RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 IGKV2-40A0A087WW87 121 aaPredicted RBP13.29□□□□□ -0.28
SFXN1-201ENST00000321442 KIR2DL5BA0A0G2JN68 375 aa13.29□□□□□ -0.28
SFXN1-201ENST00000321442 KIR2DL5BA0A0G2JPC4 375 aa13.29□□□□□ -0.28
SFXN1-201ENST00000321442 MMP23AO75900 390 aa13.29□□□□□ -0.28
SFXN1-201ENST00000321442 IGKV2D-40P01614 121 aaPredicted RBP13.29□□□□□ -0.28
SFXN1-201ENST00000321442 IGKV3-20P01619 116 aa13.29□□□□□ -0.28
SFXN1-201ENST00000321442 FAM106CPP0CH98 169 aa13.29□□□□□ -0.28
SFXN1-201ENST00000321442 LY6EQ16553 131 aa13.29□□□□□ -0.28
SFXN1-201ENST00000321442 LYZL1Q6UWQ5 148 aa13.29□□□□□ -0.28
SFXN1-201ENST00000321442 ZNF329Q86UD4 541 aa13.29□□□□□ -0.28
SFXN1-201ENST00000321442 KIR2DL5AQ8N109 375 aa13.29□□□□□ -0.28
SFXN1-201ENST00000321442 H0YJW9 148 aa13.29□□□□□ -0.28
SFXN1-201ENST00000321442 WNT2P09544 360 aa13.29□□□□□ -0.28
SFXN1-201ENST00000321442 SLC25A48Q6ZT89 311 aaKnown RBP13.29□□□□□ -0.28
SFXN1-201ENST00000321442 CRIP3Q6Q6R5 217 aa13.28□□□□□ -0.28
SFXN1-201ENST00000321442 AMN1Q8IY45 258 aa13.28□□□□□ -0.28
SFXN1-201ENST00000321442 FAM215AQ9Y5M1 114 aa13.28□□□□□ -0.28
SFXN1-201ENST00000321442 A0A0G2JLM5 398 aa13.28□□□□□ -0.28
SFXN1-201ENST00000321442 B9A039 149 aa13.28□□□□□ -0.28
SFXN1-201ENST00000321442 GRNP28799 593 aaKnown RBP13.28□□□□□ -0.28
SFXN1-201ENST00000321442 SEC11AP67812 179 aa13.28□□□□□ -0.28
SFXN1-201ENST00000321442 TMEM170BQ5T4T1 132 aa13.28□□□□□ -0.28
SFXN1-201ENST00000321442 RASL11AQ6T310 242 aa13.28□□□□□ -0.28
SFXN1-201ENST00000321442 FAM169BQ8N8A8 192 aa13.28□□□□□ -0.28
SFXN1-201ENST00000321442 RNASE6Q93091 150 aaKnown RBP13.28□□□□□ -0.28
SFXN1-201ENST00000321442 LOC105371242A0A075B767 164 aa13.28□□□□□ -0.28
SFXN1-201ENST00000321442 TIMM23O14925 209 aa13.28□□□□□ -0.28
SFXN1-201ENST00000321442 CENPVQ7Z7K6 275 aaPredicted RBP13.28□□□□□ -0.28
SFXN1-201ENST00000321442 TMEM167AQ8TBQ9 72 aa13.28□□□□□ -0.28
SFXN1-201ENST00000321442 VKORC1Q9BQB6 163 aa13.28□□□□□ -0.28
SFXN1-201ENST00000321442 MS4A6AQ9H2W1 248 aa13.28□□□□□ -0.28
SFXN1-201ENST00000321442 FABP5P3A8MUU1 101 aa13.27□□□□□ -0.28
SFXN1-201ENST00000321442 IFI27P40305 119 aaPredicted RBP13.27□□□□□ -0.28
SFXN1-201ENST00000321442 VWC2Q2TAL6 325 aa13.27□□□□□ -0.28
SFXN1-201ENST00000321442 GTSCR1Q86UQ5 136 aa13.27□□□□□ -0.28
SFXN1-201ENST00000321442 SCGB3A1Q96QR1 104 aa13.27□□□□□ -0.28
SFXN1-201ENST00000321442 MBD3L4A6NDZ8 208 aaPredicted RBP13.27□□□□□ -0.29
SFXN1-201ENST00000321442 MBD3L3A6NE82 208 aaPredicted RBP13.27□□□□□ -0.29
SFXN1-201ENST00000321442 MBD3L5A6NJ08 208 aaPredicted RBP13.27□□□□□ -0.29
SFXN1-201ENST00000321442 BCL6BQ8N143 479 aaPredicted RBP13.27□□□□□ -0.29
SFXN1-201ENST00000321442 MBD3L2Q8NHZ7 208 aaPredicted RBP13.27□□□□□ -0.29
SFXN1-201ENST00000321442 MRPL52Q86TS9 123 aaKnown RBP13.27□□□□□ -0.29
SFXN1-201ENST00000321442 ODF3L1Q8IXM7 274 aa13.27□□□□□ -0.29
SFXN1-201ENST00000321442 RNF138Q8WVD3 245 aa13.27□□□□□ -0.29
SFXN1-201ENST00000321442 A0A1B0GW15 77 aa13.26□□□□□ -0.29
SFXN1-201ENST00000321442 A0A1W2PPI3 338 aa13.26□□□□□ -0.29
SFXN1-201ENST00000321442 ATP5LO75964 103 aa13.26□□□□□ -0.29
SFXN1-201ENST00000321442 FAM71F2Q6NXP2 309 aa13.26□□□□□ -0.29
SFXN1-201ENST00000321442 CLEC2AQ6UVW9 174 aa13.26□□□□□ -0.29
SFXN1-201ENST00000321442 GAFA1Q96PS6 74 aa13.26□□□□□ -0.29
SFXN1-201ENST00000321442 SAMD13Q5VXD3 122 aa13.26□□□□□ -0.29
SFXN1-201ENST00000321442 SPRY4Q9C004 299 aa13.26□□□□□ -0.29
SFXN1-201ENST00000321442 CST9LQ9H4G1 147 aa13.26□□□□□ -0.29
SFXN1-201ENST00000321442 MUC22E2RYF6 1773 aaPredicted RBP13.26□□□□□ -0.29
SFXN1-201ENST00000321442 SRRM4A7MD48 611 aaKnown RBP13.26□□□□□ -0.29
SFXN1-201ENST00000321442 C15orf65H3BRN8 121 aa13.26□□□□□ -0.29
SFXN1-201ENST00000321442 SAMD5Q5TGI4 173 aa13.25□□□□□ -0.29
SFXN1-201ENST00000321442 C11orf1Q9H5F2 150 aa13.25□□□□□ -0.29
SFXN1-201ENST00000321442 CLEC19AQ6UXS0 136 aa13.25□□□□□ -0.29
SFXN1-201ENST00000321442 OR4X2Q8NGF9 303 aa13.25□□□□□ -0.29
SFXN1-201ENST00000321442 CFHR2P36980 270 aa13.25□□□□□ -0.29
SFXN1-201ENST00000321442 Q6ZSR3 168 aa13.25□□□□□ -0.29
SFXN1-201ENST00000321442 FREM2Q5SZK8 3169 aa13.25□□□□□ -0.29
SFXN1-201ENST00000321442 DSCAML1Q8TD84 2053 aa13.25□□□□□ -0.29
SFXN1-201ENST00000321442 HSD52Q0P140 79 aa13.24□□□□□ -0.29
SFXN1-201ENST00000321442 LYPD2Q6UXB3 125 aa13.24□□□□□ -0.29
SFXN1-201ENST00000321442 ARPC1AQ92747 370 aa13.24□□□□□ -0.29
SFXN1-201ENST00000321442 C11orf52Q96A22 123 aa13.24□□□□□ -0.29
SFXN1-201ENST00000321442 JMJD8Q96S16 334 aa13.24□□□□□ -0.29
SFXN1-201ENST00000321442 PDLIM4P50479 330 aa13.24□□□□□ -0.29
SFXN1-201ENST00000321442 KIR3DS1Q14943 382 aa13.24□□□□□ -0.29
SFXN1-201ENST00000321442 MYO15AQ9UKN7 3530 aa13.24□□□□□ -0.29
SFXN1-201ENST00000321442 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.24□□□□□ -0.29
SFXN1-201ENST00000321442 NBR2O15453 112 aa13.24□□□□□ -0.29
SFXN1-201ENST00000321442 SORL1Q92673 2214 aa13.24□□□□□ -0.29
SFXN1-201ENST00000321442 OCIAD2Q56VL3 154 aa13.24□□□□□ -0.29
SFXN1-201ENST00000321442 COX6B1P14854 86 aa13.23□□□□□ -0.29
SFXN1-201ENST00000321442 PRR20EP86478 221 aa13.23□□□□□ -0.29
SFXN1-201ENST00000321442 PRR20CP86479 221 aa13.23□□□□□ -0.29
SFXN1-201ENST00000321442 PRR20DP86480 221 aa13.23□□□□□ -0.29
SFXN1-201ENST00000321442 PRR20BP86481 221 aa13.23□□□□□ -0.29
SFXN1-201ENST00000321442 PRR20AP86496 221 aa13.23□□□□□ -0.29
SFXN1-201ENST00000321442 WT1-ASQ06250 92 aa13.23□□□□□ -0.29
SFXN1-201ENST00000321442 GLMPQ8WWB7 406 aa13.23□□□□□ -0.29
SFXN1-201ENST00000321442 GTSF1LQ9H1H1 148 aa13.23□□□□□ -0.29
SFXN1-201ENST00000321442 TANC2Q9HCD6 1990 aa13.23□□□□□ -0.29
SFXN1-201ENST00000321442 ACANP16112 2415 aa13.23□□□□□ -0.29
SFXN1-201ENST00000321442 CD5LO43866 347 aa13.23□□□□□ -0.29
SFXN1-201ENST00000321442 ARHGAP32A7KAX9 2087 aa13.23□□□□□ -0.29
SFXN1-201ENST00000321442 A0A1B0GWJ7 208 aa13.22□□□□□ -0.29
SFXN1-201ENST00000321442 TMEM213A2RRL7 107 aa13.22□□□□□ -0.29
SFXN1-201ENST00000321442 FAM231BA6NCW3 169 aa13.22□□□□□ -0.29
SFXN1-201ENST00000321442 IGHV1-8P0DP01 117 aa13.22□□□□□ -0.29
SFXN1-201ENST00000321442 GAGE1Q13065 139 aa13.22□□□□□ -0.29
SFXN1-201ENST00000321442 ZNF479Q96JC4 524 aa13.22□□□□□ -0.29
SFXN1-201ENST00000321442 TRGV9Q99603 122 aa13.22□□□□□ -0.29
SFXN1-201ENST00000321442 DPM2O94777 84 aa13.22□□□□□ -0.29
SFXN1-201ENST00000321442 ADIPOQQ15848 244 aa13.22□□□□□ -0.29
SFXN1-201ENST00000321442 SMAD7O15105 426 aaKnown RBP13.22□□□□□ -0.29
SFXN1-201ENST00000321442 TOMM40O96008 361 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms