RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 RPP25LQ8N5L8 163 aaKnown RBP11.9□□□□□ -0.5
FDPS-201ENST00000356657 LRRC20Q8TCA0 184 aa11.9□□□□□ -0.5
FDPS-201ENST00000356657 PAXXQ9BUH6 204 aa11.9□□□□□ -0.5
FDPS-201ENST00000356657 RPRMQ9NS64 109 aa11.9□□□□□ -0.5
FDPS-201ENST00000356657 TRAV5A0A0B4J249 113 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 ZNF688P0C7X2 276 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 IGHV4-30-4P0DP06 118 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 RAB5CP51148 216 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 FAM122CQ6P4D5 195 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 PHYHIPLQ96FC7 376 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 TUBA4BQ9H853 241 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 TRBV19A0A075B6N1 114 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 CTXND1A0A1B0GTU2 59 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 STAG3L2P0CL84 134 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 STAG3L3P0CL85 134 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 DEFB131AP59861 70 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 PSG9Q00887 426 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 PSMG4Q5JS54 123 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 RAB24Q969Q5 203 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 C17orf77Q96MU5 243 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 ZNF331Q9NQX6 463 aaPredicted RBP11.89□□□□□ -0.51
FDPS-201ENST00000356657 RFNGQ9Y644 331 aa11.89□□□□□ -0.51
FDPS-201ENST00000356657 NBEAP1P0C6P0 100 aa11.88□□□□□ -0.51
FDPS-201ENST00000356657 UBE2L3P68036 154 aaKnown RBP11.88□□□□□ -0.51
FDPS-201ENST00000356657 LYPD1Q8N2G4 141 aa11.88□□□□□ -0.51
FDPS-201ENST00000356657 FAM24BQ8N5W8 94 aa11.88□□□□□ -0.51
FDPS-201ENST00000356657 RNF141Q8WVD5 230 aa11.88□□□□□ -0.51
FDPS-201ENST00000356657 SAT2Q96F10 170 aaPredicted RBP11.88□□□□□ -0.51
FDPS-201ENST00000356657 SRD5A3Q9H8P0 318 aa11.88□□□□□ -0.51
FDPS-201ENST00000356657 UBQLN2Q9UHD9 624 aa11.88□□□□□ -0.51
FDPS-201ENST00000356657 H3BQ15 152 aa11.87□□□□□ -0.51
FDPS-201ENST00000356657 CXorf1O96002 111 aa11.87□□□□□ -0.51
FDPS-201ENST00000356657 FOXI2Q6ZQN5 318 aa11.87□□□□□ -0.51
FDPS-201ENST00000356657 DEFB125Q8N687 156 aa11.87□□□□□ -0.51
FDPS-201ENST00000356657 FXYD5Q96DB9 178 aa11.87□□□□□ -0.51
FDPS-201ENST00000356657 MRPL53Q96EL3 112 aaKnown RBP11.87□□□□□ -0.51
FDPS-201ENST00000356657 AAMDCQ9H7C9 122 aa11.87□□□□□ -0.51
FDPS-201ENST00000356657 ZNF586Q9NXT0 402 aa11.87□□□□□ -0.51
FDPS-201ENST00000356657 PRELID1Q9Y255 219 aa11.87□□□□□ -0.51
FDPS-201ENST00000356657 PYYP10082 97 aa11.86□□□□□ -0.51
FDPS-201ENST00000356657 DEFB121Q5J5C9 76 aa11.86□□□□□ -0.51
FDPS-201ENST00000356657 TMED6Q8WW62 240 aa11.86□□□□□ -0.51
FDPS-201ENST00000356657 CLUHP3Q96NS8 147 aa11.86□□□□□ -0.51
FDPS-201ENST00000356657 TMEM167BQ9NRX6 74 aa11.86□□□□□ -0.51
FDPS-201ENST00000356657 KIR2DL5BA0A0G2JN68 375 aa11.85□□□□□ -0.51
FDPS-201ENST00000356657 KIR2DL5BA0A0G2JPC4 375 aa11.85□□□□□ -0.51
FDPS-201ENST00000356657 ARL14EPLP0DKL9 152 aa11.85□□□□□ -0.51
FDPS-201ENST00000356657 PSG3Q16557 428 aa11.85□□□□□ -0.51
FDPS-201ENST00000356657 KIR2DL5AQ8N109 375 aa11.85□□□□□ -0.51
FDPS-201ENST00000356657 KIR2DL5BQ8NHK3 375 aa11.85□□□□□ -0.51
FDPS-201ENST00000356657 LINC00052Q96N35 136 aa11.85□□□□□ -0.51
FDPS-201ENST00000356657 PRKDCP78527 4128 aaKnown RBP11.85□□□□□ -0.51
FDPS-201ENST00000356657 LOC102724200A0A096LPH7 203 aaPredicted RBP11.84□□□□□ -0.51
FDPS-201ENST00000356657 TRAV8-2A0A0B4J237 113 aa11.84□□□□□ -0.51
FDPS-201ENST00000356657 OR10J4P0C629 311 aa11.84□□□□□ -0.51
FDPS-201ENST00000356657 FRMD6-AS1P0C7T7 363 aa11.84□□□□□ -0.51
FDPS-201ENST00000356657 HLA-DRB4P13762 266 aa11.84□□□□□ -0.51
FDPS-201ENST00000356657 APOC4P55056 127 aa11.84□□□□□ -0.51
FDPS-201ENST00000356657 EBLN2Q6P2I7 272 aa11.84□□□□□ -0.51
FDPS-201ENST00000356657 APRG1Q8IVJ8 170 aa11.84□□□□□ -0.51
FDPS-201ENST00000356657 STHQ8IWL8 128 aa11.84□□□□□ -0.51
FDPS-201ENST00000356657 SUN5Q8TC36 379 aa11.84□□□□□ -0.51
FDPS-201ENST00000356657 ZNF503Q96F45 646 aa11.84□□□□□ -0.51
FDPS-201ENST00000356657 B9D2Q9BPU9 175 aa11.84□□□□□ -0.51
FDPS-201ENST00000356657 WFDC10AQ9H1F0 79 aa11.84□□□□□ -0.51
FDPS-201ENST00000356657 SAV1Q9H4B6 383 aaPredicted RBP11.84□□□□□ -0.51
FDPS-201ENST00000356657 HLA-DRB4X5D2U9 266 aa11.84□□□□□ -0.51
FDPS-201ENST00000356657 NKX2-5P52952 324 aaPredicted RBP11.83□□□□□ -0.52
FDPS-201ENST00000356657 FAM74A1Q5RGS3 127 aa11.83□□□□□ -0.52
FDPS-201ENST00000356657 LINC00322Q6ZN03 302 aaPredicted RBP11.83□□□□□ -0.52
FDPS-201ENST00000356657 ARL6IP6Q8N6S5 226 aa11.83□□□□□ -0.52
FDPS-201ENST00000356657 ZNF738Q8NE65 137 aa11.83□□□□□ -0.52
FDPS-201ENST00000356657 MAP1LC3B2A6NCE7 125 aa11.83□□□□□ -0.52
FDPS-201ENST00000356657 TEX46H3BTG2 121 aa11.83□□□□□ -0.52
FDPS-201ENST00000356657 SLC17A3O00476 420 aa11.83□□□□□ -0.52
FDPS-201ENST00000356657 DUSP14O95147 198 aaKnown RBP11.83□□□□□ -0.52
FDPS-201ENST00000356657 NDUFB4O95168 129 aa11.83□□□□□ -0.52
FDPS-201ENST00000356657 GCHFRP30047 84 aa11.83□□□□□ -0.52
FDPS-201ENST00000356657 SULT1A2P50226 295 aa11.83□□□□□ -0.52
FDPS-201ENST00000356657 NUTF2P61970 127 aaKnown RBP11.83□□□□□ -0.52
FDPS-201ENST00000356657 BLNKQ8WV28 456 aa11.83□□□□□ -0.52
FDPS-201ENST00000356657 CITED4Q96RK1 184 aa11.83□□□□□ -0.52
FDPS-201ENST00000356657 MAP1LC3BQ9GZQ8 125 aa11.83□□□□□ -0.52
FDPS-201ENST00000356657 AGRNO00468 2067 aa11.82□□□□□ -0.52
FDPS-201ENST00000356657 UBE2CO00762 179 aa11.82□□□□□ -0.52
FDPS-201ENST00000356657 ZNF726P1Q15940 193 aa11.82□□□□□ -0.52
FDPS-201ENST00000356657 ACTL10Q5JWF8 245 aa11.82□□□□□ -0.52
FDPS-201ENST00000356657 MORN3Q6PF18 240 aaPredicted RBP11.82□□□□□ -0.52
FDPS-201ENST00000356657 TRPT1Q86TN4 253 aaKnown RBP11.82□□□□□ -0.52
FDPS-201ENST00000356657 FAM213BQ8TBF2 198 aa11.82□□□□□ -0.52
FDPS-201ENST00000356657 MBD3L1Q8WWY6 194 aa11.82□□□□□ -0.52
FDPS-201ENST00000356657 RPUSD4Q96CM3 377 aaKnown RBP11.82□□□□□ -0.52
FDPS-201ENST00000356657 NKX6-2Q9C056 277 aaPredicted RBP11.82□□□□□ -0.52
FDPS-201ENST00000356657 ARL2-SNX15V9GYD0 113 aa11.82□□□□□ -0.52
FDPS-201ENST00000356657 A0A0J9YX75 114 aa11.81□□□□□ -0.52
FDPS-201ENST00000356657 H3BMM0 161 aa11.81□□□□□ -0.52
FDPS-201ENST00000356657 H2AFB1P0C5Y9 115 aa11.81□□□□□ -0.52
FDPS-201ENST00000356657 RNF182Q8N6D2 247 aa11.81□□□□□ -0.52
FDPS-201ENST00000356657 RXFP4Q8TDU9 374 aa11.81□□□□□ -0.52
FDPS-201ENST00000356657 C20orf173Q96LM9 149 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms