RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 RHOBP62745 196 aa12.36□□□□□ -0.43
SFN-201ENST00000339276 SERF2P84101 59 aa12.36□□□□□ -0.43
SFN-201ENST00000339276 LGALSLQ3ZCW2 172 aaPredicted RBP12.36□□□□□ -0.43
SFN-201ENST00000339276 RNF182Q8N6D2 247 aa12.36□□□□□ -0.43
SFN-201ENST00000339276 OR10G4Q8NGN3 311 aa12.36□□□□□ -0.43
SFN-201ENST00000339276 OR10G9Q8NGN4 311 aa12.36□□□□□ -0.43
SFN-201ENST00000339276 OR10G7Q8NGN6 311 aa12.36□□□□□ -0.43
SFN-201ENST00000339276 HYLS1Q96M11 299 aa12.36□□□□□ -0.43
SFN-201ENST00000339276 ZNF471Q9BX82 626 aaPredicted RBP12.36□□□□□ -0.43
SFN-201ENST00000339276 HRH4Q9H3N8 390 aa12.36□□□□□ -0.43
SFN-201ENST00000339276 ZNF586Q9NXT0 402 aa12.36□□□□□ -0.43
SFN-201ENST00000339276 LOC102724200A0A096LPH7 203 aaPredicted RBP12.35□□□□□ -0.43
SFN-201ENST00000339276 HLA-DMBP28068 263 aa12.35□□□□□ -0.43
SFN-201ENST00000339276 HAGHQ16775 308 aa12.35□□□□□ -0.43
SFN-201ENST00000339276 ZFP69Q49AA0 526 aa12.35□□□□□ -0.43
SFN-201ENST00000339276 ACTL10Q5JWF8 245 aa12.35□□□□□ -0.43
SFN-201ENST00000339276 LCN15Q6UWW0 184 aa12.35□□□□□ -0.43
SFN-201ENST00000339276 LRRC20Q8TCA0 184 aa12.35□□□□□ -0.43
SFN-201ENST00000339276 A0A1W2PPV4 95 aa12.34□□□□□ -0.43
SFN-201ENST00000339276 RPP25LQ8N5L8 163 aaKnown RBP12.34□□□□□ -0.43
SFN-201ENST00000339276 SAT2Q96F10 170 aaPredicted RBP12.34□□□□□ -0.43
SFN-201ENST00000339276 ZNF503Q96F45 646 aa12.34□□□□□ -0.43
SFN-201ENST00000339276 SLC50A1Q9BRV3 221 aa12.34□□□□□ -0.43
SFN-201ENST00000339276 OR51M1Q9H341 326 aa12.34□□□□□ -0.43
SFN-201ENST00000339276 ZNF331Q9NQX6 463 aaPredicted RBP12.34□□□□□ -0.43
SFN-201ENST00000339276 AGRNO00468 2067 aa12.33□□□□□ -0.43
SFN-201ENST00000339276 F6UB75 175 aa12.33□□□□□ -0.44
SFN-201ENST00000339276 OR7C2O60412 319 aa12.33□□□□□ -0.44
SFN-201ENST00000339276 MBP02144 154 aa12.33□□□□□ -0.44
SFN-201ENST00000339276 OR10J4P0C629 311 aa12.33□□□□□ -0.44
SFN-201ENST00000339276 HIST1H1EP10412 219 aaKnown RBP12.33□□□□□ -0.44
SFN-201ENST00000339276 SPP1P10451 314 aa12.33□□□□□ -0.44
SFN-201ENST00000339276 CDC34P49427 236 aaPredicted RBP12.33□□□□□ -0.44
SFN-201ENST00000339276 KHDC3LQ587J8 217 aa12.33□□□□□ -0.44
SFN-201ENST00000339276 TMEM41BQ5BJD5 291 aa12.33□□□□□ -0.44
SFN-201ENST00000339276 GDF5OSQ5U4N7 250 aa12.33□□□□□ -0.44
SFN-201ENST00000339276 STHQ8IWL8 128 aa12.33□□□□□ -0.44
SFN-201ENST00000339276 BLNKQ8WV28 456 aa12.33□□□□□ -0.44
SFN-201ENST00000339276 FXYD5Q96DB9 178 aa12.33□□□□□ -0.44
SFN-201ENST00000339276 PAXXQ9BUH6 204 aa12.33□□□□□ -0.44
SFN-201ENST00000339276 RPRMQ9NS64 109 aa12.33□□□□□ -0.44
SFN-201ENST00000339276 TRBV19A0A075B6N1 114 aa12.32□□□□□ -0.44
SFN-201ENST00000339276 HMGB3O15347 200 aaKnown RBP12.32□□□□□ -0.44
SFN-201ENST00000339276 TAS2R45P59539 299 aa12.32□□□□□ -0.44
SFN-201ENST00000339276 GUK1Q16774 197 aa12.32□□□□□ -0.44
SFN-201ENST00000339276 TRPT1Q86TN4 253 aaKnown RBP12.32□□□□□ -0.44
SFN-201ENST00000339276 C9orf62Q8N4C0 152 aa12.32□□□□□ -0.44
SFN-201ENST00000339276 SAV1Q9H4B6 383 aaPredicted RBP12.32□□□□□ -0.44
SFN-201ENST00000339276 NDUFB4O95168 129 aa12.31□□□□□ -0.44
SFN-201ENST00000339276 PRB4P10163 310 aaPredicted RBP12.31□□□□□ -0.44
SFN-201ENST00000339276 HLA-DRB4P13762 266 aa12.31□□□□□ -0.44
SFN-201ENST00000339276 UBE2L3P68036 154 aaKnown RBP12.31□□□□□ -0.44
SFN-201ENST00000339276 FOXI2Q6ZQN5 318 aa12.31□□□□□ -0.44
SFN-201ENST00000339276 SSX7Q7RTT5 188 aa12.31□□□□□ -0.44
SFN-201ENST00000339276 ZNF738Q8NE65 137 aa12.31□□□□□ -0.44
SFN-201ENST00000339276 RNF141Q8WVD5 230 aa12.31□□□□□ -0.44
SFN-201ENST00000339276 HLA-DRB4X5D2U9 266 aa12.31□□□□□ -0.44
SFN-201ENST00000339276 H3BMM0 161 aa12.3□□□□□ -0.44
SFN-201ENST00000339276 ZNF253O75346 499 aa12.3□□□□□ -0.44
SFN-201ENST00000339276 NBEAP1P0C6P0 100 aa12.3□□□□□ -0.44
SFN-201ENST00000339276 APOC4P55056 127 aa12.3□□□□□ -0.44
SFN-201ENST00000339276 PSG3Q16557 428 aa12.3□□□□□ -0.44
SFN-201ENST00000339276 AKR1C8PQ5T2L2 129 aa12.3□□□□□ -0.44
SFN-201ENST00000339276 BAP18Q8IXM2 172 aa12.3□□□□□ -0.44
SFN-201ENST00000339276 RAB24Q969Q5 203 aa12.3□□□□□ -0.44
SFN-201ENST00000339276 TM2D3Q9BRN9 247 aa12.3□□□□□ -0.44
SFN-201ENST00000339276 RETNQ9HD89 108 aa12.3□□□□□ -0.44
SFN-201ENST00000339276 PLA2G2EQ9NZK7 142 aa12.3□□□□□ -0.44
SFN-201ENST00000339276 COL7A1Q02388 2944 aa12.29□□□□□ -0.44
SFN-201ENST00000339276 KIR2DL5BA0A0G2JN68 375 aa12.29□□□□□ -0.44
SFN-201ENST00000339276 KIR2DL5BA0A0G2JPC4 375 aa12.29□□□□□ -0.44
SFN-201ENST00000339276 A0A0J9YX75 114 aa12.29□□□□□ -0.44
SFN-201ENST00000339276 ARL14EPLP0DKL9 152 aa12.29□□□□□ -0.44
SFN-201ENST00000339276 TPT1P13693 172 aaKnown RBP12.29□□□□□ -0.44
SFN-201ENST00000339276 NKX2-5P52952 324 aaPredicted RBP12.29□□□□□ -0.44
SFN-201ENST00000339276 EIF5AP63241 154 aaKnown RBP12.29□□□□□ -0.44
SFN-201ENST00000339276 PDE6HQ13956 83 aa12.29□□□□□ -0.44
SFN-201ENST00000339276 ZNF726P1Q15940 193 aa12.29□□□□□ -0.44
SFN-201ENST00000339276 PQLC2Q6ZP29 291 aa12.29□□□□□ -0.44
SFN-201ENST00000339276 KIR2DL5AQ8N109 375 aa12.29□□□□□ -0.44
SFN-201ENST00000339276 KIR2DL5BQ8NHK3 375 aa12.29□□□□□ -0.44
SFN-201ENST00000339276 STOML3Q8TAV4 291 aa12.29□□□□□ -0.44
SFN-201ENST00000339276 PHYHIPLQ96FC7 376 aa12.29□□□□□ -0.44
SFN-201ENST00000339276 ACTR3CQ9C0K3 210 aaPredicted RBP12.29□□□□□ -0.44
SFN-201ENST00000339276 HUWE1Q7Z6Z7 4374 aaKnown RBP12.28□□□□□ -0.44
SFN-201ENST00000339276 ZNF705FA8MVS1 300 aaPredicted RBP12.28□□□□□ -0.44
SFN-201ENST00000339276 IGKV3-20P01619 116 aa12.28□□□□□ -0.44
SFN-201ENST00000339276 SEC11BP0C7V7 166 aa12.28□□□□□ -0.44
SFN-201ENST00000339276 NHLRC4P0CG21 123 aaPredicted RBP12.28□□□□□ -0.44
SFN-201ENST00000339276 ZNF705DP0CH99 300 aaPredicted RBP12.28□□□□□ -0.44
SFN-201ENST00000339276 ZNF705BP0CI00 300 aaPredicted RBP12.28□□□□□ -0.44
SFN-201ENST00000339276 STAG3L2P0CL84 134 aa12.28□□□□□ -0.44
SFN-201ENST00000339276 STAG3L3P0CL85 134 aa12.28□□□□□ -0.44
SFN-201ENST00000339276 EBLN2Q6P2I7 272 aa12.28□□□□□ -0.44
SFN-201ENST00000339276 EXOC3-AS1Q8N2X6 119 aa12.28□□□□□ -0.44
SFN-201ENST00000339276 RPUSD4Q96CM3 377 aaKnown RBP12.28□□□□□ -0.44
SFN-201ENST00000339276 CSTL1Q9H114 145 aa12.28□□□□□ -0.44
SFN-201ENST00000339276 TGP01266 2768 aa12.28□□□□□ -0.44
SFN-201ENST00000339276 PSG9Q00887 426 aa12.27□□□□□ -0.45
SFN-201ENST00000339276 OR4B1Q8NGF8 309 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms