RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 TRAV5A0A0B4J249 113 aa16.06■□□□□ 0.16
SNX3-202ENST00000349379 GCSAMLQ5JQS6 135 aa16.06■□□□□ 0.16
SNX3-202ENST00000349379 C1QTNF4Q9BXJ3 329 aa16.06■□□□□ 0.16
SNX3-202ENST00000349379 PARD6GQ9BYG4 376 aaPredicted RBP16.06■□□□□ 0.16
SNX3-202ENST00000349379 KMT2CQ8NEZ4 4911 aaKnown RBP16.06■□□□□ 0.16
SNX3-202ENST00000349379 HLA-DMBP28068 263 aa16.05■□□□□ 0.16
SNX3-202ENST00000349379 Q5BKY6 102 aa16.05■□□□□ 0.16
SNX3-202ENST00000349379 FAM78BQ5VT40 261 aa16.05■□□□□ 0.16
SNX3-202ENST00000349379 SLC50A1Q9BRV3 221 aa16.05■□□□□ 0.16
SNX3-202ENST00000349379 SMIM3Q9BZL3 60 aa16.05■□□□□ 0.16
SNX3-202ENST00000349379 C11orf68Q9H3H3 251 aaKnown RBP16.05■□□□□ 0.16
SNX3-202ENST00000349379 WFDC1Q9HC57 220 aa16.05■□□□□ 0.16
SNX3-202ENST00000349379 CLEC5AQ9NY25 188 aa16.05■□□□□ 0.16
SNX3-202ENST00000349379 H3BQ15 152 aa16.04■□□□□ 0.16
SNX3-202ENST00000349379 IGKV3-20P01619 116 aa16.04■□□□□ 0.16
SNX3-202ENST00000349379 PSG3Q16557 428 aa16.04■□□□□ 0.16
SNX3-202ENST00000349379 ZFAND6Q6FIF0 208 aa16.04■□□□□ 0.16
SNX3-202ENST00000349379 AMTNQ6UX39 209 aa16.04■□□□□ 0.16
SNX3-202ENST00000349379 OR4B1Q8NGF8 309 aa16.04■□□□□ 0.16
SNX3-202ENST00000349379 SAT2Q96F10 170 aaPredicted RBP16.04■□□□□ 0.16
SNX3-202ENST00000349379 AQP10Q96PS8 301 aa16.04■□□□□ 0.16
SNX3-202ENST00000349379 TMEM14CQ9P0S9 112 aa16.04■□□□□ 0.16
SNX3-202ENST00000349379 X6R8D5 127 aa16.04■□□□□ 0.16
SNX3-202ENST00000349379 C17orf112F2Z3M2 114 aa16.03■□□□□ 0.16
SNX3-202ENST00000349379 SLC17A3O00476 420 aa16.03■□□□□ 0.16
SNX3-202ENST00000349379 PSG9Q00887 426 aa16.03■□□□□ 0.16
SNX3-202ENST00000349379 Q8NAQ8 132 aa16.03■□□□□ 0.16
SNX3-202ENST00000349379 XCL2Q9UBD3 114 aa16.03■□□□□ 0.16
SNX3-202ENST00000349379 IFNA5P01569 189 aa16.02■□□□□ 0.16
SNX3-202ENST00000349379 SNRPCP09234 159 aaKnown RBP16.02■□□□□ 0.16
SNX3-202ENST00000349379 GUK1Q16774 197 aa16.02■□□□□ 0.16
SNX3-202ENST00000349379 ZNF738Q8NE65 137 aa16.02■□□□□ 0.16
SNX3-202ENST00000349379 FAM167A-AS1Q96KT0 104 aa16.02■□□□□ 0.16
SNX3-202ENST00000349379 SLC35B3Q9H1N7 401 aa16.02■□□□□ 0.16
SNX3-202ENST00000349379 ZNF586Q9NXT0 402 aa16.02■□□□□ 0.16
SNX3-202ENST00000349379 ZNF253O75346 499 aa16.01■□□□□ 0.15
SNX3-202ENST00000349379 DUSP14O95147 198 aaKnown RBP16.01■□□□□ 0.15
SNX3-202ENST00000349379 CNN1P51911 297 aaKnown RBP16.01■□□□□ 0.15
SNX3-202ENST00000349379 ZNF705AQ6ZN79 300 aaPredicted RBP16.01■□□□□ 0.15
SNX3-202ENST00000349379 LRRC20Q8TCA0 184 aa16.01■□□□□ 0.15
SNX3-202ENST00000349379 G3V3Q6 166 aa16■□□□□ 0.15
SNX3-202ENST00000349379 H3BTX0 84 aa16■□□□□ 0.15
SNX3-202ENST00000349379 MIFP14174 115 aa16■□□□□ 0.15
SNX3-202ENST00000349379 FXYD7P58549 80 aa16■□□□□ 0.15
SNX3-202ENST00000349379 OR8A1Q8NGG7 326 aa16■□□□□ 0.15
SNX3-202ENST00000349379 SCGB1C1Q8TD33 95 aa16■□□□□ 0.15
SNX3-202ENST00000349379 SLC25A2Q9BXI2 301 aa16■□□□□ 0.15
SNX3-202ENST00000349379 MRPL32Q9BYC8 188 aaKnown RBP16■□□□□ 0.15
SNX3-202ENST00000349379 ZNF705DP0CH99 300 aaPredicted RBP15.99■□□□□ 0.15
SNX3-202ENST00000349379 ZNF705BP0CI00 300 aaPredicted RBP15.99■□□□□ 0.15
SNX3-202ENST00000349379 HIST1H1EP10412 219 aaKnown RBP15.99■□□□□ 0.15
SNX3-202ENST00000349379 MIR17HGQ75NE6 70 aa15.99■□□□□ 0.15
SNX3-202ENST00000349379 MFFQ9GZY8 342 aa15.99■□□□□ 0.15
SNX3-202ENST00000349379 TRBV19A0A075B6N1 114 aa15.98■□□□□ 0.15
SNX3-202ENST00000349379 IGHV4-28A0A0C4DH34 117 aa15.98■□□□□ 0.15
SNX3-202ENST00000349379 ZNF705FA8MVS1 300 aaPredicted RBP15.98■□□□□ 0.15
SNX3-202ENST00000349379 RBMY1A1P0DJD3 496 aaKnown RBP15.98■□□□□ 0.15
SNX3-202ENST00000349379 RBMY1CP0DJD4 496 aa15.98■□□□□ 0.15
SNX3-202ENST00000349379 RBMY1FQ15415 496 aaKnown RBP15.98■□□□□ 0.15
SNX3-202ENST00000349379 FFAR4Q5NUL3 377 aa15.98■□□□□ 0.15
SNX3-202ENST00000349379 OR2T35Q8NGX2 323 aa15.98■□□□□ 0.15
SNX3-202ENST00000349379 RPUSD4Q96CM3 377 aaKnown RBP15.98■□□□□ 0.15
SNX3-202ENST00000349379 FUT9Q9Y231 359 aa15.98■□□□□ 0.15
SNX3-202ENST00000349379 NDUFB4O95168 129 aa15.97■□□□□ 0.15
SNX3-202ENST00000349379 PYYP10082 97 aa15.97■□□□□ 0.15
SNX3-202ENST00000349379 PDE6HQ13956 83 aa15.97■□□□□ 0.15
SNX3-202ENST00000349379 NEU1Q99519 415 aa15.97■□□□□ 0.15
SNX3-202ENST00000349379 TIMM9Q9Y5J7 89 aa15.97■□□□□ 0.15
SNX3-202ENST00000349379 RFNGQ9Y644 331 aa15.97■□□□□ 0.15
SNX3-202ENST00000349379 RNF222A6NCQ9 220 aa15.96■□□□□ 0.15
SNX3-202ENST00000349379 DEFB4AO15263 64 aa15.96■□□□□ 0.15
SNX3-202ENST00000349379 HIST1H1AQ02539 215 aaPredicted RBP15.96■□□□□ 0.15
SNX3-202ENST00000349379 ZNF266Q14584 549 aa15.96■□□□□ 0.15
SNX3-202ENST00000349379 TNFSF18Q9UNG2 199 aa15.96■□□□□ 0.15
SNX3-202ENST00000349379 DYNC2H1Q8NCM8 4307 aaKnown RBP15.95■□□□□ 0.14
SNX3-202ENST00000349379 CRXO43186 299 aaPredicted RBP15.95■□□□□ 0.14
SNX3-202ENST00000349379 AMBPP02760 352 aa15.95■□□□□ 0.14
SNX3-202ENST00000349379 C1orf158Q8N1D5 194 aa15.95■□□□□ 0.14
SNX3-202ENST00000349379 RYR3Q15413 4870 aa15.95■□□□□ 0.14
SNX3-202ENST00000349379 PRAC2D3DTV9 90 aa15.94■□□□□ 0.14
SNX3-202ENST00000349379 MRPL53Q96EL3 112 aaKnown RBP15.94■□□□□ 0.14
SNX3-202ENST00000349379 ZNF503Q96F45 646 aa15.94■□□□□ 0.14
SNX3-202ENST00000349379 IGF2BP2-AS1Q96M15 143 aa15.94■□□□□ 0.14
SNX3-202ENST00000349379 OR51M1Q9H341 326 aa15.94■□□□□ 0.14
SNX3-202ENST00000349379 FXYD6-FXYD2A0A087WZ82 144 aa15.93■□□□□ 0.14
SNX3-202ENST00000349379 BOLA2-SMG1P6H3BVE0 249 aa15.93■□□□□ 0.14
SNX3-202ENST00000349379 PRB4P10163 310 aaPredicted RBP15.93■□□□□ 0.14
SNX3-202ENST00000349379 SPINK13Q1W4C9 94 aa15.93■□□□□ 0.14
SNX3-202ENST00000349379 FXYD5Q96DB9 178 aa15.93■□□□□ 0.14
SNX3-202ENST00000349379 TENM2Q9NT68 2774 aa15.93■□□□□ 0.14
SNX3-202ENST00000349379 LYSTQ99698 3801 aa15.92■□□□□ 0.14
SNX3-202ENST00000349379 SMIM9A6NGZ8 99 aa15.92■□□□□ 0.14
SNX3-202ENST00000349379 M0R2Z0 102 aa15.92■□□□□ 0.14
SNX3-202ENST00000349379 NBEAP1P0C6P0 100 aa15.92■□□□□ 0.14
SNX3-202ENST00000349379 RHOBP62745 196 aa15.92■□□□□ 0.14
SNX3-202ENST00000349379 INO80EQ8NBZ0 244 aaPredicted RBP15.92■□□□□ 0.14
SNX3-202ENST00000349379 OR2G3Q8NGZ4 309 aa15.92■□□□□ 0.14
SNX3-202ENST00000349379 C11orf45Q8TAV5 145 aa15.92■□□□□ 0.14
SNX3-202ENST00000349379 PSMG3Q9BT73 122 aaPredicted RBP15.92■□□□□ 0.14
SNX3-202ENST00000349379 PAXXQ9BUH6 204 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms