RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 TANC2Q9HCD6 1990 aa14.38□□□□□ -0.11
CLSTN3-202ENST00000331148 LOC389332A0A1B0GUA5 103 aa14.38□□□□□ -0.11
CLSTN3-202ENST00000331148 A0A1W2PPI3 338 aa14.38□□□□□ -0.11
CLSTN3-202ENST00000331148 DSCAMO60469 2012 aa14.38□□□□□ -0.11
CLSTN3-202ENST00000331148 A0A0G2JNJ9 132 aa14.38□□□□□ -0.11
CLSTN3-202ENST00000331148 TEX48A0A1B0GUV7 120 aa14.38□□□□□ -0.11
CLSTN3-202ENST00000331148 RPL24P83731 157 aaKnown RBP14.38□□□□□ -0.11
CLSTN3-202ENST00000331148 SAMD5Q5TGI4 173 aa14.38□□□□□ -0.11
CLSTN3-202ENST00000331148 EXOC3-AS1Q8N2X6 119 aa14.38□□□□□ -0.11
CLSTN3-202ENST00000331148 RNF7Q9UBF6 113 aa14.38□□□□□ -0.11
CLSTN3-202ENST00000331148 Q9UFV3 132 aa14.38□□□□□ -0.11
CLSTN3-202ENST00000331148 SH3BGRL2Q9UJC5 107 aa14.38□□□□□ -0.11
CLSTN3-202ENST00000331148 DSPP15924 2871 aaKnown RBP14.37□□□□□ -0.11
CLSTN3-202ENST00000331148 PPIAL4CA0A0B4J2A2 164 aa14.37□□□□□ -0.11
CLSTN3-202ENST00000331148 NMUP48645 174 aa14.37□□□□□ -0.11
CLSTN3-202ENST00000331148 OR4C13Q8NGP0 309 aa14.37□□□□□ -0.11
CLSTN3-202ENST00000331148 C8orf46Q8TAG6 207 aa14.37□□□□□ -0.11
CLSTN3-202ENST00000331148 ZNF414Q96IQ9 312 aa14.37□□□□□ -0.11
CLSTN3-202ENST00000331148 TRBV6-1A0A0K0K1D8 114 aa14.36□□□□□ -0.11
CLSTN3-202ENST00000331148 D6R8Y8 96 aa14.36□□□□□ -0.11
CLSTN3-202ENST00000331148 IGLV2-23P01705 113 aa14.36□□□□□ -0.11
CLSTN3-202ENST00000331148 SCGB1A1P11684 91 aa14.36□□□□□ -0.11
CLSTN3-202ENST00000331148 TPPP3Q9BW30 176 aa14.36□□□□□ -0.11
CLSTN3-202ENST00000331148 F11RQ9Y624 299 aaKnown RBP14.36□□□□□ -0.11
CLSTN3-202ENST00000331148 DYSFO75923 2080 aa14.36□□□□□ -0.11
CLSTN3-202ENST00000331148 TM4SF20Q53R12 229 aa14.36□□□□□ -0.11
CLSTN3-202ENST00000331148 HCP5Q6MZN7 132 aa14.36□□□□□ -0.11
CLSTN3-202ENST00000331148 ZNF788Q6ZQV5 615 aa14.36□□□□□ -0.11
CLSTN3-202ENST00000331148 ZNF493Q6ZR52 646 aa14.36□□□□□ -0.11
CLSTN3-202ENST00000331148 NDUFS8O00217 210 aa14.35□□□□□ -0.11
CLSTN3-202ENST00000331148 AZU1P20160 251 aa14.35□□□□□ -0.11
CLSTN3-202ENST00000331148 FAM27E3Q08E93 113 aa14.35□□□□□ -0.11
CLSTN3-202ENST00000331148 KLRB1Q12918 225 aa14.35□□□□□ -0.11
CLSTN3-202ENST00000331148 TPSG1Q9NRR2 321 aa14.35□□□□□ -0.11
CLSTN3-202ENST00000331148 HIGD1AQ9Y241 93 aa14.35□□□□□ -0.11
CLSTN3-202ENST00000331148 U3KQK5 164 aa14.35□□□□□ -0.11
CLSTN3-202ENST00000331148 NAV3Q8IVL0 2385 aa14.35□□□□□ -0.11
CLSTN3-202ENST00000331148 HBDP02042 147 aa14.35□□□□□ -0.11
CLSTN3-202ENST00000331148 SMIM13P0DJ93 91 aa14.35□□□□□ -0.11
CLSTN3-202ENST00000331148 FCGR2BP31994 310 aaPredicted RBP14.35□□□□□ -0.11
CLSTN3-202ENST00000331148 GATA4P43694 442 aa14.35□□□□□ -0.11
CLSTN3-202ENST00000331148 FXYD7P58549 80 aa14.35□□□□□ -0.11
CLSTN3-202ENST00000331148 Q6AWC8 147 aa14.35□□□□□ -0.11
CLSTN3-202ENST00000331148 ASCL2Q99929 193 aa14.35□□□□□ -0.11
CLSTN3-202ENST00000331148 LINC00312Q9Y6C7 94 aa14.35□□□□□ -0.11
CLSTN3-202ENST00000331148 IGHV3-21A0A0B4J1V1 117 aa14.34□□□□□ -0.11
CLSTN3-202ENST00000331148 TMEM189A5PLL7 270 aa14.34□□□□□ -0.11
CLSTN3-202ENST00000331148 PRELID3AQ96N28 172 aa14.34□□□□□ -0.11
CLSTN3-202ENST00000331148 GTSF1LQ9H1H1 148 aa14.34□□□□□ -0.11
CLSTN3-202ENST00000331148 RP1L1Q8IWN7 2480 aaPredicted RBP14.34□□□□□ -0.11
CLSTN3-202ENST00000331148 DIAPH2-AS1Q14236 149 aa14.34□□□□□ -0.11
CLSTN3-202ENST00000331148 PVRIGQ6DKI7 326 aa14.34□□□□□ -0.11
CLSTN3-202ENST00000331148 IFI27L1Q96BM0 104 aa14.34□□□□□ -0.11
CLSTN3-202ENST00000331148 TMEM14CQ9P0S9 112 aa14.34□□□□□ -0.11
CLSTN3-202ENST00000331148 RAI1Q7Z5J4 1906 aaPredicted RBP14.33□□□□□ -0.12
CLSTN3-202ENST00000331148 SERTM2A0A1B0GWG4 89 aa14.33□□□□□ -0.12
CLSTN3-202ENST00000331148 M0R1B8 84 aa14.33□□□□□ -0.12
CLSTN3-202ENST00000331148 SLC25A17O43808 307 aa14.33□□□□□ -0.12
CLSTN3-202ENST00000331148 PAX8Q06710 450 aa14.33□□□□□ -0.12
CLSTN3-202ENST00000331148 C3orf36Q3SXR2 165 aa14.33□□□□□ -0.12
CLSTN3-202ENST00000331148 TMEM75Q8N9X5 138 aa14.33□□□□□ -0.12
CLSTN3-202ENST00000331148 SIGMAR1Q99720 223 aa14.32□□□□□ -0.12
CLSTN3-202ENST00000331148 HEATR1Q9H583 2144 aaKnown RBP14.32□□□□□ -0.12
CLSTN3-202ENST00000331148 TNFRSF1AP19438 455 aa14.32□□□□□ -0.12
CLSTN3-202ENST00000331148 GCSHP23434 173 aa14.32□□□□□ -0.12
CLSTN3-202ENST00000331148 FXYD2P54710 66 aa14.32□□□□□ -0.12
CLSTN3-202ENST00000331148 LYZP61626 148 aa14.32□□□□□ -0.12
CLSTN3-202ENST00000331148 PSG3Q16557 428 aa14.32□□□□□ -0.12
CLSTN3-202ENST00000331148 MRGPRG-AS1Q2M3A8 158 aa14.32□□□□□ -0.12
CLSTN3-202ENST00000331148 ORMDL3Q8N138 153 aa14.32□□□□□ -0.12
CLSTN3-202ENST00000331148 CCL3L1P16619 93 aa14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 CRIP1P50238 77 aa14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 VMA21Q3ZAQ7 101 aa14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 FAM104BQ5XKR9 115 aa14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 AMN1Q8IY45 258 aa14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 SLC25A39Q9BZJ4 359 aaPredicted RBP14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 TLN1Q9Y490 2541 aaKnown RBP14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 PPIAL4EA0A075B759 164 aa14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 TMEM213A2RRL7 107 aa14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 CT45A10P0DMU9 189 aa14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 PPIAL4FP0DN26 164 aa14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 TNFAIP6P98066 277 aaPredicted RBP14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 SMAGPQ0VAQ4 97 aa14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 BCL6BQ8N143 479 aaPredicted RBP14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 C18orf15Q96N68 181 aa14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 VKORC1Q9BQB6 163 aa14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 DKK2Q9UBU2 259 aa14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 SMPXQ9UHP9 88 aa14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 PSG8Q9UQ74 426 aa14.31□□□□□ -0.12
CLSTN3-202ENST00000331148 C16orf97H3BN30 126 aa14.3□□□□□ -0.12
CLSTN3-202ENST00000331148 CACNA1AO00555 2505 aa14.3□□□□□ -0.12
CLSTN3-202ENST00000331148 K7ERJ3 54 aa14.3□□□□□ -0.12
CLSTN3-202ENST00000331148 NDUFS7O75251 213 aa14.3□□□□□ -0.12
CLSTN3-202ENST00000331148 PRB4P10163 310 aaPredicted RBP14.3□□□□□ -0.12
CLSTN3-202ENST00000331148 SVIPQ8NHG7 77 aa14.3□□□□□ -0.12
CLSTN3-202ENST00000331148 VGLL1Q99990 258 aa14.3□□□□□ -0.12
CLSTN3-202ENST00000331148 IGLV3-9A0A075B6K5 115 aa14.29□□□□□ -0.12
CLSTN3-202ENST00000331148 APELAP0DMC3 54 aa14.29□□□□□ -0.12
CLSTN3-202ENST00000331148 GLRXP35754 106 aa14.29□□□□□ -0.12
CLSTN3-202ENST00000331148 LYZL1Q6UWQ5 148 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms