RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 KLHL30-AS1Q8NEE0 82 aa10.42□□□□□ -0.74
HOXA1-202ENST00000355633 DAZ1Q9NQZ3 744 aaKnown RBP10.42□□□□□ -0.74
HOXA1-202ENST00000355633 K7EMT4 169 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 GALR1P47211 349 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 PDE6HQ13956 83 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 WFDC12Q8WWY7 111 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 DERL1Q9BUN8 251 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 UFC1Q9Y3C8 167 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 SMAD5-AS1Q9Y6J3 95 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 A0A1W2PS18 150 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 SLC25A5P05141 298 aaKnown RBP10.41□□□□□ -0.74
HOXA1-202ENST00000355633 SMIM6P0DI80 62 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 CD28P10747 220 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 HOXD3P31249 432 aaPredicted RBP10.41□□□□□ -0.74
HOXA1-202ENST00000355633 DEFB136Q30KP8 78 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 TM4SF20Q53R12 229 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 ATRAIDQ6UW56 229 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 C16orf54Q6UWD8 224 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 LYPD1Q8N2G4 141 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 C11orf44Q8N8P7 122 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 TVP23CQ96ET8 276 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 GRAMD2BQ96HH9 432 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 TCEAL7Q9BRU2 100 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 OTORQ9NRC9 128 aa10.41□□□□□ -0.74
HOXA1-202ENST00000355633 IGHV7-4-1A0A0J9YVY3 117 aa10.4□□□□□ -0.74
HOXA1-202ENST00000355633 ZNF785A8K8V0 405 aa10.4□□□□□ -0.74
HOXA1-202ENST00000355633 M0R036 132 aa10.4□□□□□ -0.74
HOXA1-202ENST00000355633 SLC17A3O00476 420 aa10.4□□□□□ -0.74
HOXA1-202ENST00000355633 HIST2H2BDQ6DRA6 164 aa10.4□□□□□ -0.74
HOXA1-202ENST00000355633 SIGLEC15Q6ZMC9 328 aa10.4□□□□□ -0.74
HOXA1-202ENST00000355633 EXOC3-AS1Q8N2X6 119 aa10.4□□□□□ -0.74
HOXA1-202ENST00000355633 C5orf17Q8NAS9 161 aa10.4□□□□□ -0.74
HOXA1-202ENST00000355633 MLXQ9UH92 298 aa10.4□□□□□ -0.74
HOXA1-202ENST00000355633 NAT8Q9UHE5 227 aa10.4□□□□□ -0.74
HOXA1-202ENST00000355633 A0A087X0K7 114 aa10.4□□□□□ -0.75
HOXA1-202ENST00000355633 LINC01619G3V211 115 aa10.4□□□□□ -0.75
HOXA1-202ENST00000355633 SYNJ2BPP57105 145 aa10.4□□□□□ -0.75
HOXA1-202ENST00000355633 PROK1P58294 105 aa10.4□□□□□ -0.75
HOXA1-202ENST00000355633 TMEM241Q24JQ0 296 aa10.4□□□□□ -0.75
HOXA1-202ENST00000355633 REC114Q7Z4M0 266 aa10.4□□□□□ -0.75
HOXA1-202ENST00000355633 OR11H1Q8NG94 326 aa10.4□□□□□ -0.75
HOXA1-202ENST00000355633 C2CD4CQ8TF44 421 aa10.4□□□□□ -0.75
HOXA1-202ENST00000355633 GLMPQ8WWB7 406 aa10.4□□□□□ -0.75
HOXA1-202ENST00000355633 DPF1Q92782 380 aa10.4□□□□□ -0.75
HOXA1-202ENST00000355633 EPDR1Q9UM22 224 aa10.4□□□□□ -0.75
HOXA1-202ENST00000355633 NSD1Q96L73 2696 aaPredicted RBP10.39□□□□□ -0.75
HOXA1-202ENST00000355633 F8P00451 2351 aa10.39□□□□□ -0.75
HOXA1-202ENST00000355633 LGALS9O00182 355 aa10.39□□□□□ -0.75
HOXA1-202ENST00000355633 PEX7O00628 323 aa10.39□□□□□ -0.75
HOXA1-202ENST00000355633 GNG5P63218 68 aa10.39□□□□□ -0.75
HOXA1-202ENST00000355633 PSG9Q00887 426 aa10.39□□□□□ -0.75
HOXA1-202ENST00000355633 PNRC1Q12796 327 aaPredicted RBP10.39□□□□□ -0.75
HOXA1-202ENST00000355633 AWAT1Q58HT5 328 aa10.39□□□□□ -0.75
HOXA1-202ENST00000355633 C1QL4Q86Z23 238 aa10.39□□□□□ -0.75
HOXA1-202ENST00000355633 CMTM2Q8TAZ6 248 aa10.39□□□□□ -0.75
HOXA1-202ENST00000355633 HIST1H2BAQ96A08 127 aa10.39□□□□□ -0.75
HOXA1-202ENST00000355633 RHPN1-AS1Q9BWJ2 59 aa10.39□□□□□ -0.75
HOXA1-202ENST00000355633 AAMDCQ9H7C9 122 aa10.39□□□□□ -0.75
HOXA1-202ENST00000355633 SDF2L1Q9HCN8 221 aa10.39□□□□□ -0.75
HOXA1-202ENST00000355633 RPH3ALQ9UNE2 315 aa10.39□□□□□ -0.75
HOXA1-202ENST00000355633 A8MWP6 167 aa10.38□□□□□ -0.75
HOXA1-202ENST00000355633 ZNF253O75346 499 aa10.38□□□□□ -0.75
HOXA1-202ENST00000355633 AKR1C3P42330 323 aa10.38□□□□□ -0.75
HOXA1-202ENST00000355633 C8orf86Q6ZUL3 223 aa10.38□□□□□ -0.75
HOXA1-202ENST00000355633 OR1N2Q8NGR9 330 aa10.38□□□□□ -0.75
HOXA1-202ENST00000355633 CITED2Q99967 270 aaPredicted RBP10.38□□□□□ -0.75
HOXA1-202ENST00000355633 SMPXQ9UHP9 88 aa10.38□□□□□ -0.75
HOXA1-202ENST00000355633 TSSC4Q9Y5U2 329 aaPredicted RBP10.38□□□□□ -0.75
HOXA1-202ENST00000355633 TMEM213A2RRL7 107 aa10.38□□□□□ -0.75
HOXA1-202ENST00000355633 HELTA6NFD8 242 aa10.38□□□□□ -0.75
HOXA1-202ENST00000355633 DNASE2O00115 360 aaPredicted RBP10.38□□□□□ -0.75
HOXA1-202ENST00000355633 CHEK1O14757 476 aa10.38□□□□□ -0.75
HOXA1-202ENST00000355633 S100A8P05109 93 aa10.38□□□□□ -0.75
HOXA1-202ENST00000355633 S100A9P06702 114 aaKnown RBP10.38□□□□□ -0.75
HOXA1-202ENST00000355633 SLURP1P55000 103 aa10.38□□□□□ -0.75
HOXA1-202ENST00000355633 KLF5Q13887 457 aaPredicted RBP10.38□□□□□ -0.75
HOXA1-202ENST00000355633 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.38□□□□□ -0.75
HOXA1-202ENST00000355633 ATG101Q9BSB4 218 aa10.38□□□□□ -0.75
HOXA1-202ENST00000355633 A0A1W2PRX2 142 aa10.37□□□□□ -0.75
HOXA1-202ENST00000355633 EDN2P20800 178 aa10.37□□□□□ -0.75
HOXA1-202ENST00000355633 BMI1P35226 326 aa10.37□□□□□ -0.75
HOXA1-202ENST00000355633 CNN1P51911 297 aaKnown RBP10.37□□□□□ -0.75
HOXA1-202ENST00000355633 DUX3Q96PT4 197 aa10.37□□□□□ -0.75
HOXA1-202ENST00000355633 TRBV20OR9-2A0A075B6H5 130 aa10.36□□□□□ -0.75
HOXA1-202ENST00000355633 C7orf77A4D0Y5 90 aa10.36□□□□□ -0.75
HOXA1-202ENST00000355633 TCRAP04437 139 aa10.36□□□□□ -0.75
HOXA1-202ENST00000355633 S100PP25815 95 aa10.36□□□□□ -0.75
HOXA1-202ENST00000355633 RHEBQ15382 184 aa10.36□□□□□ -0.75
HOXA1-202ENST00000355633 ADIRFQ15847 76 aa10.36□□□□□ -0.75
HOXA1-202ENST00000355633 SLC50A1Q9BRV3 221 aa10.36□□□□□ -0.75
HOXA1-202ENST00000355633 ZNF331Q9NQX6 463 aaPredicted RBP10.36□□□□□ -0.75
HOXA1-202ENST00000355633 C9JCJ5 164 aa10.36□□□□□ -0.75
HOXA1-202ENST00000355633 RPL23P62829 140 aaKnown RBP10.36□□□□□ -0.75
HOXA1-202ENST00000355633 LINC00479Q96M42 142 aa10.36□□□□□ -0.75
HOXA1-202ENST00000355633 RPS10P5Q9NQ39 176 aa10.36□□□□□ -0.75
HOXA1-202ENST00000355633 GSN-AS1Q9NRJ2 163 aa10.36□□□□□ -0.75
HOXA1-202ENST00000355633 A0A1B0GUS0 222 aa10.35□□□□□ -0.75
HOXA1-202ENST00000355633 M0R3E3 92 aa10.35□□□□□ -0.75
HOXA1-202ENST00000355633 TAS2R60P59551 318 aa10.35□□□□□ -0.75
HOXA1-202ENST00000355633 CENPWQ5EE01 88 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms