RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 IGHG4P01861 327 aa17.35■□□□□ 0.37
TNFRSF10B-202ENST00000347739 METTL26Q96S19 204 aa17.35■□□□□ 0.37
TNFRSF10B-202ENST00000347739 SMAD5-AS1Q9Y6J3 95 aa17.35■□□□□ 0.37
TNFRSF10B-202ENST00000347739 U3KQE9 123 aa17.35■□□□□ 0.37
TNFRSF10B-202ENST00000347739 PDZD2O15018 2839 aa17.35■□□□□ 0.37
TNFRSF10B-202ENST00000347739 PHOX2AO14813 284 aa17.34■□□□□ 0.37
TNFRSF10B-202ENST00000347739 TMEM75Q8N9X5 138 aa17.34■□□□□ 0.37
TNFRSF10B-202ENST00000347739 NDUFA4O00483 81 aa17.33■□□□□ 0.37
TNFRSF10B-202ENST00000347739 HOXA3O43365 443 aaPredicted RBP17.33■□□□□ 0.37
TNFRSF10B-202ENST00000347739 IGLV2-11P01706 119 aa17.33■□□□□ 0.37
TNFRSF10B-202ENST00000347739 S100A6P06703 90 aa17.33■□□□□ 0.37
TNFRSF10B-202ENST00000347739 RPEL1Q2QD12 228 aa17.33■□□□□ 0.37
TNFRSF10B-202ENST00000347739 GOLT1AQ6ZVE7 132 aa17.33■□□□□ 0.37
TNFRSF10B-202ENST00000347739 Q86TA4 180 aa17.33■□□□□ 0.37
TNFRSF10B-202ENST00000347739 C5orf52A6NGY3 159 aa17.33■□□□□ 0.36
TNFRSF10B-202ENST00000347739 K7EQM0 130 aa17.33■□□□□ 0.36
TNFRSF10B-202ENST00000347739 PSMB8P28062 276 aa17.33■□□□□ 0.36
TNFRSF10B-202ENST00000347739 TMEM95Q3KNT9 176 aa17.33■□□□□ 0.36
TNFRSF10B-202ENST00000347739 PRSS22Q9GZN4 317 aa17.33■□□□□ 0.36
TNFRSF10B-202ENST00000347739 SAV1Q9H4B6 383 aaPredicted RBP17.33■□□□□ 0.36
TNFRSF10B-202ENST00000347739 TEX15Q9BXT5 2789 aa17.32■□□□□ 0.36
TNFRSF10B-202ENST00000347739 SERTM2A0A1B0GWG4 89 aa17.32■□□□□ 0.36
TNFRSF10B-202ENST00000347739 DIRC3C9JPN6 131 aa17.32■□□□□ 0.36
TNFRSF10B-202ENST00000347739 FAM209BQ5JX69 171 aa17.32■□□□□ 0.36
TNFRSF10B-202ENST00000347739 SGK494Q96LW2 274 aa17.32■□□□□ 0.36
TNFRSF10B-202ENST00000347739 NPFFR1Q9GZQ6 430 aa17.32■□□□□ 0.36
TNFRSF10B-202ENST00000347739 TRBV12-3P01733 135 aa17.31■□□□□ 0.36
TNFRSF10B-202ENST00000347739 OR4X2Q8NGF9 303 aa17.31■□□□□ 0.36
TNFRSF10B-202ENST00000347739 ITPR3Q14573 2671 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 ZNF320A2RRD8 509 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 TMEM183AQ8IXX5 376 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 SMAD7O15105 426 aaKnown RBP17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 HIST1H2BKO60814 126 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 HIST1H2BJP06899 126 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 HIST1H2BOP23527 126 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 HIST1H2BBP33778 126 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 CSN1S1P47710 185 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 HIST1H2BDP58876 126 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 SNRPEP62304 92 aaKnown RBP17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 HIST1H2BCP62807 126 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 HIST2H2BEQ16778 126 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 FRZBQ92765 325 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 HIST1H2BHQ93079 126 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 HIST1H2BNQ99877 126 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 HIST1H2BMQ99879 126 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 ZNF702PQ9H963 129 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 ZNF331Q9NQX6 463 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 ZNF492Q9P255 531 aa17.3■□□□□ 0.36
TNFRSF10B-202ENST00000347739 MXRA5Q9NR99 2828 aa17.29■□□□□ 0.36
TNFRSF10B-202ENST00000347739 TRAV8-1A0A0A6YYK1 113 aa17.29■□□□□ 0.36
TNFRSF10B-202ENST00000347739 SMIM27A0A1W2PRY6 76 aa17.29■□□□□ 0.36
TNFRSF10B-202ENST00000347739 ZNF705GA8MUZ8 300 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF10B-202ENST00000347739 M0R3E3 92 aa17.29■□□□□ 0.36
TNFRSF10B-202ENST00000347739 IGHV3-11P01762 117 aa17.29■□□□□ 0.36
TNFRSF10B-202ENST00000347739 PSG3Q16557 428 aa17.29■□□□□ 0.36
TNFRSF10B-202ENST00000347739 NUDT10Q8NFP7 164 aa17.29■□□□□ 0.36
TNFRSF10B-202ENST00000347739 NUDT11Q96G61 164 aa17.29■□□□□ 0.36
TNFRSF10B-202ENST00000347739 ZFP30Q9Y2G7 519 aa17.29■□□□□ 0.36
TNFRSF10B-202ENST00000347739 UBE2CO00762 179 aa17.28■□□□□ 0.36
TNFRSF10B-202ENST00000347739 MEOX2P50222 304 aa17.28■□□□□ 0.36
TNFRSF10B-202ENST00000347739 ACTL10Q5JWF8 245 aa17.28■□□□□ 0.36
TNFRSF10B-202ENST00000347739 GATCO43716 136 aaKnown RBP17.27■□□□□ 0.36
TNFRSF10B-202ENST00000347739 APOHP02749 345 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF10B-202ENST00000347739 TRGC1P0CF51 173 aa17.27■□□□□ 0.36
TNFRSF10B-202ENST00000347739 PRR27Q6MZM9 219 aa17.27■□□□□ 0.36
TNFRSF10B-202ENST00000347739 LCNL1Q6ZST4 164 aa17.27■□□□□ 0.36
TNFRSF10B-202ENST00000347739 TMEM86BQ8N661 226 aa17.27■□□□□ 0.36
TNFRSF10B-202ENST00000347739 SERTAD4Q9NUC0 356 aa17.27■□□□□ 0.36
TNFRSF10B-202ENST00000347739 ZNF785A8K8V0 405 aa17.27■□□□□ 0.35
TNFRSF10B-202ENST00000347739 PRNTQ86SH4 94 aa17.27■□□□□ 0.35
TNFRSF10B-202ENST00000347739 SIGLECL1Q8N7X8 197 aa17.27■□□□□ 0.35
TNFRSF10B-202ENST00000347739 GRAMD2BQ96HH9 432 aa17.27■□□□□ 0.35
TNFRSF10B-202ENST00000347739 SLC50A1Q9BRV3 221 aa17.27■□□□□ 0.35
TNFRSF10B-202ENST00000347739 PSG8Q9UQ74 426 aa17.27■□□□□ 0.35
TNFRSF10B-202ENST00000347739 C19orf71A6NCJ1 209 aa17.26■□□□□ 0.35
TNFRSF10B-202ENST00000347739 FBLL1A6NHQ2 334 aaKnown RBP17.26■□□□□ 0.35
TNFRSF10B-202ENST00000347739 SLC35B1P78383 322 aa17.26■□□□□ 0.35
TNFRSF10B-202ENST00000347739 C16orf54Q6UWD8 224 aa17.26■□□□□ 0.35
TNFRSF10B-202ENST00000347739 UNQ9165/PRO28630Q6UXU0 137 aa17.26■□□□□ 0.35
TNFRSF10B-202ENST00000347739 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.26■□□□□ 0.35
TNFRSF10B-202ENST00000347739 Q8N2B8 174 aa17.26■□□□□ 0.35
TNFRSF10B-202ENST00000347739 ZNF469Q96JG9 3925 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF10B-202ENST00000347739 ZNF207O43670 478 aaKnown RBP17.25■□□□□ 0.35
TNFRSF10B-202ENST00000347739 RPL19P84098 196 aaKnown RBP17.25■□□□□ 0.35
TNFRSF10B-202ENST00000347739 KRTAP1-1Q07627 177 aa17.25■□□□□ 0.35
TNFRSF10B-202ENST00000347739 PEF1Q9UBV8 284 aaKnown RBP17.25■□□□□ 0.35
TNFRSF10B-202ENST00000347739 IGHV3-66A0A0C4DH42 116 aa17.24■□□□□ 0.35
TNFRSF10B-202ENST00000347739 FABP9Q0Z7S8 132 aa17.24■□□□□ 0.35
TNFRSF10B-202ENST00000347739 FOXE3Q13461 319 aa17.24■□□□□ 0.35
TNFRSF10B-202ENST00000347739 CT83Q5H943 113 aa17.24■□□□□ 0.35
TNFRSF10B-202ENST00000347739 GLMPQ8WWB7 406 aa17.24■□□□□ 0.35
TNFRSF10B-202ENST00000347739 CD5LO43866 347 aa17.24■□□□□ 0.35
TNFRSF10B-202ENST00000347739 ELANEP08246 267 aa17.24■□□□□ 0.35
TNFRSF10B-202ENST00000347739 LINC00322Q6ZN03 302 aaPredicted RBP17.24■□□□□ 0.35
TNFRSF10B-202ENST00000347739 IL17RELQ6ZVW7 336 aa17.24■□□□□ 0.35
TNFRSF10B-202ENST00000347739 MYOZ3Q8TDC0 251 aa17.24■□□□□ 0.35
TNFRSF10B-202ENST00000347739 RPP21Q9H633 154 aaKnown RBP17.23■□□□□ 0.35
TNFRSF10B-202ENST00000347739 IGHV3OR16-13A0A075B7E8 117 aa17.22■□□□□ 0.35
TNFRSF10B-202ENST00000347739 IGHV3-74A0A0B4J1X5 117 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms