.81□□□□□ -0.2
SMARCD3-202ENST00000356800 PGPA6NDG6 321 aa13.8□□□□□ -0.2
SMARCD3-202ENST00000356800 A8MWP6 167 aa13.8□□□□□ -0.2
SMARCD3-202ENST00000356800 B4DEV8 164 aa13.8□□□□□ -0.2
SMARCD3-202ENST00000356800 DPF1Q92782 380 aa13.8□□□□□ -0.2
SMARCD3-202ENST00000356800 EPDR1Q9UM22 224 aa13.8□□□□□ -0.2
SMARCD3-202ENST00000356800 ZNF253O75346 499 aa13.79□□□□□ -0.2
SMARCD3-202ENST00000356800 RPL35P42766 123 aaKnown RBP13.79□□□□□ -0.2
SMARCD3-202ENST00000356800 BTN1A1Q13410 526 aa13.79□□□□□ -0.2
SMARCD3-202ENST00000356800 FHL3Q13643 280 aa13.79□□□□□ -0.2
SMARCD3-202ENST00000356800 SIGLEC15Q6ZMC9 328 aa13.79□□□□□ -0.2
SMARCD3-202ENST00000356800 C5orf17Q8NAS9 161 aa13.79□□□□□ -0.2
SMARCD3-202ENST00000356800 SMPXQ9UHP9 88 aa13.79□□□□□ -0.2
SMARCD3-202ENST00000356800 A0A087X0K7 114 aa13.79□□□□□ -0.2
SMARCD3-202ENST00000356800 C9JCJ5 164 aa13.79□□□□□ -0.2
SMARCD3-202ENST00000356800 SLC17A3O00476 420 aa13.79□□□□□ -0.2
SMARCD3-202ENST00000356800 PEX7O00628 323 aa13.79□□□□□ -0.2
SMARCD3-202ENST00000356800 CHEK1O14757 476 aa13.79□□□□□ -0.2
SMARCD3-202ENST00000356800 FOXL1Q12952 345 aa13.79□□□□□ -0.2
SMARCD3-202ENST00000356800 RHPN1-AS1Q9BWJ2 59 aa13.79□□□□□ -0.2
SMARCD3-202ENST00000356800 TRBV20OR9-2A0A075B6H5 130 aa13.78□□□□□ -0.2
SMARCD3-202ENST00000356800 HELTA6NFD8 242 aa13.78□□□□□ -0.2
SMARCD3-202ENST00000356800 SLC25A5P05141 298 aaKnown RBP13.78□□□□□ -0.2
SMARCD3-202ENST00000356800 GALR1P47211 349 aa13.78□□□□□ -0.2
SMARCD3-202ENST00000356800 RPL23P62829 140 aaKnown RBP13.78□□□□□ -0.2
SMARCD3-202ENST00000356800 PRIMA1Q86XR5 153 aa13.78□□□□□ -0.2
SMARCD3-202ENST00000356800 DLX4Q92988 240 aaPredicted RBP13.78□□□□□ -0.2
SMARCD3-202ENST00000356800 RPS10P5Q9NQ39 176 aa13.78□□□□□ -0.2
SMARCD3-202ENST00000356800 LY96Q9Y6Y9 160 aa13.78□□□□□ -0.2
SMARCD3-202ENST00000356800 TENM1Q9UKZ4 2725 aa13.78□□□□□ -0.2
SMARCD3-202ENST00000356800 A0A087WWC5 75 aa13.77□□□□□ -0.21
SMARCD3-202ENST00000356800 CCL24O00175 119 aa13.77□□□□□ -0.21
SMARCD3-202ENST00000356800 ATF4P18848 351 aaPredicted RBP13.77□□□□□ -0.21
SMARCD3-202ENST00000356800 MEOX2P50222 304 aa13.77□□□□□ -0.21
SMARCD3-202ENST00000356800 PSG9Q00887 426 aa13.77□□□□□ -0.21
SMARCD3-202ENST00000356800 ATG101Q9BSB4 218 aa13.77□□□□□ -0.21
SMARCD3-202ENST00000356800 WNK1Q9H4A3 2382 aa13.76□□□□□ -0.21
SMARCD3-202ENST00000356800 A0A1W2PS18 150 aa13.76□□□□□ -0.21
SMARCD3-202ENST00000356800 C2orf70A6NJV1 201 aa13.76□□□□□ -0.21
SMARCD3-202ENST00000356800 DNASE2O00115 360 aaPredicted RBP13.76□□□□□ -0.21
SMARCD3-202ENST00000356800 TAS2R60P59551 318 aa13.76□□□□□ -0.21
SMARCD3-202ENST00000356800 NSUN5P1Q3KNT7 163 aa13.76□□□□□ -0.21
SMARCD3-202ENST00000356800 KRTAP24-1Q3LI83 254 aa13.76□□□□□ -0.21
SMARCD3-202ENST00000356800 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.76□□□□□ -0.21
SMARCD3-202ENST00000356800 ADAMTSL5Q6ZMM2 481 aa13.76□□□□□ -0.21
SMARCD3-202ENST00000356800 LINC01551Q86U37 167 aa13.76□□□□□ -0.21
SMARCD3-202ENST00000356800 EXOC3-AS1Q8N2X6 119 aa13.76□□□□□ -0.21
SMARCD3-202ENST00000356800 SELENOKQ9Y6D0 94 aa13.76□□□□□ -0.21
SMARCD3-202ENST00000356800 TCRAP04437 139 aa13.75□□□□□ -0.21
SMARCD3-202ENST00000356800 AKR1C3P42330 323 aa13.75□□□□□ -0.21
SMARCD3-202ENST00000356800 CNN1P51911 297 aaKnown RBP13.75□□□□□ -0.21
SMARCD3-202ENST00000356800 ADIRFQ15847 76 aa13.75□□□□□ -0.21
SMARCD3-202ENST00000356800 CMTM2Q8TAZ6 248 aa13.75□□□□□ -0.21
SMARCD3-202ENST00000356800 GRAMD2BQ96HH9 432 aa13.75□□□□□ -0.21
SMARCD3-202ENST00000356800 KLF12Q9Y4X4 402 aa13.75□□□□□ -0.21
SMARCD3-202ENST00000356800 ZNF785A8K8V0 405 aa13.75□□□□□ -0.21
SMARCD3-202ENST00000356800 CBLN1P23435 193 aa13.75□□□□□ -0.21
SMARCD3-202ENST00000356800 GNG5P63218 68 aa13.75□□□□□ -0.21
SMARCD3-202ENST00000356800 NDUFA11Q86Y39 141 aa13.75□□□□□ -0.21
SMARCD3-202ENST00000356800 AAMDCQ9H7C9 122 aa13.75□□□□□ -0.21
SMARCD3-202ENST00000356800 SMCO4Q9NRQ5 59 aa13.75□□□□□ -0.21
SMARCD3-202ENST00000356800 PRELID1Q9Y255 219 aa13.75□□□□□ -0.21
SMARCD3-202ENST00000356800 ATRQ13535 2644 aa13.74□□□□□ -0.21
SMARCD3-202ENST00000356800 TSPAN4O14817 238 aa13.74□□□□□ -0.21
SMARCD3-202ENST00000356800 S100A9P06702 114 aaKnown RBP13.74□□□□□ -0.21
SMARCD3-202ENST00000356800 GNG4P50150 75 aa13.74□□□□□ -0.21
SMARCD3-202ENST00000356800 TMEM183BQ1AE95 376 aa13.74□□□□□ -0.21
SMARCD3-202ENST00000356800 CENPWQ5EE01 88 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms