RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 RHEBQ15382 184 aa5.34□□□□□ -1.55
VPS13A-201ENST00000355766 SOHLH1Q5JUK2 328 aa5.34□□□□□ -1.55
VPS13A-201ENST00000355766 C10orf113Q5VZT2 155 aa5.34□□□□□ -1.55
VPS13A-201ENST00000355766 LCN15Q6UWW0 184 aa5.34□□□□□ -1.55
VPS13A-201ENST00000355766 OR51G1Q8NGK1 321 aa5.34□□□□□ -1.55
VPS13A-201ENST00000355766 RPUSD4Q96CM3 377 aaKnown RBP5.34□□□□□ -1.55
VPS13A-201ENST00000355766 HSPB9Q9BQS6 159 aa5.34□□□□□ -1.55
VPS13A-201ENST00000355766 TMEM14CQ9P0S9 112 aa5.34□□□□□ -1.55
VPS13A-201ENST00000355766 GNG13Q9P2W3 67 aa5.34□□□□□ -1.55
VPS13A-201ENST00000355766 A0A0G2JLM5 398 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 B4DEV8 164 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 GNG7O60262 68 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 APOC3P02656 99 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 SRP19P09132 144 aaKnown RBP5.33□□□□□ -1.56
VPS13A-201ENST00000355766 RD3LP0DJH9 198 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 ARL14EPLP0DKL9 152 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 CD24P25063 80 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 GCHFRP30047 84 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 MEOX2P50222 304 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 RELQ04864 619 aaPredicted RBP5.33□□□□□ -1.56
VPS13A-201ENST00000355766 FAM78BQ5VT40 261 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 UNQ5815/PRO19632Q6UWF5 114 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 SSX7Q7RTT5 188 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 ARL6IP6Q8N6S5 226 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 ZNF502Q8TBZ5 544 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 TMEM37Q8WXS4 190 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 C11orf52Q96A22 123 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 EEF1AKMT3Q96AZ1 226 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 NIPSNAP3BQ9BS92 247 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 SEPSECSQ9HD40 501 aaKnown RBP5.33□□□□□ -1.56
VPS13A-201ENST00000355766 DOK5Q9P104 306 aa5.33□□□□□ -1.56
VPS13A-201ENST00000355766 HUWE1Q7Z6Z7 4374 aaKnown RBP5.32□□□□□ -1.56
VPS13A-201ENST00000355766 A0A087WWC5 75 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 C11orf94C9JXX5 98 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 NUPL2O15504 423 aaKnown RBP5.32□□□□□ -1.56
VPS13A-201ENST00000355766 PSG1P11464 419 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 PPIFP30405 207 aaKnown RBP5.32□□□□□ -1.56
VPS13A-201ENST00000355766 CCL20P78556 96 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 RHOGP84095 191 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 CFHR3Q02985 330 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 PDE6HQ13956 83 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 HAGHQ16775 308 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 ECSCRQ19T08 205 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 C15orf32Q32M92 178 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 GCSAMLQ5JQS6 135 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 ZNF600Q6ZNG1 722 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 Q8WTZ3 238 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 RNF125Q96EQ8 232 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 FAM167A-AS1Q96KT0 104 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 GPR82Q96P67 336 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 UHRF2Q96PU4 802 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 SHANK2-AS3Q9BTD1 123 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 FAM103A1Q9BTL3 118 aaKnown RBP5.32□□□□□ -1.56
VPS13A-201ENST00000355766 MRPL36Q9P0J6 103 aaKnown RBP5.32□□□□□ -1.56
VPS13A-201ENST00000355766 MRPL27Q9P0M9 148 aaKnown RBP5.32□□□□□ -1.56
VPS13A-201ENST00000355766 HIGD1AQ9Y241 93 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 RFNGQ9Y644 331 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 LY96Q9Y6Y9 160 aa5.32□□□□□ -1.56
VPS13A-201ENST00000355766 CXorf65A6NEN9 183 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 C9JQL5 133 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 H3BRN7 92 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 BMPR1BO00238 502 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 IGHG4P01861 327 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 FGF8P55075 233 aaPredicted RBP5.31□□□□□ -1.56
VPS13A-201ENST00000355766 CD81P60033 236 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 UBE2L3P68036 154 aaKnown RBP5.31□□□□□ -1.56
VPS13A-201ENST00000355766 ZNF90Q03938 601 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 CD300EQ496F6 205 aaPredicted RBP5.31□□□□□ -1.56
VPS13A-201ENST00000355766 C1orf194Q5T5A4 169 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 FAM90A2PQ658T7 463 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 MIR17HGQ75NE6 70 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 LINC00305Q7Z4B0 112 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 TMEM219Q86XT9 240 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 LYPD1Q8N2G4 141 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 RNF152Q8N8N0 203 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 CYB561D1Q8N8Q1 229 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 SMIM12Q96EX1 92 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 SLC25A2Q9BXI2 301 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 PRSS22Q9GZN4 317 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 TUBA4BQ9H853 241 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 ZNF355PQ9NSJ1 428 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 TMEM242Q9NWH2 141 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 CSMD3Q7Z407 3707 aa5.31□□□□□ -1.56
VPS13A-201ENST00000355766 FBLL1A6NHQ2 334 aaKnown RBP5.3□□□□□ -1.56
VPS13A-201ENST00000355766 FAM74A7A6NL05 159 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 C9JCJ5 164 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 TGOLN2O43493 480 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 OR7C2O60412 319 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 PAGE4O60829 102 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 ZNF253O75346 499 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 OR2J3O76001 311 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 S100A9P06702 114 aaKnown RBP5.3□□□□□ -1.56
VPS13A-201ENST00000355766 CTSGP08311 255 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 APELAP0DMC3 54 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 GP9P14770 177 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 RPL7P18124 248 aaKnown RBP5.3□□□□□ -1.56
VPS13A-201ENST00000355766 SLC35B1P78383 322 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 DEFA5Q01523 94 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 ATP5G2Q06055 141 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 TMEM95Q3KNT9 176 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms