RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 IGLL1P15814 213 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 MIR17HGQ75NE6 70 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 CLECL1Q8IZS7 167 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 LYG1Q8N1E2 194 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 H1FXQ92522 213 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 UBE2D4Q9Y2X8 147 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 CUL9Q8IWT3 2517 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 TCRBV5S2A0A599 114 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 C3orf79P0CE67 100 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 PEBP1P30086 187 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 MORN5Q5VZ52 161 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 TJP1Q07157 1748 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 PRR33A8MZF0 331 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 C18orf12Q96KH6 178 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 IGHV1-58A0A0C4DH39 117 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 HAX1O00165 279 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 PRSS23O95084 383 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 LIFP15018 202 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 SARAFQ96BY9 339 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 PPIL1Q9Y3C6 166 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 PI3P19957 117 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 C10orf91Q5T1B1 145 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 PAX4O43316 350 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 RPL18AQ02543 176 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 SMRP1Q8NCR6 262 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 J3QLI3 93 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 EDIL3O43854 480 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 SMKR1H3BMG3 65 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 SNRPD3P62318 126 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 ZMAT4Q9H898 229 aa5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 LOXL1Q08397 574 aaPredicted RBP5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 MRPS18AQ9NVS2 196 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-201ENST00000334218 TRAV26-2A0A0B4J265 109 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 C5orf67F2Z3F1 127 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 PRIMA1Q86XR5 153 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 DAND5Q8N907 189 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 TMEM52Q8NDY8 209 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 C4orf45Q96LM5 186 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 PNRC2Q9NPJ4 139 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 DLL3Q9NYJ7 618 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 ZNF79Q15937 498 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 GATA1P15976 413 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 LINC00479Q96M42 142 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 SLC50A1Q9BRV3 221 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 A0A087WV48 116 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 IGFBP3P17936 291 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 ICAM4Q14773 271 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 CYTL1Q9NRR1 136 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 A0A0A6YYD5 115 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 A0A0B4J2E0 115 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 A0A1B0GX12 115 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 H0YIZ8 118 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 TRBV12-3P01733 135 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 BCORQ6W2J9 1755 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 C14orf132Q9NPU4 83 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 LY75O60449 1722 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 IGLC6P0CF74 106 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 REG4Q9BYZ8 158 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 SAA2-SAA4A0A096LPE2 208 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 METTL12A8MUP2 240 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 SAA2P0DJI9 122 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 SHISA5Q8N114 240 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 PILRAQ9UKJ1 303 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 PRR32B1ATL7 298 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 ZNF876PQ49A33 203 aa5.01□□□□□ -1.61
CDC42BPA-201ENST00000334218 J3QT63 122 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 DIAPH2-AS1Q14236 149 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 C12orf74Q32Q52 190 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 REPIN1Q9BWE0 567 aaKnown RBP5□□□□□ -1.61
CDC42BPA-201ENST00000334218 SP6Q3SY56 376 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 KIAA1551Q9HCM1 1747 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 TRBV10-2A0A0K0K1G8 114 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 LOC107984640A0A0U1RRK4 108 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 PEAR1Q5VY43 1037 aaPredicted RBP5□□□□□ -1.61
CDC42BPA-201ENST00000334218 SLC25A45Q8N413 288 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 PRR31Q5SQ13 230 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 LRP5O75197 1615 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 C4orf3Q8WVX3 66 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 KLK9Q9UKQ9 250 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 C2CD4DB7Z1M9 353 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 CLEC2BQ92478 149 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 A0A0G2JMZ2 1700 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 LRRC37A2A6NM11 1700 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 LRRC37AA6NMS7 1700 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 BAALC-AS2P0C853 105 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 C1orf61Q13536 156 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 PCOLCEQ15113 449 aa5□□□□□ -1.61
CDC42BPA-201ENST00000334218 KLF16Q9BXK1 252 aaPredicted RBP5□□□□□ -1.61
CDC42BPA-201ENST00000334218 BRWD3Q6RI45 1802 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 RBX1P62877 108 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 GLIS3Q8NEA6 775 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 LINC00526Q96FQ7 95 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 KLK15Q9H2R5 256 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 ZDBF2Q9HCK1 2354 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 WIPF1O43516 503 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 CXCL13O43927 109 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 MORN4Q8NDC4 146 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 CD7P09564 240 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 LINC00158P58513 81 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 HIGD2BQ4VC39 106 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms