RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 DEFB1P60022 68 aa11.46□□□□□ -0.57
TSPAN4-201ENST00000346501 RHOBP62745 196 aa11.46□□□□□ -0.57
TSPAN4-201ENST00000346501 PSG3Q16557 428 aa11.46□□□□□ -0.57
TSPAN4-201ENST00000346501 CSNK1G2-AS1Q8NCQ2 148 aa11.46□□□□□ -0.57
TSPAN4-201ENST00000346501 THAP6Q8TBB0 222 aa11.46□□□□□ -0.57
TSPAN4-201ENST00000346501 PHLDA1Q8WV24 401 aaPredicted RBP11.46□□□□□ -0.57
TSPAN4-201ENST00000346501 TMEM37Q8WXS4 190 aa11.46□□□□□ -0.57
TSPAN4-201ENST00000346501 TMEM208Q9BTX3 173 aa11.46□□□□□ -0.57
TSPAN4-201ENST00000346501 NPCDR1Q9BY65 106 aa11.46□□□□□ -0.57
TSPAN4-201ENST00000346501 MED28Q9H204 178 aa11.46□□□□□ -0.57
TSPAN4-201ENST00000346501 TMEM189A5PLL7 270 aa11.45□□□□□ -0.58
TSPAN4-201ENST00000346501 CXCL3P19876 107 aa11.45□□□□□ -0.58
TSPAN4-201ENST00000346501 RNF182Q8N6D2 247 aa11.45□□□□□ -0.58
TSPAN4-201ENST00000346501 Q8NAQ8 132 aa11.45□□□□□ -0.58
TSPAN4-201ENST00000346501 SCGB1C1Q8TD33 95 aa11.45□□□□□ -0.58
TSPAN4-201ENST00000346501 C20orf173Q96LM9 149 aa11.45□□□□□ -0.58
TSPAN4-201ENST00000346501 HRH4Q9H3N8 390 aa11.45□□□□□ -0.58
TSPAN4-201ENST00000346501 ALG5Q9Y673 324 aa11.45□□□□□ -0.58
TSPAN4-201ENST00000346501 C11orf94C9JXX5 98 aa11.44□□□□□ -0.58
TSPAN4-201ENST00000346501 H0YIZ8 118 aa11.44□□□□□ -0.58
TSPAN4-201ENST00000346501 RPL12P30050 165 aaKnown RBP11.44□□□□□ -0.58
TSPAN4-201ENST00000346501 CNN1P51911 297 aaKnown RBP11.44□□□□□ -0.58
TSPAN4-201ENST00000346501 HIST1H1AQ02539 215 aaPredicted RBP11.44□□□□□ -0.58
TSPAN4-201ENST00000346501 IGFL4Q6B9Z1 124 aa11.44□□□□□ -0.58
TSPAN4-201ENST00000346501 RPUSD4Q96CM3 377 aaKnown RBP11.44□□□□□ -0.58
TSPAN4-201ENST00000346501 NEU1Q99519 415 aa11.44□□□□□ -0.58
TSPAN4-201ENST00000346501 ATP5SQ99766 215 aa11.44□□□□□ -0.58
TSPAN4-201ENST00000346501 SLC35B3Q9H1N7 401 aa11.44□□□□□ -0.58
TSPAN4-201ENST00000346501 X6R8D5 127 aa11.44□□□□□ -0.58
TSPAN4-201ENST00000346501 TRAV8-2A0A0B4J237 113 aa11.43□□□□□ -0.58
TSPAN4-201ENST00000346501 HBE1P02100 147 aa11.43□□□□□ -0.58
TSPAN4-201ENST00000346501 NANOS2P60321 138 aaKnown RBP11.43□□□□□ -0.58
TSPAN4-201ENST00000346501 OR8A1Q8NGG7 326 aa11.43□□□□□ -0.58
TSPAN4-201ENST00000346501 OR10J6PQ8NGY7 276 aa11.43□□□□□ -0.58
TSPAN4-201ENST00000346501 WDR61Q9GZS3 305 aaKnown RBP11.43□□□□□ -0.58
TSPAN4-201ENST00000346501 ZNF331Q9NQX6 463 aaPredicted RBP11.43□□□□□ -0.58
TSPAN4-201ENST00000346501 MBD2Q9UBB5 411 aa11.43□□□□□ -0.58
TSPAN4-201ENST00000346501 HSPB11Q9Y547 144 aa11.43□□□□□ -0.58
TSPAN4-201ENST00000346501 RFNGQ9Y644 331 aa11.43□□□□□ -0.58
TSPAN4-201ENST00000346501 TEX48A0A1B0GUV7 120 aa11.42□□□□□ -0.58
TSPAN4-201ENST00000346501 MRPS12O15235 138 aaKnown RBP11.42□□□□□ -0.58
TSPAN4-201ENST00000346501 INSP01308 110 aa11.42□□□□□ -0.58
TSPAN4-201ENST00000346501 RBMY1A1P0DJD3 496 aaKnown RBP11.42□□□□□ -0.58
TSPAN4-201ENST00000346501 RBMY1CP0DJD4 496 aa11.42□□□□□ -0.58
TSPAN4-201ENST00000346501 RBMY1FQ15415 496 aaKnown RBP11.42□□□□□ -0.58
TSPAN4-201ENST00000346501 ZNF705AQ6ZN79 300 aaPredicted RBP11.42□□□□□ -0.58
TSPAN4-201ENST00000346501 IGF2BP2-AS1Q96M15 143 aa11.42□□□□□ -0.58
TSPAN4-201ENST00000346501 C17orf77Q96MU5 243 aa11.42□□□□□ -0.58
TSPAN4-201ENST00000346501 RNF126Q9BV68 326 aa11.42□□□□□ -0.58
TSPAN4-201ENST00000346501 TIMM9Q9Y5J7 89 aa11.42□□□□□ -0.58
TSPAN4-201ENST00000346501 RRN3P1Q2M238 152 aa11.41□□□□□ -0.58
TSPAN4-201ENST00000346501 RGS21Q2M5E4 152 aa11.41□□□□□ -0.58
TSPAN4-201ENST00000346501 OR11H7Q8NGC8 314 aa11.41□□□□□ -0.58
TSPAN4-201ENST00000346501 AAMDCQ9H7C9 122 aa11.41□□□□□ -0.58
TSPAN4-201ENST00000346501 TRAV5A0A0B4J249 113 aa11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 A8MTW9 85 aa11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 ZNF705FA8MVS1 300 aaPredicted RBP11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 BOLA2-SMG1P6H3BVE0 249 aa11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 ZNF253O75346 499 aa11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 SNRPCP09234 159 aaKnown RBP11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 ZNF705DP0CH99 300 aaPredicted RBP11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 ZNF705BP0CI00 300 aaPredicted RBP11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 SPART-AS1P0CW21 52 aa11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 IGLC2P0DOY2 106 aa11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 HIST1H1EP10412 219 aaKnown RBP11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 TSPOP30536 169 aa11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 SPINK13Q1W4C9 94 aa11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 MORN5Q5VZ52 161 aa11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 C2CD4CQ8TF44 421 aa11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 ASB13Q8WXK3 278 aa11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 MRPL32Q9BYC8 188 aaKnown RBP11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 TMEM14CQ9P0S9 112 aa11.4□□□□□ -0.58
TSPAN4-201ENST00000346501 HLA-DMBP28068 263 aa11.39□□□□□ -0.59
TSPAN4-201ENST00000346501 EMP1P54849 157 aa11.39□□□□□ -0.59
TSPAN4-201ENST00000346501 TCTAP57738 103 aa11.39□□□□□ -0.59
TSPAN4-201ENST00000346501 PDE6HQ13956 83 aa11.39□□□□□ -0.59
TSPAN4-201ENST00000346501 SMIM3Q9BZL3 60 aa11.39□□□□□ -0.59
TSPAN4-201ENST00000346501 PRELID1Q9Y255 219 aa11.39□□□□□ -0.59
TSPAN4-201ENST00000346501 TRAV10A0A0B4J240 114 aa11.38□□□□□ -0.59
TSPAN4-201ENST00000346501 H3BQ15 152 aa11.38□□□□□ -0.59
TSPAN4-201ENST00000346501 H3BTX0 84 aa11.38□□□□□ -0.59
TSPAN4-201ENST00000346501 M0R2Z0 102 aa11.38□□□□□ -0.59
TSPAN4-201ENST00000346501 TAS2R45P59539 299 aa11.38□□□□□ -0.59
TSPAN4-201ENST00000346501 AMTNQ6UX39 209 aa11.38□□□□□ -0.59
TSPAN4-201ENST00000346501 TMEM256Q8N2U0 113 aa11.38□□□□□ -0.59
TSPAN4-201ENST00000346501 TRBV19A0A075B6N1 114 aa11.37□□□□□ -0.59
TSPAN4-201ENST00000346501 LOC102723971A0A1B0GUV8 181 aa11.37□□□□□ -0.59
TSPAN4-201ENST00000346501 LY6G6CO95867 125 aa11.37□□□□□ -0.59
TSPAN4-201ENST00000346501 CDKN1BP46527 198 aa11.37□□□□□ -0.59
TSPAN4-201ENST00000346501 ZNF266Q14584 549 aa11.37□□□□□ -0.59
TSPAN4-201ENST00000346501 FCN2Q15485 313 aa11.37□□□□□ -0.59
TSPAN4-201ENST00000346501 FFAR4Q5NUL3 377 aa11.37□□□□□ -0.59
TSPAN4-201ENST00000346501 BLNKQ8WV28 456 aa11.37□□□□□ -0.59
TSPAN4-201ENST00000346501 MRPL53Q96EL3 112 aaKnown RBP11.37□□□□□ -0.59
TSPAN4-201ENST00000346501 SAT2Q96F10 170 aaPredicted RBP11.37□□□□□ -0.59
TSPAN4-201ENST00000346501 OR51M1Q9H341 326 aa11.37□□□□□ -0.59
TSPAN4-201ENST00000346501 ZNF586Q9NXT0 402 aa11.37□□□□□ -0.59
TSPAN4-201ENST00000346501 FUT9Q9Y231 359 aa11.37□□□□□ -0.59
TSPAN4-201ENST00000346501 RYR3Q15413 4870 aa11.36□□□□□ -0.59
TSPAN4-201ENST00000346501 SLC17A3O00476 420 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms