RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 IL9P15248 144 aa10.4□□□□□ -0.74
COL6A3-203ENST00000353578 C9orf139Q6ZV77 190 aa10.4□□□□□ -0.74
COL6A3-203ENST00000353578 NBR2O15453 112 aa10.4□□□□□ -0.74
COL6A3-203ENST00000353578 CELA3AP09093 270 aa10.4□□□□□ -0.74
COL6A3-203ENST00000353578 DPM3Q9P2X0 92 aa10.4□□□□□ -0.74
COL6A3-203ENST00000353578 LYZL1Q6UWQ5 148 aa10.4□□□□□ -0.74
COL6A3-203ENST00000353578 C1orf210Q8IVY1 113 aa10.4□□□□□ -0.74
COL6A3-203ENST00000353578 IMUPQ9GZP8 106 aa10.4□□□□□ -0.75
COL6A3-203ENST00000353578 RFNGQ9Y644 331 aa10.4□□□□□ -0.75
COL6A3-203ENST00000353578 A0A0J9YW62 118 aa10.39□□□□□ -0.75
COL6A3-203ENST00000353578 B9A039 149 aa10.39□□□□□ -0.75
COL6A3-203ENST00000353578 C12orf74Q32Q52 190 aa10.39□□□□□ -0.75
COL6A3-203ENST00000353578 TMEM219Q86XT9 240 aa10.39□□□□□ -0.75
COL6A3-203ENST00000353578 RNASE8Q8TDE3 154 aaKnown RBP10.39□□□□□ -0.75
COL6A3-203ENST00000353578 A0A0B4J2C4 111 aa10.39□□□□□ -0.75
COL6A3-203ENST00000353578 RHODO00212 210 aa10.39□□□□□ -0.75
COL6A3-203ENST00000353578 IGLV3-32A0A0A0MS00 114 aa10.39□□□□□ -0.75
COL6A3-203ENST00000353578 ERCC8Q13216 396 aa10.39□□□□□ -0.75
COL6A3-203ENST00000353578 VDAC2P45880 294 aaPredicted RBP10.39□□□□□ -0.75
COL6A3-203ENST00000353578 ZNF329Q86UD4 541 aa10.39□□□□□ -0.75
COL6A3-203ENST00000353578 FAM60AQ9NP50 221 aa10.39□□□□□ -0.75
COL6A3-203ENST00000353578 E9PQ18 207 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 NCR2O95944 276 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 IGLC1P0CG04 106 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 TRPT1Q86TN4 253 aaKnown RBP10.38□□□□□ -0.75
COL6A3-203ENST00000353578 RNF186Q9NXI6 227 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 IGKV3-11P04433 115 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 PTCRAQ6ISU1 281 aaPredicted RBP10.38□□□□□ -0.75
COL6A3-203ENST00000353578 ATG2AQ2TAZ0 1938 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 TCF15Q12870 199 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 TTTY12Q9BZ98 90 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 FAM236AA0A1B0GUQ0 79 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 FAM236BA0A1B0GV22 79 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 PEBP1P30086 187 aaKnown RBP10.38□□□□□ -0.75
COL6A3-203ENST00000353578 FOXI1Q12951 378 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 PRR7Q8TB68 274 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 PAQR4Q8N4S7 273 aaPredicted RBP10.38□□□□□ -0.75
COL6A3-203ENST00000353578 ZIC4Q8N9L1 334 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 GFI1Q99684 422 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 ADARB2-AS1A8MUL3 147 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 PTH2Q96A98 100 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 PLA2G3Q9NZ20 509 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 ANAPC10Q9UM13 185 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 V9GYV3 84 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 NDUFB8O95169 186 aa10.38□□□□□ -0.75
COL6A3-203ENST00000353578 SPINK14Q6IE38 97 aa10.37□□□□□ -0.75
COL6A3-203ENST00000353578 C1QL2Q7Z5L3 287 aa10.37□□□□□ -0.75
COL6A3-203ENST00000353578 OOSP1A8MZH6 123 aa10.37□□□□□ -0.75
COL6A3-203ENST00000353578 H0YGX0 51 aa10.37□□□□□ -0.75
COL6A3-203ENST00000353578 DEPPQ9NTK1 212 aa10.37□□□□□ -0.75
COL6A3-203ENST00000353578 PMS2CLQ68D20 193 aa10.37□□□□□ -0.75
COL6A3-203ENST00000353578 TMEM14CQ9P0S9 112 aa10.37□□□□□ -0.75
COL6A3-203ENST00000353578 ZNF319Q9P2F9 582 aa10.37□□□□□ -0.75
COL6A3-203ENST00000353578 LOC102723996A0A087X1L8 192 aa10.37□□□□□ -0.75
COL6A3-203ENST00000353578 SIGLEC15Q6ZMC9 328 aa10.37□□□□□ -0.75
COL6A3-203ENST00000353578 PRIMA1Q86XR5 153 aa10.37□□□□□ -0.75
COL6A3-203ENST00000353578 ITLN1Q8WWA0 313 aa10.36□□□□□ -0.75
COL6A3-203ENST00000353578 HAPLN4Q86UW8 402 aa10.36□□□□□ -0.75
COL6A3-203ENST00000353578 PNRC2Q9NPJ4 139 aaKnown RBP10.36□□□□□ -0.75
COL6A3-203ENST00000353578 IGKV1D-13A0A0B4J2D9 117 aa10.36□□□□□ -0.75
COL6A3-203ENST00000353578 H0YJW9 148 aa10.36□□□□□ -0.75
COL6A3-203ENST00000353578 IGKV1-13P0DP09 117 aa10.36□□□□□ -0.75
COL6A3-203ENST00000353578 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.35□□□□□ -0.75
COL6A3-203ENST00000353578 CRYGSP22914 178 aa10.35□□□□□ -0.75
COL6A3-203ENST00000353578 SCRT2Q9NQ03 307 aa10.35□□□□□ -0.75
COL6A3-203ENST00000353578 IGKV3-7A0A075B6H7 116 aa10.35□□□□□ -0.75
COL6A3-203ENST00000353578 PYYP10082 97 aa10.35□□□□□ -0.75
COL6A3-203ENST00000353578 DEFB109BQ30KR1 87 aa10.35□□□□□ -0.75
COL6A3-203ENST00000353578 GPHA2Q96T91 129 aa10.35□□□□□ -0.75
COL6A3-203ENST00000353578 TRBV7-1A0A0A6YYK4 115 aa10.35□□□□□ -0.75
COL6A3-203ENST00000353578 IGHG3P01860 377 aa10.35□□□□□ -0.75
COL6A3-203ENST00000353578 TRAV40A0A0B4J280 105 aa10.35□□□□□ -0.75
COL6A3-203ENST00000353578 RHOHQ15669 191 aa10.35□□□□□ -0.75
COL6A3-203ENST00000353578 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.35□□□□□ -0.75
COL6A3-203ENST00000353578 LILRA6Q6PI73 481 aa10.35□□□□□ -0.75
COL6A3-203ENST00000353578 A0A1B0GX51 115 aa10.35□□□□□ -0.75
COL6A3-203ENST00000353578 QRFPP83859 136 aa10.35□□□□□ -0.75
COL6A3-203ENST00000353578 A0A087WX48 190 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 IGHV1-45A0A0A0MS14 117 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 SH2D1AO60880 128 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 CT55Q8WUE5 264 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 PRDM6Q9NQX0 595 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 H3BTX0 84 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 VSIRQ9H7M9 311 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 CFC1BP0CG36 223 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 CFC1P0CG37 223 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 MP68P56378 58 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 RPL15P61313 204 aaKnown RBP10.34□□□□□ -0.75
COL6A3-203ENST00000353578 RPL36AP83881 106 aaKnown RBP10.34□□□□□ -0.75
COL6A3-203ENST00000353578 RPL36ALQ969Q0 106 aaKnown RBP10.34□□□□□ -0.75
COL6A3-203ENST00000353578 FAM240AA0A1B0GVK7 77 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 ORMDL1Q9P0S3 153 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 PRSS29PA6NIE9 313 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 TRGV3P03979 118 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 CD33P20138 364 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 DUX4L9Q6RFH8 374 aaPredicted RBP10.34□□□□□ -0.75
COL6A3-203ENST00000353578 ZNF493Q6ZR52 646 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 Q6ZUT4 128 aa10.34□□□□□ -0.75
COL6A3-203ENST00000353578 ANKHD1Q8IWZ3 2542 aaKnown RBP10.33□□□□□ -0.76
COL6A3-203ENST00000353578 CD55P08174 381 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms