RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 CCL18P55774 89 aa17.57■□□□□ 0.4
PPP4R4-202ENST00000328839 TAS2R60P59551 318 aa17.57■□□□□ 0.4
PPP4R4-202ENST00000328839 TNP2Q05952 138 aa17.57■□□□□ 0.4
PPP4R4-202ENST00000328839 C16orf74Q96GX8 76 aa17.57■□□□□ 0.4
PPP4R4-202ENST00000328839 ABCA13Q86UQ4 5058 aa17.57■□□□□ 0.4
PPP4R4-202ENST00000328839 CBY3A6NI87 242 aa17.56■□□□□ 0.4
PPP4R4-202ENST00000328839 PMS2P5A8MQ11 134 aa17.56■□□□□ 0.4
PPP4R4-202ENST00000328839 DLK1P80370 383 aa17.56■□□□□ 0.4
PPP4R4-202ENST00000328839 ZNRF2Q8NHG8 242 aa17.56■□□□□ 0.4
PPP4R4-202ENST00000328839 RPUSD4Q96CM3 377 aaKnown RBP17.56■□□□□ 0.4
PPP4R4-202ENST00000328839 SMIM8Q96KF7 97 aa17.56■□□□□ 0.4
PPP4R4-202ENST00000328839 MGAT4CQ9UBM8 478 aa17.56■□□□□ 0.4
PPP4R4-202ENST00000328839 C16orf90A8MZG2 172 aa17.55■□□□□ 0.4
PPP4R4-202ENST00000328839 SLC38A11Q08AI6 406 aa17.55■□□□□ 0.4
PPP4R4-202ENST00000328839 CCDC190Q86UF4 302 aa17.55■□□□□ 0.4
PPP4R4-202ENST00000328839 C6orf223Q8N319 242 aa17.55■□□□□ 0.4
PPP4R4-202ENST00000328839 ARV1Q9H2C2 271 aa17.55■□□□□ 0.4
PPP4R4-202ENST00000328839 NPVFQ9HCQ7 196 aa17.55■□□□□ 0.4
PPP4R4-202ENST00000328839 TIMM8BQ9Y5J9 83 aaPredicted RBP17.55■□□□□ 0.4
PPP4R4-202ENST00000328839 SNRPCP09234 159 aaKnown RBP17.54■□□□□ 0.4
PPP4R4-202ENST00000328839 CDKN1BP46527 198 aa17.54■□□□□ 0.4
PPP4R4-202ENST00000328839 CLINT1Q14677 625 aa17.54■□□□□ 0.4
PPP4R4-202ENST00000328839 TEPPQ6URK8 271 aa17.54■□□□□ 0.4
PPP4R4-202ENST00000328839 PATE2Q6UY27 113 aa17.54■□□□□ 0.4
PPP4R4-202ENST00000328839 OR10P1Q8NGE3 313 aa17.54■□□□□ 0.4
PPP4R4-202ENST00000328839 RNF141Q8WVD5 230 aa17.54■□□□□ 0.4
PPP4R4-202ENST00000328839 NOP10Q9NPE3 64 aaKnown RBP17.54■□□□□ 0.4
PPP4R4-202ENST00000328839 FLVCR2Q9UPI3 526 aa17.54■□□□□ 0.4
PPP4R4-202ENST00000328839 TMEM14EPQ6UXP3 125 aa17.53■□□□□ 0.4
PPP4R4-202ENST00000328839 RNF24Q9Y225 148 aa17.53■□□□□ 0.4
PPP4R4-202ENST00000328839 LINC00588Q9Y4M8 146 aa17.53■□□□□ 0.4
PPP4R4-202ENST00000328839 GOSR2O14653 212 aa17.52■□□□□ 0.4
PPP4R4-202ENST00000328839 NDUFB6O95139 128 aa17.52■□□□□ 0.4
PPP4R4-202ENST00000328839 OR4E1P0C645 316 aa17.52■□□□□ 0.4
PPP4R4-202ENST00000328839 SPANXN2Q5MJ10 180 aa17.52■□□□□ 0.4
PPP4R4-202ENST00000328839 LCN15Q6UWW0 184 aa17.52■□□□□ 0.4
PPP4R4-202ENST00000328839 KRTAP4-5Q9BYR2 181 aa17.52■□□□□ 0.4
PPP4R4-202ENST00000328839 C4orf46Q504U0 113 aa17.51■□□□□ 0.39
PPP4R4-202ENST00000328839 TRIQKQ629K1 86 aa17.51■□□□□ 0.39
PPP4R4-202ENST00000328839 ZNF493Q6ZR52 646 aa17.51■□□□□ 0.39
PPP4R4-202ENST00000328839 LINC00305Q7Z4B0 112 aa17.51■□□□□ 0.39
PPP4R4-202ENST00000328839 TMEM263Q8WUH6 116 aaKnown RBP17.51■□□□□ 0.39
PPP4R4-202ENST00000328839 SRRQ9GZT4 340 aa17.51■□□□□ 0.39
PPP4R4-202ENST00000328839 LINC00854A0A1B0GVQ3 168 aa17.5■□□□□ 0.39
PPP4R4-202ENST00000328839 NAP1L6A6NFF2 107 aa17.5■□□□□ 0.39
PPP4R4-202ENST00000328839 FNDC10F2Z333 226 aa17.5■□□□□ 0.39
PPP4R4-202ENST00000328839 MRPS12O15235 138 aaKnown RBP17.5■□□□□ 0.39
PPP4R4-202ENST00000328839 CXCL2P19875 107 aa17.5■□□□□ 0.39
PPP4R4-202ENST00000328839 OR5I1Q13606 314 aa17.5■□□□□ 0.39
PPP4R4-202ENST00000328839 IAH1Q2TAA2 248 aaPredicted RBP17.5■□□□□ 0.39
PPP4R4-202ENST00000328839 SSX7Q7RTT5 188 aa17.5■□□□□ 0.39
PPP4R4-202ENST00000328839 ZNF546Q86UE3 836 aa17.5■□□□□ 0.39
PPP4R4-202ENST00000328839 RNASE8Q8TDE3 154 aaKnown RBP17.5■□□□□ 0.39
PPP4R4-202ENST00000328839 SLC50A1Q9BRV3 221 aa17.5■□□□□ 0.39
PPP4R4-202ENST00000328839 PARD6GQ9BYG4 376 aaPredicted RBP17.5■□□□□ 0.39
PPP4R4-202ENST00000328839 ZNF331Q9NQX6 463 aaPredicted RBP17.5■□□□□ 0.39
PPP4R4-202ENST00000328839 GSKIPQ9P0R6 139 aa17.5■□□□□ 0.39
PPP4R4-202ENST00000328839 H3BTX0 84 aa17.49■□□□□ 0.39
PPP4R4-202ENST00000328839 H7BYZ3 331 aa17.49■□□□□ 0.39
PPP4R4-202ENST00000328839 K7EPK0 472 aa17.49■□□□□ 0.39
PPP4R4-202ENST00000328839 PXDC1Q5TGL8 231 aa17.49■□□□□ 0.39
PPP4R4-202ENST00000328839 AGPAT2O15120 278 aa17.48■□□□□ 0.39
PPP4R4-202ENST00000328839 COX7A2P2O60397 106 aa17.48■□□□□ 0.39
PPP4R4-202ENST00000328839 TSC22D2O75157 780 aa17.48■□□□□ 0.39
PPP4R4-202ENST00000328839 KIR3DS1Q14943 382 aa17.48■□□□□ 0.39
PPP4R4-202ENST00000328839 BPIFA4PQ86YQ2 179 aa17.48■□□□□ 0.39
PPP4R4-202ENST00000328839 OR10J6PQ8NGY7 276 aa17.48■□□□□ 0.39
PPP4R4-202ENST00000328839 BAK1Q16611 211 aa17.47■□□□□ 0.39
PPP4R4-202ENST00000328839 CCDC28AQ8IWP9 274 aa17.47■□□□□ 0.39
PPP4R4-202ENST00000328839 ZBTB8BQ8NAP8 495 aaPredicted RBP17.47■□□□□ 0.39
PPP4R4-202ENST00000328839 GNPNAT1Q96EK6 184 aaPredicted RBP17.47■□□□□ 0.39
PPP4R4-202ENST00000328839 RCL1Q9Y2P8 373 aaKnown RBP17.47■□□□□ 0.39
PPP4R4-202ENST00000328839 J3KRW8 73 aa17.46■□□□□ 0.39
PPP4R4-202ENST00000328839 SLC17A3O00476 420 aa17.46■□□□□ 0.39
PPP4R4-202ENST00000328839 TAS2R30P59541 319 aa17.46■□□□□ 0.39
PPP4R4-202ENST00000328839 ARL16Q0P5N6 197 aa17.46■□□□□ 0.39
PPP4R4-202ENST00000328839 C20orf144Q9BQM9 153 aa17.46■□□□□ 0.39
PPP4R4-202ENST00000328839 TRAV26-1A0A087WT03 109 aa17.45■□□□□ 0.38
PPP4R4-202ENST00000328839 A0A0J9YY99 117 aa17.45■□□□□ 0.38
PPP4R4-202ENST00000328839 PRAC2D3DTV9 90 aa17.45■□□□□ 0.38
PPP4R4-202ENST00000328839 GFI1BQ5VTD9 330 aa17.45■□□□□ 0.38
PPP4R4-202ENST00000328839 Q9H8V8 135 aa17.45■□□□□ 0.38
PPP4R4-202ENST00000328839 GAGE12BA1L429 117 aa17.44■□□□□ 0.38
PPP4R4-202ENST00000328839 CENPXA8MT69 81 aa17.44■□□□□ 0.38
PPP4R4-202ENST00000328839 GAGE7O76087 117 aa17.44■□□□□ 0.38
PPP4R4-202ENST00000328839 GAGE12FP0CL80 117 aa17.44■□□□□ 0.38
PPP4R4-202ENST00000328839 GAGE12GP0CL81 117 aa17.44■□□□□ 0.38
PPP4R4-202ENST00000328839 GAGE12IP0CL82 117 aa17.44■□□□□ 0.38
PPP4R4-202ENST00000328839 MORN5Q5VZ52 161 aa17.44■□□□□ 0.38
PPP4R4-202ENST00000328839 C10orf113Q5VZT2 155 aa17.44■□□□□ 0.38
PPP4R4-202ENST00000328839 MGST2Q99735 147 aa17.44■□□□□ 0.38
PPP4R4-202ENST00000328839 C7orf66A4D0T2 115 aa17.43■□□□□ 0.38
PPP4R4-202ENST00000328839 SNURFLB1AK76 121 aa17.43■□□□□ 0.38
PPP4R4-202ENST00000328839 CDK2AP2O75956 126 aa17.43■□□□□ 0.38
PPP4R4-202ENST00000328839 RLN2P04090 185 aa17.43■□□□□ 0.38
PPP4R4-202ENST00000328839 M6PRP20645 277 aa17.43■□□□□ 0.38
PPP4R4-202ENST00000328839 OPCMLQ14982 345 aa17.43■□□□□ 0.38
PPP4R4-202ENST00000328839 MAPKAPK5-AS1Q8N8E1 139 aa17.43■□□□□ 0.38
PPP4R4-202ENST00000328839 TMEM37Q8WXS4 190 aa17.43■□□□□ 0.38
PPP4R4-202ENST00000328839 GGACTQ9BVM4 153 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms