RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ZNF738Q8NE65 137 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 OR4C5Q8NGB2 326 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 PIFOQ8TCI5 191 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 FRZBQ92765 325 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 MBD6Q96DN6 1003 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 ELOVL1Q9BW60 279 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 URGCP-MRPS24S4R325 110 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 CR1P17927 2039 aa7.23□□□□□ -1.25
ATG4A-202ENST00000345734 MXRA5Q9NR99 2828 aa7.23□□□□□ -1.25
ATG4A-202ENST00000345734 A0A096LNT2 108 aa7.23□□□□□ -1.25
ATG4A-202ENST00000345734 A0A1W2PRX2 142 aa7.23□□□□□ -1.25
ATG4A-202ENST00000345734 PGPEP1LA6NFU8 196 aa7.23□□□□□ -1.25
ATG4A-202ENST00000345734 B4DEV8 164 aa7.23□□□□□ -1.25
ATG4A-202ENST00000345734 B4DSR2 109 aa7.23□□□□□ -1.25
ATG4A-202ENST00000345734 PSG1P11464 419 aa7.23□□□□□ -1.25
ATG4A-202ENST00000345734 SLC25A16P16260 332 aa7.23□□□□□ -1.25
ATG4A-202ENST00000345734 GBGT1Q8N5D6 347 aa7.23□□□□□ -1.25
ATG4A-202ENST00000345734 TXNDC17Q9BRA2 123 aa7.23□□□□□ -1.25
ATG4A-202ENST00000345734 TMEM242Q9NWH2 141 aa7.23□□□□□ -1.25
ATG4A-202ENST00000345734 GGTLC3B5MD39 225 aa7.22□□□□□ -1.25
ATG4A-202ENST00000345734 HYPMO75409 117 aa7.22□□□□□ -1.25
ATG4A-202ENST00000345734 OR2J3O76001 311 aa7.22□□□□□ -1.25
ATG4A-202ENST00000345734 NDUFB8O95169 186 aa7.22□□□□□ -1.25
ATG4A-202ENST00000345734 IGHV3-23P01764 117 aa7.22□□□□□ -1.25
ATG4A-202ENST00000345734 LYZP61626 148 aa7.22□□□□□ -1.25
ATG4A-202ENST00000345734 UBE2L3P68036 154 aaKnown RBP7.22□□□□□ -1.25
ATG4A-202ENST00000345734 ECSCRQ19T08 205 aa7.22□□□□□ -1.25
ATG4A-202ENST00000345734 PAXXQ9BUH6 204 aa7.22□□□□□ -1.25
ATG4A-202ENST00000345734 AKAP9Q99996 3911 aa7.22□□□□□ -1.25
ATG4A-202ENST00000345734 TRBV20OR9-2A0A075B6H5 130 aa7.22□□□□□ -1.25
ATG4A-202ENST00000345734 TRBV24-1A0A075B6N3 115 aa7.22□□□□□ -1.25
ATG4A-202ENST00000345734 ATP6V0E1O15342 81 aa7.22□□□□□ -1.25
ATG4A-202ENST00000345734 CXCL1P09341 107 aa7.22□□□□□ -1.25
ATG4A-202ENST00000345734 C16orf82Q7Z2V1 217 aa7.22□□□□□ -1.25
ATG4A-202ENST00000345734 C5orf56Q8N8D9 126 aa7.22□□□□□ -1.25
ATG4A-202ENST00000345734 FXYD5Q96DB9 178 aa7.22□□□□□ -1.25
ATG4A-202ENST00000345734 G3V318 75 aa7.21□□□□□ -1.25
ATG4A-202ENST00000345734 H0Y8G0 127 aa7.21□□□□□ -1.25
ATG4A-202ENST00000345734 PLP1P60201 277 aa7.21□□□□□ -1.25
ATG4A-202ENST00000345734 GAGE13Q4V321 117 aa7.21□□□□□ -1.25
ATG4A-202ENST00000345734 Q5PR19 223 aa7.21□□□□□ -1.25
ATG4A-202ENST00000345734 UNQ5815/PRO19632Q6UWF5 114 aa7.21□□□□□ -1.25
ATG4A-202ENST00000345734 SGMS2Q8NHU3 365 aa7.21□□□□□ -1.25
ATG4A-202ENST00000345734 MEGF9Q9H1U4 602 aa7.21□□□□□ -1.25
ATG4A-202ENST00000345734 CST9LQ9H4G1 147 aa7.21□□□□□ -1.25
ATG4A-202ENST00000345734 ARL2-SNX15V9GYD0 113 aa7.21□□□□□ -1.25
ATG4A-202ENST00000345734 CREBBPQ92793 2442 aa7.21□□□□□ -1.25
ATG4A-202ENST00000345734 TGIF2-C20orf24A0A0A6YYL0 155 aa7.21□□□□□ -1.26
ATG4A-202ENST00000345734 CRYBB3P26998 211 aa7.21□□□□□ -1.26
ATG4A-202ENST00000345734 LY6EQ16553 131 aa7.21□□□□□ -1.26
ATG4A-202ENST00000345734 TMEM183BQ1AE95 376 aa7.21□□□□□ -1.26
ATG4A-202ENST00000345734 PET117Q6UWS5 81 aa7.21□□□□□ -1.26
ATG4A-202ENST00000345734 LINC01356Q8N9X3 169 aa7.21□□□□□ -1.26
ATG4A-202ENST00000345734 C11orf52Q96A22 123 aa7.21□□□□□ -1.26
ATG4A-202ENST00000345734 HIGD1AQ9Y241 93 aa7.21□□□□□ -1.26
ATG4A-202ENST00000345734 COX11Q9Y6N1 276 aa7.21□□□□□ -1.26
ATG4A-202ENST00000345734 A0A1W2PRE2 83 aa7.2□□□□□ -1.26
ATG4A-202ENST00000345734 CLDN34H7C241 214 aa7.2□□□□□ -1.26
ATG4A-202ENST00000345734 MFAP4P55083 255 aa7.2□□□□□ -1.26
ATG4A-202ENST00000345734 Q56UQ5 140 aa7.2□□□□□ -1.26
ATG4A-202ENST00000345734 HIST2H2BCQ6DN03 193 aa7.2□□□□□ -1.26
ATG4A-202ENST00000345734 NECAP1Q8NC96 275 aa7.2□□□□□ -1.26
ATG4A-202ENST00000345734 FAM110DQ8TAY7 271 aaPredicted RBP7.2□□□□□ -1.26
ATG4A-202ENST00000345734 MOB4Q9Y3A3 225 aa7.2□□□□□ -1.26
ATG4A-202ENST00000345734 MDFIC2A0A1B0GVS7 189 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 OR2T8A6NH00 312 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 H3BTX0 84 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 H3BUX3 64 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 GNG7O60262 68 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 RHOGP84095 191 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 DEFB113Q30KQ7 82 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 OCC1Q8TAD7 63 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 BLNKQ8WV28 456 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 ZNF479Q96JC4 524 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 SLC25A39Q9BZJ4 359 aaPredicted RBP7.19□□□□□ -1.26
ATG4A-202ENST00000345734 CTDSP1Q9GZU7 261 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 C21orf62Q9NYP8 219 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 PRRC2AP48634 2157 aaKnown RBP7.19□□□□□ -1.26
ATG4A-202ENST00000345734 ITPR3Q14573 2671 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 HOXA3O43365 443 aaPredicted RBP7.19□□□□□ -1.26
ATG4A-202ENST00000345734 PLA2G2AP14555 144 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 GP9P14770 177 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 S100A7P31151 101 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 PRR27Q6MZM9 219 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 TEX43Q6ZNM6 134 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 ZNF329Q86UD4 541 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 ZNF491Q8N8L2 437 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 THYN1Q9P016 225 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 MRPL27Q9P0M9 148 aaKnown RBP7.19□□□□□ -1.26
ATG4A-202ENST00000345734 LINC00527Q9UJ94 153 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 ITPR2Q14571 2701 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 TLN2Q9Y4G6 2542 aa7.19□□□□□ -1.26
ATG4A-202ENST00000345734 CCDC168Q8NDH2 2452 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 HELTA6NFD8 242 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 H7BYZ3 331 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 K7EN84 100 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 TNFRSF6BO95407 300 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 TGFAP01135 160 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 IL4P05112 153 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 GATA3P23771 443 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms