RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 TRBV10-2A0A0K0K1G8 114 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 H7C1H1 209 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 WISP2O76076 250 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 LINC00643Q86TS7 51 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 LINC00596Q86U02 117 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 MKXQ8IYA7 352 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 FOXC2Q99958 501 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 KIAA1549LQ6ZVL6 1849 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 IGLV2-14P01704 120 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 CDAP32320 146 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 FGF12P61328 243 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 FAM19A4Q96LR4 140 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 DSCR8Q96T75 97 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 SHANK2-AS3Q9BTD1 123 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 ADAMTS9Q9P2N4 1935 aa6.82□□□□□ -1.32
TDP1-201ENST00000335725 HEATR1Q9H583 2144 aaKnown RBP6.82□□□□□ -1.32
TDP1-201ENST00000335725 A0A1W2PQD3 144 aa6.82□□□□□ -1.32
TDP1-201ENST00000335725 SPINK9Q5DT21 86 aa6.82□□□□□ -1.32
TDP1-201ENST00000335725 MDP1Q86V88 176 aa6.82□□□□□ -1.32
TDP1-201ENST00000335725 ZNF524Q96C55 264 aa6.82□□□□□ -1.32
TDP1-201ENST00000335725 DYSFO75923 2080 aa6.82□□□□□ -1.32
TDP1-201ENST00000335725 TEX49A0A1B0GTD5 131 aa6.82□□□□□ -1.32
TDP1-201ENST00000335725 Q6ZT83 130 aa6.82□□□□□ -1.32
TDP1-201ENST00000335725 FMC1Q96HJ9 113 aa6.82□□□□□ -1.32
TDP1-201ENST00000335725 U3KQK5 164 aa6.82□□□□□ -1.32
TDP1-201ENST00000335725 COL4A2P08572 1712 aa6.82□□□□□ -1.32
TDP1-201ENST00000335725 PGPA6NDG6 321 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 NDUFC2-KCTD14E9PQ53 114 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 ZNF561-AS1K7EIQ3 104 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 MRPS12O15235 138 aaKnown RBP6.81□□□□□ -1.32
TDP1-201ENST00000335725 P0DMU3 169 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 FAM231AP0DMU4 169 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 FAM231CP0DMU5 169 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 LINC01620Q4KN68 170 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 ZNF329Q86UD4 541 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 PLPPR2Q96GM1 343 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 COX14Q96I36 57 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 TMEM74BQ9NUR3 256 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 C5orf63A6NC05 138 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 D6R8Y8 96 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 PRSS46E5RG02 174 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 PYYP10082 97 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 ASPHD1Q5U4P2 390 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 SCGB1D4Q6XE38 83 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 SAP25Q8TEE9 199 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 TSACCQ96A04 125 aaPredicted RBP6.81□□□□□ -1.32
TDP1-201ENST00000335725 PRO1854Q9UHT4 67 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 TRAV40A0A0B4J280 105 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 LINC00271P0C7V0 271 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 PSMB8P28062 276 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 NBL1P41271 181 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 CEMP1Q6PRD7 247 aaPredicted RBP6.81□□□□□ -1.32
TDP1-201ENST00000335725 APRG1Q8IVJ8 170 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 C2orf48Q96LS8 159 aa6.81□□□□□ -1.32
TDP1-201ENST00000335725 H3BT86 120 aa6.8□□□□□ -1.32
TDP1-201ENST00000335725 DLL1O00548 723 aa6.8□□□□□ -1.32
TDP1-201ENST00000335725 OXTP01178 125 aa6.8□□□□□ -1.32
TDP1-201ENST00000335725 PAX8Q06710 450 aa6.8□□□□□ -1.32
TDP1-201ENST00000335725 PCSK5Q92824 1860 aa6.8□□□□□ -1.32
TDP1-201ENST00000335725 PTPRBP23467 1997 aa6.8□□□□□ -1.32
TDP1-201ENST00000335725 NXPH1P58417 271 aa6.8□□□□□ -1.32
TDP1-201ENST00000335725 CCL8P80075 99 aa6.8□□□□□ -1.32
TDP1-201ENST00000335725 FGFBP3Q8TAT2 258 aa6.8□□□□□ -1.32
TDP1-201ENST00000335725 LY6LH3BQJ8 138 aa6.8□□□□□ -1.32
TDP1-201ENST00000335725 MYCNOSP40205 109 aa6.8□□□□□ -1.32
TDP1-201ENST00000335725 C2orf82Q6UX34 121 aa6.8□□□□□ -1.32
TDP1-201ENST00000335725 TANC2Q9HCD6 1990 aa6.79□□□□□ -1.32
TDP1-201ENST00000335725 ZNF785A8K8V0 405 aa6.79□□□□□ -1.32
TDP1-201ENST00000335725 ADM5C9JUS6 153 aa6.79□□□□□ -1.32
TDP1-201ENST00000335725 HSPB6O14558 160 aa6.79□□□□□ -1.32
TDP1-201ENST00000335725 TIRAPP58753 221 aa6.79□□□□□ -1.32
TDP1-201ENST00000335725 NPC2P61916 151 aa6.79□□□□□ -1.32
TDP1-201ENST00000335725 DEFB121Q5J5C9 76 aa6.79□□□□□ -1.32
TDP1-201ENST00000335725 SNRNP200O75643 2136 aaKnown RBP6.79□□□□□ -1.32
TDP1-201ENST00000335725 ERVK-16P61578 105 aa6.79□□□□□ -1.32
TDP1-201ENST00000335725 WFDC3Q8IUB2 231 aa6.79□□□□□ -1.32
TDP1-201ENST00000335725 PAXXQ9BUH6 204 aa6.79□□□□□ -1.32
TDP1-201ENST00000335725 AGRNO00468 2067 aa6.79□□□□□ -1.32
TDP1-201ENST00000335725 LEPP41159 167 aa6.79□□□□□ -1.32
TDP1-201ENST00000335725 FAM90A1Q86YD7 464 aa6.79□□□□□ -1.32
TDP1-201ENST00000335725 TRAV12-2A0A075B6T6 113 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 PRNPP04156 253 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 SSR4P51571 173 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 FAM104BQ5XKR9 115 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 MDS2Q8NDY4 140 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 DPH3P1Q9H4G8 78 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 FRG2CA6NGY1 282 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 INS-IGF2F8WCM5 200 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 H0YGG7 62 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 GFRA3O60609 400 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 ARMS2P0C7Q2 107 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 IGLV3-21P80748 117 aaPredicted RBP6.78□□□□□ -1.32
TDP1-201ENST00000335725 TMEM89A2RUT3 159 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 CKS2P33552 79 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 FXYD7P58549 80 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 MYO7BQ6PIF6 2116 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 SERP2Q8N6R1 65 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 COPS9Q8WXC6 57 aa6.78□□□□□ -1.32
TDP1-201ENST00000335725 TRGV8A0A0C4DH27 118 aa6.77□□□□□ -1.33
TDP1-201ENST00000335725 COL8A2P25067 703 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms