RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ST20Q9HBF5 79 aa10□□□□□ -0.81
SNRNP48-201ENST00000342415 NACAE9PAV3 2078 aa10□□□□□ -0.81
SNRNP48-201ENST00000342415 NBR2O15453 112 aa10□□□□□ -0.81
SNRNP48-201ENST00000342415 FAM74A4Q5TZK3 123 aa10□□□□□ -0.81
SNRNP48-201ENST00000342415 C17orf77Q96MU5 243 aa10□□□□□ -0.81
SNRNP48-201ENST00000342415 A0A0G2JNJ9 132 aa10□□□□□ -0.81
SNRNP48-201ENST00000342415 ATP5L2Q7Z4Y8 100 aa10□□□□□ -0.81
SNRNP48-201ENST00000342415 IFI27L1Q96BM0 104 aa10□□□□□ -0.81
SNRNP48-201ENST00000342415 Q9UFV3 132 aa10□□□□□ -0.81
SNRNP48-201ENST00000342415 EYSQ5T1H1 3165 aa10□□□□□ -0.81
SNRNP48-201ENST00000342415 MBD3L4A6NDZ8 208 aaPredicted RBP10□□□□□ -0.81
SNRNP48-201ENST00000342415 MBD3L3A6NE82 208 aaPredicted RBP10□□□□□ -0.81
SNRNP48-201ENST00000342415 MBD3L5A6NJ08 208 aaPredicted RBP10□□□□□ -0.81
SNRNP48-201ENST00000342415 PSMB2P49721 201 aa10□□□□□ -0.81
SNRNP48-201ENST00000342415 PET117Q6UWS5 81 aa10□□□□□ -0.81
SNRNP48-201ENST00000342415 MBD3L2Q8NHZ7 208 aaPredicted RBP10□□□□□ -0.81
SNRNP48-201ENST00000342415 ARPC1AQ92747 370 aa10□□□□□ -0.81
SNRNP48-201ENST00000342415 PHLDA3Q9Y5J5 127 aa10□□□□□ -0.81
SNRNP48-201ENST00000342415 SOX21Q9Y651 276 aaPredicted RBP10□□□□□ -0.81
SNRNP48-201ENST00000342415 FAM106CPP0CH98 169 aa9.99□□□□□ -0.81
SNRNP48-201ENST00000342415 TMPRSS3P57727 454 aa9.99□□□□□ -0.81
SNRNP48-201ENST00000342415 PRSS57Q6UWY2 283 aa9.99□□□□□ -0.81
SNRNP48-201ENST00000342415 FREM2Q5SZK8 3169 aa9.99□□□□□ -0.81
SNRNP48-201ENST00000342415 IGHV3-11P01762 117 aa9.99□□□□□ -0.81
SNRNP48-201ENST00000342415 PSG9Q00887 426 aa9.99□□□□□ -0.81
SNRNP48-201ENST00000342415 FAM71F2Q6NXP2 309 aa9.99□□□□□ -0.81
SNRNP48-201ENST00000342415 C1orf229Q6ZS94 237 aaPredicted RBP9.99□□□□□ -0.81
SNRNP48-201ENST00000342415 CHCHD1Q96BP2 118 aaKnown RBP9.99□□□□□ -0.81
SNRNP48-201ENST00000342415 USP9XQ93008 2570 aaPredicted RBP9.99□□□□□ -0.81
SNRNP48-201ENST00000342415 ARHGAP32A7KAX9 2087 aa9.99□□□□□ -0.81
SNRNP48-201ENST00000342415 TRAV30A0A087WSZ9 112 aa9.99□□□□□ -0.81
SNRNP48-201ENST00000342415 SMIM27A0A1W2PRY6 76 aa9.99□□□□□ -0.81
SNRNP48-201ENST00000342415 METTL26Q96S19 204 aa9.99□□□□□ -0.81
SNRNP48-201ENST00000342415 HBDP02042 147 aa9.98□□□□□ -0.81
SNRNP48-201ENST00000342415 SMIM13P0DJ93 91 aa9.98□□□□□ -0.81
SNRNP48-201ENST00000342415 GTSCR1Q86UQ5 136 aa9.98□□□□□ -0.81
SNRNP48-201ENST00000342415 MRPL36Q9P0J6 103 aaKnown RBP9.98□□□□□ -0.81
SNRNP48-201ENST00000342415 IGHV1-24A0A0C4DH33 117 aa9.98□□□□□ -0.81
SNRNP48-201ENST00000342415 HIST1H1AQ02539 215 aaPredicted RBP9.98□□□□□ -0.81
SNRNP48-201ENST00000342415 PRR30Q53SZ7 412 aaPredicted RBP9.98□□□□□ -0.81
SNRNP48-201ENST00000342415 FXYD5Q96DB9 178 aa9.98□□□□□ -0.81
SNRNP48-201ENST00000342415 RITA1Q96K30 269 aa9.98□□□□□ -0.81
SNRNP48-201ENST00000342415 MYO15AQ9UKN7 3530 aa9.98□□□□□ -0.81
SNRNP48-201ENST00000342415 IGLV1-44P01699 117 aa9.98□□□□□ -0.81
SNRNP48-201ENST00000342415 OR2K2Q8NGT1 345 aa9.98□□□□□ -0.81
SNRNP48-201ENST00000342415 TRGV9Q99603 122 aa9.98□□□□□ -0.81
SNRNP48-201ENST00000342415 A0A1B0GWJ7 208 aa9.97□□□□□ -0.81
SNRNP48-201ENST00000342415 K7EM74 188 aa9.97□□□□□ -0.81
SNRNP48-201ENST00000342415 C8orf49Q96NF6 230 aa9.97□□□□□ -0.81
SNRNP48-201ENST00000342415 GAGE12BA1L429 117 aa9.97□□□□□ -0.81
SNRNP48-201ENST00000342415 Q86TA4 180 aa9.97□□□□□ -0.81
SNRNP48-201ENST00000342415 FAM215AQ9Y5M1 114 aa9.97□□□□□ -0.81
SNRNP48-201ENST00000342415 TOMM40O96008 361 aa9.97□□□□□ -0.81
SNRNP48-201ENST00000342415 TDGF1P13385 188 aa9.97□□□□□ -0.81
SNRNP48-201ENST00000342415 DLX6P56179 175 aa9.97□□□□□ -0.81
SNRNP48-201ENST00000342415 NBEAQ8NFP9 2946 aa9.97□□□□□ -0.81
SNRNP48-201ENST00000342415 PATE2Q6UY27 113 aa9.96□□□□□ -0.81
SNRNP48-201ENST00000342415 ORAOV1Q8WV07 137 aa9.96□□□□□ -0.81
SNRNP48-201ENST00000342415 JKAMPQ9P055 326 aa9.96□□□□□ -0.81
SNRNP48-201ENST00000342415 HIVEP3Q5T1R4 2406 aa9.96□□□□□ -0.81
SNRNP48-201ENST00000342415 FABP5P3A8MUU1 101 aa9.96□□□□□ -0.81
SNRNP48-201ENST00000342415 CCL25O15444 150 aa9.96□□□□□ -0.81
SNRNP48-201ENST00000342415 LCNL1Q6ZST4 164 aa9.96□□□□□ -0.81
SNRNP48-201ENST00000342415 OR1N2Q8NGR9 330 aa9.96□□□□□ -0.81
SNRNP48-201ENST00000342415 CIDEAO60543 219 aa9.96□□□□□ -0.82
SNRNP48-201ENST00000342415 APOMO95445 188 aa9.96□□□□□ -0.82
SNRNP48-201ENST00000342415 NDPQ00604 133 aa9.96□□□□□ -0.82
SNRNP48-201ENST00000342415 ZNF672Q499Z4 452 aaPredicted RBP9.96□□□□□ -0.82
SNRNP48-201ENST00000342415 TMEM75Q8N9X5 138 aa9.96□□□□□ -0.82
SNRNP48-201ENST00000342415 P0C879 139 aa9.96□□□□□ -0.82
SNRNP48-201ENST00000342415 SFTPCP11686 197 aa9.96□□□□□ -0.82
SNRNP48-201ENST00000342415 SRD5A1P18405 259 aa9.96□□□□□ -0.82
SNRNP48-201ENST00000342415 DKK4Q9UBT3 224 aa9.96□□□□□ -0.82
SNRNP48-201ENST00000342415 MRPS16Q9Y3D3 137 aaKnown RBP9.96□□□□□ -0.82
SNRNP48-201ENST00000342415 OR11H12B2RN74 326 aa9.95□□□□□ -0.82
SNRNP48-201ENST00000342415 BUB1B-PAK6H3BSN5 160 aa9.95□□□□□ -0.82
SNRNP48-201ENST00000342415 RASL11AQ6T310 242 aa9.95□□□□□ -0.82
SNRNP48-201ENST00000342415 MTURNQ8N3F0 131 aa9.95□□□□□ -0.82
SNRNP48-201ENST00000342415 OR11H1Q8NG94 326 aa9.95□□□□□ -0.82
SNRNP48-201ENST00000342415 OR11H2Q8NH07 326 aa9.95□□□□□ -0.82
SNRNP48-201ENST00000342415 RPS20P60866 119 aaKnown RBP9.95□□□□□ -0.82
SNRNP48-201ENST00000342415 ERCC8Q13216 396 aa9.95□□□□□ -0.82
SNRNP48-201ENST00000342415 OR10J6PQ8NGY7 276 aa9.95□□□□□ -0.82
SNRNP48-201ENST00000342415 SH2D1AO60880 128 aa9.95□□□□□ -0.82
SNRNP48-201ENST00000342415 IGLV3-9A0A075B6K5 115 aa9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 E7EQL1 145 aa9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 PRSS2P07478 247 aa9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 LOXP28300 417 aaPredicted RBP9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 RHOGP84095 191 aa9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 FAM169BQ8N8A8 192 aa9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 RAXQ9Y2V3 346 aa9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 FNDC10F2Z333 226 aa9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 ZNF418Q8TF45 676 aaPredicted RBP9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 DDB2Q92466 427 aa9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 ZNF503Q96F45 646 aa9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 JMJD8Q96S16 334 aa9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 VKORC1Q9BQB6 163 aa9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 TP53TG3Q9ULZ0 132 aa9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 CEACAM8P31997 349 aaPredicted RBP9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 LY6DQ14210 128 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms