RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 CSN1S1P47710 185 aa12.53□□□□□ -0.4
HPS1-202ENST00000338546 SLC35B1P78383 322 aa12.53□□□□□ -0.4
HPS1-202ENST00000338546 RPEL1Q2QD12 228 aa12.53□□□□□ -0.4
HPS1-202ENST00000338546 C17orf77Q96MU5 243 aa12.53□□□□□ -0.4
HPS1-202ENST00000338546 KLK15Q9H2R5 256 aa12.53□□□□□ -0.4
HPS1-202ENST00000338546 ZFP30Q9Y2G7 519 aa12.53□□□□□ -0.4
HPS1-202ENST00000338546 CSMD2Q7Z408 3487 aa12.53□□□□□ -0.4
HPS1-202ENST00000338546 CD5LO43866 347 aa12.52□□□□□ -0.4
HPS1-202ENST00000338546 S100A6P06703 90 aa12.52□□□□□ -0.4
HPS1-202ENST00000338546 TMEM183AQ8IXX5 376 aa12.52□□□□□ -0.4
HPS1-202ENST00000338546 Q8N2B8 174 aa12.52□□□□□ -0.4
HPS1-202ENST00000338546 CIARTQ8N365 385 aaPredicted RBP12.52□□□□□ -0.4
HPS1-202ENST00000338546 OR4X2Q8NGF9 303 aa12.52□□□□□ -0.4
HPS1-202ENST00000338546 CLEC5AQ9NY25 188 aa12.52□□□□□ -0.4
HPS1-202ENST00000338546 ZNF492Q9P255 531 aa12.52□□□□□ -0.4
HPS1-202ENST00000338546 SMAD5-AS1Q9Y6J3 95 aa12.52□□□□□ -0.4
HPS1-202ENST00000338546 IGHV3-35A0A0C4DH35 117 aa12.52□□□□□ -0.41
HPS1-202ENST00000338546 DIRC3C9JPN6 131 aa12.52□□□□□ -0.41
HPS1-202ENST00000338546 SLC17A3O00476 420 aa12.52□□□□□ -0.41
HPS1-202ENST00000338546 ELANEP08246 267 aa12.52□□□□□ -0.41
HPS1-202ENST00000338546 RPL15P61313 204 aaKnown RBP12.52□□□□□ -0.41
HPS1-202ENST00000338546 ZFP82Q8N141 532 aa12.52□□□□□ -0.41
HPS1-202ENST00000338546 SLC50A1Q9BRV3 221 aa12.52□□□□□ -0.41
HPS1-202ENST00000338546 IGLV2-11P01706 119 aa12.51□□□□□ -0.41
HPS1-202ENST00000338546 FOXE3Q13461 319 aa12.51□□□□□ -0.41
HPS1-202ENST00000338546 GOLT1AQ6ZVE7 132 aa12.51□□□□□ -0.41
HPS1-202ENST00000338546 Q86TA4 180 aa12.51□□□□□ -0.41
HPS1-202ENST00000338546 ZNF702PQ9H963 129 aa12.51□□□□□ -0.41
HPS1-202ENST00000338546 RPH3ALQ9UNE2 315 aa12.51□□□□□ -0.41
HPS1-202ENST00000338546 NBPF19A0A087WUL8 3843 aa12.5□□□□□ -0.41
HPS1-202ENST00000338546 ZNF785A8K8V0 405 aa12.5□□□□□ -0.41
HPS1-202ENST00000338546 TRGC2P03986 189 aa12.5□□□□□ -0.41
HPS1-202ENST00000338546 PSG3Q16557 428 aa12.5□□□□□ -0.41
HPS1-202ENST00000338546 COX19Q49B96 90 aa12.5□□□□□ -0.41
HPS1-202ENST00000338546 SIGLECL1Q8N7X8 197 aa12.5□□□□□ -0.41
HPS1-202ENST00000338546 RNF152Q8N8N0 203 aa12.5□□□□□ -0.41
HPS1-202ENST00000338546 RNASE7Q9H1E1 156 aaKnown RBP12.5□□□□□ -0.41
HPS1-202ENST00000338546 ZNF331Q9NQX6 463 aaPredicted RBP12.5□□□□□ -0.41
HPS1-202ENST00000338546 PEF1Q9UBV8 284 aaKnown RBP12.5□□□□□ -0.41
HPS1-202ENST00000338546 SMIM27A0A1W2PRY6 76 aa12.49□□□□□ -0.41
HPS1-202ENST00000338546 A0A1W2PS18 150 aa12.49□□□□□ -0.41
HPS1-202ENST00000338546 ZNF320A2RRD8 509 aa12.49□□□□□ -0.41
HPS1-202ENST00000338546 C5orf52A6NGY3 159 aa12.49□□□□□ -0.41
HPS1-202ENST00000338546 ZNF705GA8MUZ8 300 aaPredicted RBP12.49□□□□□ -0.41
HPS1-202ENST00000338546 PHOX2AO14813 284 aa12.49□□□□□ -0.41
HPS1-202ENST00000338546 SMAD7O15105 426 aaKnown RBP12.49□□□□□ -0.41
HPS1-202ENST00000338546 GATCO43716 136 aaKnown RBP12.49□□□□□ -0.41
HPS1-202ENST00000338546 CT83Q5H943 113 aa12.49□□□□□ -0.41
HPS1-202ENST00000338546 C16orf54Q6UWD8 224 aa12.49□□□□□ -0.41
HPS1-202ENST00000338546 GRAMD2BQ96HH9 432 aa12.49□□□□□ -0.41
HPS1-202ENST00000338546 K7EMT4 169 aa12.48□□□□□ -0.41
HPS1-202ENST00000338546 SCGB2A2Q13296 93 aa12.48□□□□□ -0.41
HPS1-202ENST00000338546 NUDT10Q8NFP7 164 aa12.48□□□□□ -0.41
HPS1-202ENST00000338546 MYOZ3Q8TDC0 251 aa12.48□□□□□ -0.41
HPS1-202ENST00000338546 MRPL53Q96EL3 112 aaKnown RBP12.48□□□□□ -0.41
HPS1-202ENST00000338546 NUDT11Q96G61 164 aa12.48□□□□□ -0.41
HPS1-202ENST00000338546 PSG8Q9UQ74 426 aa12.48□□□□□ -0.41
HPS1-202ENST00000338546 IGHV3OR16-8A0A075B7F1 116 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 TRBV12-3P01733 135 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 IGHV3-11P01762 117 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 TMEM95Q3KNT9 176 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 GPHB5Q86YW7 130 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 NHLRC2Q8NBF2 726 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 ITPR3Q14573 2671 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 C19orf71A6NCJ1 209 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 KRTAP1-1Q07627 177 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 FAM106AQ4KMX7 169 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 ACTL10Q5JWF8 245 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 COX8CQ7Z4L0 72 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 OR4B1Q8NGF8 309 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 GLMPQ8WWB7 406 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 SERTAD4Q9NUC0 356 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 ZANQ9Y493 2812 aa12.47□□□□□ -0.41
HPS1-202ENST00000338546 RBAKDNA6NC62 111 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 M0R3E3 92 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 UBE2CO00762 179 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 HIST1H2BKO60814 126 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 HIST1H2BJP06899 126 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 HIST1H2BOP23527 126 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 HIST1H2BBP33778 126 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 HIST1H2BDP58876 126 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 HIST1H2BCP62807 126 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 HIST2H2BEQ16778 126 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.46□□□□□ -0.42
HPS1-202ENST00000338546 SAPCD1Q5SSQ6 148 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 PRNTQ86SH4 94 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 HIST1H2BHQ93079 126 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 DAZAP1Q96EP5 407 aaKnown RBP12.46□□□□□ -0.42
HPS1-202ENST00000338546 UBE2E2Q96LR5 201 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 HIST1H2BNQ99877 126 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 HIST1H2BMQ99879 126 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 TMEM160Q9NX00 188 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 CSMD1Q96PZ7 3565 aa12.46□□□□□ -0.42
HPS1-202ENST00000338546 CELSR1Q9NYQ6 3014 aa12.45□□□□□ -0.42
HPS1-202ENST00000338546 FAM231BA6NCW3 169 aa12.45□□□□□ -0.42
HPS1-202ENST00000338546 CHEK1O14757 476 aa12.45□□□□□ -0.42
HPS1-202ENST00000338546 APOHP02749 345 aaPredicted RBP12.45□□□□□ -0.42
HPS1-202ENST00000338546 TRGC1P0CF51 173 aa12.45□□□□□ -0.42
HPS1-202ENST00000338546 SNRPEP62304 92 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms